RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ESCO1Q5FWF5 840 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 PKNOX2Q96KN3 472 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 PNNQ9H307 717 aaKnown RBP7.44□□□□□ -1.22
RTTN-218ENST00000640408 CGNL1Q0VF96 1302 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 ADAMTSL3P82987 1691 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 NLRP13Q86W25 1043 aa7.44□□□□□ -1.22
RTTN-218ENST00000640408 FAM135BQ49AJ0 1406 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 NEURL4Q96JN8 1562 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 DDRGK1Q96HY6 314 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 WASHC2AQ641Q2 1341 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 BRD4O60885 1362 aaPredicted RBP7.43□□□□□ -1.22
RTTN-218ENST00000640408 SBNO2Q9Y2G9 1366 aa7.43□□□□□ -1.22
RTTN-218ENST00000640408 CDK19Q9BWU1 502 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 NOP58Q9Y2X3 529 aaKnown RBP7.42□□□□□ -1.22
RTTN-218ENST00000640408 SYNMO15061 1565 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 NBPF8Q3BBV2 869 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 NUDT16Q96DE0 195 aaKnown RBP7.42□□□□□ -1.22
RTTN-218ENST00000640408 ARHGAP23Q9P227 1491 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 CFAP65Q6ZU64 1925 aaKnown RBP7.42□□□□□ -1.22
RTTN-218ENST00000640408 RALGAPBQ86X10 1494 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 COG3Q96JB2 828 aa7.42□□□□□ -1.22
RTTN-218ENST00000640408 HSP90AA1P07900 732 aaKnown RBP7.41□□□□□ -1.22
RTTN-218ENST00000640408 KIF1BO60333 1816 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 HMGB2P26583 209 aaKnown RBP7.41□□□□□ -1.22
RTTN-218ENST00000640408 HIRIP3Q9BW71 556 aaPredicted RBP7.41□□□□□ -1.22
RTTN-218ENST00000640408 TMEM94Q12767 1356 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 SLIT1O75093 1534 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 LRRC59Q96AG4 307 aaKnown RBP7.41□□□□□ -1.22
RTTN-218ENST00000640408 RSPH6AQ9H0K4 717 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 MORC1Q86VD1 984 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 CERKQ8TCT0 537 aa7.41□□□□□ -1.22
RTTN-218ENST00000640408 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.41□□□□□ -1.22
RTTN-218ENST00000640408 KCNH5Q8NCM2 988 aa7.4□□□□□ -1.22
RTTN-218ENST00000640408 CEP152O94986 1710 aa7.4□□□□□ -1.22
RTTN-218ENST00000640408 SLAIN2Q9P270 581 aa7.4□□□□□ -1.22
RTTN-218ENST00000640408 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
RTTN-218ENST00000640408 NKTRP30414 1462 aaKnown RBP7.4□□□□□ -1.23
RTTN-218ENST00000640408 PREX1Q8TCU6 1659 aa7.4□□□□□ -1.23
RTTN-218ENST00000640408 MROH1Q8NDA8 1641 aa7.4□□□□□ -1.23
RTTN-218ENST00000640408 NUTM2FA1L443 756 aa7.4□□□□□ -1.23
RTTN-218ENST00000640408 WAPLQ7Z5K2 1190 aa7.4□□□□□ -1.23
RTTN-218ENST00000640408 SPHKAPQ2M3C7 1700 aa7.4□□□□□ -1.23
RTTN-218ENST00000640408 RALBP1Q15311 655 aa7.39□□□□□ -1.23
RTTN-218ENST00000640408 DIP2AQ14689 1571 aa7.39□□□□□ -1.23
RTTN-218ENST00000640408 TTC21AQ8NDW8 1320 aa7.39□□□□□ -1.23
RTTN-218ENST00000640408 DDX10Q13206 875 aaKnown RBP7.39□□□□□ -1.23
RTTN-218ENST00000640408 PIK3C2GO75747 1445 aa7.39□□□□□ -1.23
RTTN-218ENST00000640408 PIP4K2BP78356 416 aa7.38□□□□□ -1.23
RTTN-218ENST00000640408 MEX3CQ5U5Q3 659 aaKnown RBP7.38□□□□□ -1.23
RTTN-218ENST00000640408 E9PCH4 1651 aa7.38□□□□□ -1.23
RTTN-218ENST00000640408 CPS1P31327 1500 aa7.38□□□□□ -1.23
RTTN-218ENST00000640408 NLRP6P59044 892 aa7.38□□□□□ -1.23
RTTN-218ENST00000640408 ZNF335Q9H4Z2 1342 aaPredicted RBP7.38□□□□□ -1.23
RTTN-218ENST00000640408 KTN1Q86UP2 1357 aaKnown RBP7.38□□□□□ -1.23
RTTN-218ENST00000640408 MED14O60244 1454 aa7.38□□□□□ -1.23
RTTN-218ENST00000640408 WDR43Q15061 677 aaKnown RBP eCLIP7.37□□□□□ -1.23
RTTN-218ENST00000640408 PTCH1Q13635 1447 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 AMPHP49418 695 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 CABP2Q9NPB3 220 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 MYO3AQ8NEV4 1616 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 PLEKHG3A1L390 1219 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 CSB-PGBD3P0DP91 1061 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 ABTB2Q8N961 1025 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 KRT28Q7Z3Y7 464 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 CHMP4AQ9BY43 222 aa7.37□□□□□ -1.23
RTTN-218ENST00000640408 ADGRL3Q9HAR2 1447 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 CABP1Q9NZU7 370 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 ARHGEF10O15013 1369 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 DCCP43146 1447 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 METP08581 1390 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 CLTCL1P53675 1640 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 KDM5AP29375 1690 aaKnown RBP7.36□□□□□ -1.23
RTTN-218ENST00000640408 FOXO3O43524 673 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 ANKARQ7Z5J8 1434 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 PHF23Q9BUL5 403 aaPredicted RBP7.36□□□□□ -1.23
RTTN-218ENST00000640408 PIK3C2BO00750 1634 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 C3P01024 1663 aa7.36□□□□□ -1.23
RTTN-218ENST00000640408 CNGB1Q14028 1251 aaPredicted RBP7.35□□□□□ -1.23
RTTN-218ENST00000640408 TECPR2O15040 1411 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 ZBTB7CA1YPR0 619 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 EVA1CP58658 441 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 NSD2O96028 1365 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 ADAMTS13Q76LX8 1427 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 LAMC1P11047 1609 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 PMFBP1Q8TBY8 1022 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 PRDM11Q9NQV5 511 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 RBM19Q9Y4C8 960 aaKnown RBP7.35□□□□□ -1.23
RTTN-218ENST00000640408 VSIG10Q8N0Z9 540 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 MIER1Q8N108 512 aa7.35□□□□□ -1.23
RTTN-218ENST00000640408 PANK3Q9H999 370 aa7.34□□□□□ -1.23
RTTN-218ENST00000640408 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
RTTN-218ENST00000640408 CCDC7Q96M83 1385 aa7.34□□□□□ -1.23
RTTN-218ENST00000640408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.33□□□□□ -1.24
RTTN-218ENST00000640408 DLC1Q96QB1 1528 aa7.33□□□□□ -1.24
RTTN-218ENST00000640408 CCDC9Q9Y3X0 531 aaKnown RBP7.33□□□□□ -1.24
RTTN-218ENST00000640408 CCDC136Q96JN2 1154 aa7.33□□□□□ -1.24
RTTN-218ENST00000640408 NGEFQ8N5V2 710 aa7.33□□□□□ -1.24
RTTN-218ENST00000640408 SLC12A5Q9H2X9 1139 aa7.33□□□□□ -1.24
RTTN-218ENST00000640408 NEXMIFQ5QGS0 1516 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms