RNA–Protein interactions for RNA: ENST00000639453.1

CCDC7-214, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-214ENST00000639453 PRDM9Q9NQV7 894 aa10.38□□□□□ -0.75
CCDC7-214ENST00000639453 KDM4AO75164 1064 aa10.37□□□□□ -0.75
CCDC7-214ENST00000639453 USP46P62068 366 aa10.37□□□□□ -0.75
CCDC7-214ENST00000639453 TREML4Q6UXN2 200 aa10.37□□□□□ -0.75
CCDC7-214ENST00000639453 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
CCDC7-214ENST00000639453 WNT7AO00755 349 aa10.36□□□□□ -0.75
CCDC7-214ENST00000639453 MAP2K5Q13163 448 aa10.36□□□□□ -0.75
CCDC7-214ENST00000639453 SNIP1Q8TAD8 396 aaKnown RBP10.36□□□□□ -0.75
CCDC7-214ENST00000639453 USB1Q9BQ65 265 aaKnown RBP10.36□□□□□ -0.75
CCDC7-214ENST00000639453 REPIN1Q9BWE0 567 aaKnown RBP10.36□□□□□ -0.75
CCDC7-214ENST00000639453 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
CCDC7-214ENST00000639453 TRIM32Q13049 653 aa10.35□□□□□ -0.75
CCDC7-214ENST00000639453 CD46P15529 392 aa10.34□□□□□ -0.75
CCDC7-214ENST00000639453 KRI1Q8N9T8 703 aaKnown RBP10.34□□□□□ -0.75
CCDC7-214ENST00000639453 MMP16P51512 607 aa10.33□□□□□ -0.76
CCDC7-214ENST00000639453 CCDC24Q8N4L8 307 aa10.33□□□□□ -0.76
CCDC7-214ENST00000639453 IRF6O14896 467 aa10.31□□□□□ -0.76
CCDC7-214ENST00000639453 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
CCDC7-214ENST00000639453 GMPR2Q9P2T1 348 aaKnown RBP10.31□□□□□ -0.76
CCDC7-214ENST00000639453 MINK1Q8N4C8 1332 aaPredicted RBP10.31□□□□□ -0.76
CCDC7-214ENST00000639453 WFS1O76024 890 aa10.29□□□□□ -0.76
CCDC7-214ENST00000639453 MDM2Q00987 491 aaPredicted RBP10.29□□□□□ -0.76
CCDC7-214ENST00000639453 MRGPRX2Q96LB1 330 aa10.29□□□□□ -0.76
CCDC7-214ENST00000639453 DACH1Q9UI36 760 aa10.29□□□□□ -0.76
CCDC7-214ENST00000639453 DXOO77932 396 aaKnown RBP10.28□□□□□ -0.76
CCDC7-214ENST00000639453 CLCN1P35523 988 aa10.27□□□□□ -0.77
CCDC7-214ENST00000639453 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
CCDC7-214ENST00000639453 SMPD1P17405 629 aa10.26□□□□□ -0.77
CCDC7-214ENST00000639453 WNT7BP56706 349 aa10.26□□□□□ -0.77
CCDC7-214ENST00000639453 GPCPD1Q9NPB8 672 aa10.25□□□□□ -0.77
CCDC7-214ENST00000639453 ATP13A2Q9NQ11 1180 aa10.25□□□□□ -0.77
CCDC7-214ENST00000639453 HOXA2O43364 376 aa10.24□□□□□ -0.77
CCDC7-214ENST00000639453 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
CCDC7-214ENST00000639453 KIFC2Q96AC6 838 aa10.24□□□□□ -0.77
CCDC7-214ENST00000639453 J3QL48 77 aa10.23□□□□□ -0.77
CCDC7-214ENST00000639453 INSM1Q01101 510 aaPredicted RBP10.22□□□□□ -0.77
CCDC7-214ENST00000639453 JUNDP17535 347 aa10.21□□□□□ -0.77
CCDC7-214ENST00000639453 ALDH1A1P00352 501 aa10.2□□□□□ -0.78
CCDC7-214ENST00000639453 RETREG3Q86VR2 466 aa10.2□□□□□ -0.78
CCDC7-214ENST00000639453 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
CCDC7-214ENST00000639453 TRIM47Q96LD4 638 aa10.2□□□□□ -0.78
CCDC7-214ENST00000639453 LCE2AQ5TA79 106 aaPredicted RBP10.19□□□□□ -0.78
CCDC7-214ENST00000639453 NUDT12Q9BQG2 462 aa10.19□□□□□ -0.78
CCDC7-214ENST00000639453 VSIG10Q8N0Z9 540 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 HPS1Q92902 700 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 HLA-CQ95604 372 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 FAM217BQ9NTX9 383 aaPredicted RBP10.18□□□□□ -0.78
CCDC7-214ENST00000639453 KDM2AQ9Y2K7 1162 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 WASF2Q9Y6W5 498 aa10.18□□□□□ -0.78
CCDC7-214ENST00000639453 C6orf229H3BNL8 230 aa10.17□□□□□ -0.78
CCDC7-214ENST00000639453 STK17AQ9UEE5 414 aa10.17□□□□□ -0.78
CCDC7-214ENST00000639453 SLC16A10Q8TF71 515 aa10.16□□□□□ -0.78
CCDC7-214ENST00000639453 TERTO14746 1132 aaKnown RBP10.15□□□□□ -0.78
CCDC7-214ENST00000639453 FDX1P10109 184 aa10.15□□□□□ -0.78
CCDC7-214ENST00000639453 GUCA2AQ02747 115 aa10.15□□□□□ -0.78
CCDC7-214ENST00000639453 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
CCDC7-214ENST00000639453 MS4A1P11836 297 aa10.14□□□□□ -0.79
CCDC7-214ENST00000639453 SNRPBP14678 240 aaKnown RBP10.14□□□□□ -0.79
CCDC7-214ENST00000639453 SKOR1P84550 965 aa10.14□□□□□ -0.79
CCDC7-214ENST00000639453 WIPF1O43516 503 aa10.13□□□□□ -0.79
CCDC7-214ENST00000639453 CCNYL3P0C7X3 344 aa10.13□□□□□ -0.79
CCDC7-214ENST00000639453 SYMPKQ92797 1274 aaKnown RBP10.13□□□□□ -0.79
CCDC7-214ENST00000639453 PLEKHG3A1L390 1219 aa10.1□□□□□ -0.79
CCDC7-214ENST00000639453 FAM181BA6NEQ2 426 aa10.1□□□□□ -0.79
CCDC7-214ENST00000639453 CAPN5O15484 640 aaPredicted RBP10.1□□□□□ -0.79
CCDC7-214ENST00000639453 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
CCDC7-214ENST00000639453 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
CCDC7-214ENST00000639453 SPDYE5A6NIY4 337 aa10.09□□□□□ -0.79
CCDC7-214ENST00000639453 PTPRNQ16849 979 aa10.08□□□□□ -0.8
CCDC7-214ENST00000639453 PTCRAQ6ISU1 281 aaPredicted RBP10.07□□□□□ -0.8
CCDC7-214ENST00000639453 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
CCDC7-214ENST00000639453 EVA1BQ9NVM1 165 aa10.06□□□□□ -0.8
CCDC7-214ENST00000639453 NXF1Q9UBU9 619 aaKnown RBP10.06□□□□□ -0.8
CCDC7-214ENST00000639453 SIAH2O43255 324 aa10.05□□□□□ -0.8
CCDC7-214ENST00000639453 SH3BP2P78314 561 aa10.05□□□□□ -0.8
CCDC7-214ENST00000639453 MTMR2Q13614 643 aa10.05□□□□□ -0.8
CCDC7-214ENST00000639453 SPIRE2Q8WWL2 714 aa10.05□□□□□ -0.8
CCDC7-214ENST00000639453 UNC93B1Q9H1C4 597 aa10.05□□□□□ -0.8
CCDC7-214ENST00000639453 VARSP26640 1264 aaKnown RBP10.04□□□□□ -0.8
CCDC7-214ENST00000639453 NPAS3Q8IXF0 933 aa10.04□□□□□ -0.8
CCDC7-214ENST00000639453 PRR7Q8TB68 274 aa10.04□□□□□ -0.8
CCDC7-214ENST00000639453 IRF7Q92985 503 aa10.04□□□□□ -0.8
CCDC7-214ENST00000639453 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
CCDC7-214ENST00000639453 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
CCDC7-214ENST00000639453 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
CCDC7-214ENST00000639453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.03□□□□□ -0.8
CCDC7-214ENST00000639453 BAP1Q92560 729 aa10.02□□□□□ -0.81
CCDC7-214ENST00000639453 BMP1P13497 986 aa10.01□□□□□ -0.81
CCDC7-214ENST00000639453 SCARF1Q14162 830 aa10.01□□□□□ -0.81
CCDC7-214ENST00000639453 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
CCDC7-214ENST00000639453 MOXD2PA6NHM9 499 aa10□□□□□ -0.81
CCDC7-214ENST00000639453 NDUFV2P19404 249 aa10□□□□□ -0.81
CCDC7-214ENST00000639453 CTHP32929 405 aa10□□□□□ -0.81
CCDC7-214ENST00000639453 ZNF511Q8NB15 262 aa10□□□□□ -0.81
CCDC7-214ENST00000639453 GJA5P36382 358 aa9.99□□□□□ -0.81
CCDC7-214ENST00000639453 MPNDQ8N594 471 aa9.99□□□□□ -0.81
CCDC7-214ENST00000639453 FAM174AQ8TBP5 190 aa9.99□□□□□ -0.81
CCDC7-214ENST00000639453 BEGAINQ9BUH8 593 aa9.98□□□□□ -0.81
CCDC7-214ENST00000639453 NNTQ13423 1086 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms