RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
SCARB2-222ENST00000640634 ERICH6Q7L0X2 663 aa15.67■□□□□ 0.1
SCARB2-222ENST00000640634 ARHGEF28Q8N1W1 1705 aaKnown RBP15.66■□□□□ 0.1
SCARB2-222ENST00000640634 ABCC11Q96J66 1382 aa15.66■□□□□ 0.1
SCARB2-222ENST00000640634 RALGAPBQ86X10 1494 aa15.66■□□□□ 0.1
SCARB2-222ENST00000640634 SAFB2Q14151 953 aaKnown RBP eCLIP15.65■□□□□ 0.1
SCARB2-222ENST00000640634 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
SCARB2-222ENST00000640634 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.65■□□□□ 0.1
SCARB2-222ENST00000640634 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
SCARB2-222ENST00000640634 PRAM1Q96QH2 718 aa15.63■□□□□ 0.09
SCARB2-222ENST00000640634 C14orf37Q86TY3 774 aa15.63■□□□□ 0.09
SCARB2-222ENST00000640634 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
SCARB2-222ENST00000640634 GTF3C3Q9Y5Q9 886 aa15.62■□□□□ 0.09
SCARB2-222ENST00000640634 ADGRL3Q9HAR2 1447 aa15.61■□□□□ 0.09
SCARB2-222ENST00000640634 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
SCARB2-222ENST00000640634 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
SCARB2-222ENST00000640634 ILDR1Q86SU0 546 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-222ENST00000640634 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
SCARB2-222ENST00000640634 FAM135BQ49AJ0 1406 aa15.6■□□□□ 0.09
SCARB2-222ENST00000640634 HIRIP3Q9BW71 556 aaPredicted RBP15.59■□□□□ 0.09
SCARB2-222ENST00000640634 CARD11Q9BXL7 1154 aa15.59■□□□□ 0.09
SCARB2-222ENST00000640634 MSH6P52701 1360 aa15.59■□□□□ 0.09
SCARB2-222ENST00000640634 UBAP1LF5GYI3 381 aa15.58■□□□□ 0.08
SCARB2-222ENST00000640634 MINK1Q8N4C8 1332 aaPredicted RBP15.58■□□□□ 0.08
SCARB2-222ENST00000640634 POGKQ9P215 609 aa15.57■□□□□ 0.08
SCARB2-222ENST00000640634 QRICH2Q9H0J4 1663 aa15.57■□□□□ 0.08
SCARB2-222ENST00000640634 NCOA3Q9Y6Q9 1424 aa15.56■□□□□ 0.08
SCARB2-222ENST00000640634 C19orf44Q9H6X5 657 aa15.56■□□□□ 0.08
SCARB2-222ENST00000640634 CDC42BPGQ6DT37 1551 aa15.56■□□□□ 0.08
SCARB2-222ENST00000640634 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
SCARB2-222ENST00000640634 PIP4K2BP78356 416 aa15.55■□□□□ 0.08
SCARB2-222ENST00000640634 SIRT1Q96EB6 747 aa15.54■□□□□ 0.08
SCARB2-222ENST00000640634 MST1RQ04912 1400 aa15.53■□□□□ 0.08
SCARB2-222ENST00000640634 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
SCARB2-222ENST00000640634 ADGRB2O60241 1585 aa15.53■□□□□ 0.08
SCARB2-222ENST00000640634 FBXO41Q8TF61 875 aa15.53■□□□□ 0.08
SCARB2-222ENST00000640634 CENPJQ9HC77 1338 aaPredicted RBP15.53■□□□□ 0.08
SCARB2-222ENST00000640634 FMN2Q9NZ56 1722 aa15.53■□□□□ 0.08
SCARB2-222ENST00000640634 ATF3P18847 181 aa15.52■□□□□ 0.08
SCARB2-222ENST00000640634 DCCP43146 1447 aa15.52■□□□□ 0.08
SCARB2-222ENST00000640634 TULP4Q9NRJ4 1543 aa15.52■□□□□ 0.07
SCARB2-222ENST00000640634 USP47Q96K76 1375 aa15.52■□□□□ 0.07
SCARB2-222ENST00000640634 USP32Q8NFA0 1604 aa15.51■□□□□ 0.07
SCARB2-222ENST00000640634 ROBO1Q9Y6N7 1651 aa15.51■□□□□ 0.07
SCARB2-222ENST00000640634 TOM1O60784 492 aa15.5■□□□□ 0.07
SCARB2-222ENST00000640634 CADPS2Q86UW7 1296 aa15.5■□□□□ 0.07
SCARB2-222ENST00000640634 SLAIN2Q9P270 581 aa15.5■□□□□ 0.07
SCARB2-222ENST00000640634 RGPD8O14715 1765 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-222ENST00000640634 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
SCARB2-222ENST00000640634 ST20-MTHFSA0A0A6YYL1 179 aa15.48■□□□□ 0.07
SCARB2-222ENST00000640634 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
SCARB2-222ENST00000640634 EIF3AQ14152 1382 aaKnown RBP15.48■□□□□ 0.07
SCARB2-222ENST00000640634 ORAI2Q96SN7 254 aa15.48■□□□□ 0.07
SCARB2-222ENST00000640634 DDX17Q92841 729 aaKnown RBP15.47■□□□□ 0.07
SCARB2-222ENST00000640634 FOXD4L1Q9NU39 408 aa15.47■□□□□ 0.07
SCARB2-222ENST00000640634 WASLO00401 505 aaPredicted RBP15.46■□□□□ 0.07
SCARB2-222ENST00000640634 ATP7BP35670 1465 aa15.46■□□□□ 0.06
SCARB2-222ENST00000640634 BRINP3Q76B58 766 aa15.46■□□□□ 0.06
SCARB2-222ENST00000640634 TESK2Q96S53 571 aa15.46■□□□□ 0.06
SCARB2-222ENST00000640634 CDK19Q9BWU1 502 aa15.45■□□□□ 0.06
SCARB2-222ENST00000640634 CABP2Q9NPB3 220 aa15.45■□□□□ 0.06
SCARB2-222ENST00000640634 HSPA5P11021 654 aaKnown RBP15.43■□□□□ 0.06
SCARB2-222ENST00000640634 DISP3Q9P2K9 1392 aa15.43■□□□□ 0.06
SCARB2-222ENST00000640634 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
SCARB2-222ENST00000640634 TOPAZ1Q8N9V7 1692 aa15.42■□□□□ 0.06
SCARB2-222ENST00000640634 HSPA1LP34931 641 aa15.42■□□□□ 0.06
SCARB2-222ENST00000640634 SBNO2Q9Y2G9 1366 aa15.41■□□□□ 0.06
SCARB2-222ENST00000640634 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
SCARB2-222ENST00000640634 XPCQ01831 940 aaPredicted RBP15.4■□□□□ 0.06
SCARB2-222ENST00000640634 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
SCARB2-222ENST00000640634 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
SCARB2-222ENST00000640634 NHSL1Q5SYE7 1610 aa15.4■□□□□ 0.06
SCARB2-222ENST00000640634 ANKARQ7Z5J8 1434 aa15.4■□□□□ 0.06
SCARB2-222ENST00000640634 PHLPP1O60346 1717 aa15.38■□□□□ 0.05
SCARB2-222ENST00000640634 EVC2Q86UK5 1308 aa15.38■□□□□ 0.05
SCARB2-222ENST00000640634 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
SCARB2-222ENST00000640634 COL16A1Q07092 1604 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-222ENST00000640634 AHDC1Q5TGY3 1603 aaPredicted RBP15.38■□□□□ 0.05
SCARB2-222ENST00000640634 FOXO3O43524 673 aa15.37■□□□□ 0.05
SCARB2-222ENST00000640634 ITSN1Q15811 1721 aa15.37■□□□□ 0.05
SCARB2-222ENST00000640634 PHF8Q9UPP1 1060 aa15.37■□□□□ 0.05
SCARB2-222ENST00000640634 KIF1AQ12756 1690 aa15.37■□□□□ 0.05
SCARB2-222ENST00000640634 PPIP5K1Q6PFW1 1433 aa15.36■□□□□ 0.05
SCARB2-222ENST00000640634 PXDNQ92626 1479 aa15.35■□□□□ 0.05
SCARB2-222ENST00000640634 C11orf95C9JLR9 678 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-222ENST00000640634 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
SCARB2-222ENST00000640634 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
SCARB2-222ENST00000640634 MYOM1P52179 1685 aa15.32■□□□□ 0.04
SCARB2-222ENST00000640634 TMF1P82094 1093 aa15.31■□□□□ 0.04
SCARB2-222ENST00000640634 ACEP12821 1306 aa15.31■□□□□ 0.04
SCARB2-222ENST00000640634 CD163L1Q9NR16 1453 aa15.31■□□□□ 0.04
SCARB2-222ENST00000640634 PELP1Q8IZL8 1130 aaKnown RBP15.31■□□□□ 0.04
SCARB2-222ENST00000640634 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-222ENST00000640634 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-222ENST00000640634 NGDNQ8NEJ9 315 aaKnown RBP15.3■□□□□ 0.04
SCARB2-222ENST00000640634 POLR3GLQ9BT43 218 aa15.3■□□□□ 0.04
SCARB2-222ENST00000640634 SLC12A5Q9H2X9 1139 aa15.3■□□□□ 0.04
SCARB2-222ENST00000640634 PODXL2Q9NZ53 605 aa15.3■□□□□ 0.04
SCARB2-222ENST00000640634 NPHP3Q7Z494 1330 aa15.3■□□□□ 0.04
SCARB2-222ENST00000640634 POLR3AO14802 1390 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms