RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
NECAP1-218ENST00000639595 NUTM2DQ5VT03 806 aaPredicted RBP11.37□□□□□ -0.59
NECAP1-218ENST00000639595 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
NECAP1-218ENST00000639595 FBXO31Q5XUX0 539 aaPredicted RBP11.36□□□□□ -0.59
NECAP1-218ENST00000639595 EXOC6Q8TAG9 804 aa11.36□□□□□ -0.59
NECAP1-218ENST00000639595 SLFN5Q08AF3 891 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 ANKRD36BQ8N2N9 1353 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
NECAP1-218ENST00000639595 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
NECAP1-218ENST00000639595 NSD2O96028 1365 aa11.34□□□□□ -0.59
NECAP1-218ENST00000639595 APAF1O14727 1248 aa11.33□□□□□ -0.6
NECAP1-218ENST00000639595 ANP32EQ9BTT0 268 aa11.33□□□□□ -0.6
NECAP1-218ENST00000639595 PTPRMP28827 1452 aa11.32□□□□□ -0.6
NECAP1-218ENST00000639595 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
NECAP1-218ENST00000639595 CCDC146Q8IYE0 955 aa11.32□□□□□ -0.6
NECAP1-218ENST00000639595 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
NECAP1-218ENST00000639595 E9PSI1 815 aa11.3□□□□□ -0.6
NECAP1-218ENST00000639595 PLIN1O60240 522 aa11.3□□□□□ -0.6
NECAP1-218ENST00000639595 SPATA31D1Q6ZQQ2 1576 aa11.3□□□□□ -0.6
NECAP1-218ENST00000639595 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
NECAP1-218ENST00000639595 STK26Q9P289 416 aa11.3□□□□□ -0.6
NECAP1-218ENST00000639595 A2ML1A8K2U0 1454 aa11.29□□□□□ -0.6
NECAP1-218ENST00000639595 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
NECAP1-218ENST00000639595 ALKQ9UM73 1620 aa11.29□□□□□ -0.6
NECAP1-218ENST00000639595 MTHFSP49914 203 aa11.29□□□□□ -0.6
NECAP1-218ENST00000639595 PRAM1Q96QH2 718 aa11.29□□□□□ -0.6
NECAP1-218ENST00000639595 SPINK5Q9NQ38 1064 aaPredicted RBP11.29□□□□□ -0.6
NECAP1-218ENST00000639595 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
NECAP1-218ENST00000639595 CRBNQ96SW2 442 aa11.28□□□□□ -0.6
NECAP1-218ENST00000639595 STAG3Q9UJ98 1225 aa11.28□□□□□ -0.6
NECAP1-218ENST00000639595 NKTRP30414 1462 aaKnown RBP11.28□□□□□ -0.6
NECAP1-218ENST00000639595 MYO5BQ9ULV0 1848 aa11.28□□□□□ -0.6
NECAP1-218ENST00000639595 MSH5O43196 834 aa11.27□□□□□ -0.6
NECAP1-218ENST00000639595 SAFB2Q14151 953 aaKnown RBP eCLIP11.27□□□□□ -0.6
NECAP1-218ENST00000639595 WWC1Q8IX03 1113 aa11.27□□□□□ -0.6
NECAP1-218ENST00000639595 CFAP53Q96M91 514 aa11.27□□□□□ -0.6
NECAP1-218ENST00000639595 A0A1W2PP64 1363 aa11.27□□□□□ -0.61
NECAP1-218ENST00000639595 SRPK2P78362 688 aaKnown RBP11.27□□□□□ -0.61
NECAP1-218ENST00000639595 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.27□□□□□ -0.61
NECAP1-218ENST00000639595 TERF2IPQ9NYB0 399 aa11.27□□□□□ -0.61
NECAP1-218ENST00000639595 POGKQ9P215 609 aa11.27□□□□□ -0.61
NECAP1-218ENST00000639595 TCERG1O14776 1098 aaKnown RBP11.26□□□□□ -0.61
NECAP1-218ENST00000639595 TNNT2P45379 298 aaPredicted RBP11.26□□□□□ -0.61
NECAP1-218ENST00000639595 C20orf194Q5TEA3 1177 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 MED14O60244 1454 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 CCDC27Q2M243 656 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 TSPOAP1O95153 1857 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 SHPRHQ149N8 1683 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 RIMS2Q9UQ26 1411 aa11.26□□□□□ -0.61
NECAP1-218ENST00000639595 DMRT2Q9Y5R5 561 aa11.25□□□□□ -0.61
NECAP1-218ENST00000639595 CD163L1Q9NR16 1453 aa11.25□□□□□ -0.61
NECAP1-218ENST00000639595 CLTCQ00610 1675 aaKnown RBP11.25□□□□□ -0.61
NECAP1-218ENST00000639595 MINK1Q8N4C8 1332 aaPredicted RBP11.25□□□□□ -0.61
NECAP1-218ENST00000639595 FYB1O15117 783 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.24□□□□□ -0.61
NECAP1-218ENST00000639595 CDK19Q9BWU1 502 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 ZMYM3Q14202 1370 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 IQSEC2Q5JU85 1478 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 MS4A1P11836 297 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 NLRP1Q9C000 1473 aa11.24□□□□□ -0.61
NECAP1-218ENST00000639595 KDM2BQ8NHM5 1336 aa11.23□□□□□ -0.61
NECAP1-218ENST00000639595 MLECQ14165 292 aa11.23□□□□□ -0.61
NECAP1-218ENST00000639595 SIRT1Q96EB6 747 aa11.23□□□□□ -0.61
NECAP1-218ENST00000639595 HDGFL2Q7Z4V5 671 aaPredicted RBP11.22□□□□□ -0.61
NECAP1-218ENST00000639595 HDGFP51858 240 aaKnown RBP11.21□□□□□ -0.61
NECAP1-218ENST00000639595 GGNBP2Q9H3C7 697 aa11.21□□□□□ -0.61
NECAP1-218ENST00000639595 CABP1Q9NZU7 370 aa11.21□□□□□ -0.61
NECAP1-218ENST00000639595 PNPLA6Q8IY17 1366 aa11.21□□□□□ -0.62
NECAP1-218ENST00000639595 KIF13AQ9H1H9 1805 aa11.2□□□□□ -0.62
NECAP1-218ENST00000639595 BCAR3O75815 825 aa11.2□□□□□ -0.62
NECAP1-218ENST00000639595 PDE3AQ14432 1141 aa11.2□□□□□ -0.62
NECAP1-218ENST00000639595 WAPLQ7Z5K2 1190 aa11.2□□□□□ -0.62
NECAP1-218ENST00000639595 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
NECAP1-218ENST00000639595 SETD1AO15047 1707 aaKnown RBP11.2□□□□□ -0.62
NECAP1-218ENST00000639595 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-218ENST00000639595 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
NECAP1-218ENST00000639595 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
NECAP1-218ENST00000639595 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
NECAP1-218ENST00000639595 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
NECAP1-218ENST00000639595 TECPR2O15040 1411 aa11.19□□□□□ -0.62
NECAP1-218ENST00000639595 RRP7AQ9Y3A4 280 aaKnown RBP11.19□□□□□ -0.62
NECAP1-218ENST00000639595 METP08581 1390 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 ATP7BP35670 1465 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 TNRQ92752 1358 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 BACH2Q9BYV9 841 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 DNAJC5Q9H3Z4 198 aa11.18□□□□□ -0.62
NECAP1-218ENST00000639595 NRXN3Q9Y4C0 1643 aa11.17□□□□□ -0.62
NECAP1-218ENST00000639595 WASLO00401 505 aaPredicted RBP11.17□□□□□ -0.62
NECAP1-218ENST00000639595 PDE4AP27815 886 aa11.17□□□□□ -0.62
NECAP1-218ENST00000639595 RARSP54136 660 aaKnown RBP11.17□□□□□ -0.62
NECAP1-218ENST00000639595 NEUROD2Q15784 382 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms