RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 CSB-PGBD3P0DP91 1061 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 ABL2P42684 1182 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 CFDP1Q9UEE9 299 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-209ENST00000638409 DENND4BO75064 1496 aaPredicted RBP11.04□□□□□ -0.64
SCARB2-209ENST00000638409 PPARGC1BQ86YN6 1023 aaKnown RBP11.04□□□□□ -0.64
SCARB2-209ENST00000638409 RNF39Q9H2S5 420 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 FRMPD1Q5SYB0 1578 aa11.04□□□□□ -0.64
SCARB2-209ENST00000638409 SCAPERQ9BY12 1400 aa11.03□□□□□ -0.64
SCARB2-209ENST00000638409 SOX12O15370 315 aa11.03□□□□□ -0.64
SCARB2-209ENST00000638409 TBC1D12O60347 775 aa11.03□□□□□ -0.64
SCARB2-209ENST00000638409 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
SCARB2-209ENST00000638409 HIC1Q14526 733 aa11.02□□□□□ -0.64
SCARB2-209ENST00000638409 TXNDC2Q86VQ3 553 aa11.02□□□□□ -0.64
SCARB2-209ENST00000638409 POGZQ7Z3K3 1410 aa11.02□□□□□ -0.65
SCARB2-209ENST00000638409 ZMYM4Q5VZL5 1548 aa11.02□□□□□ -0.65
SCARB2-209ENST00000638409 SRPK2P78362 688 aaKnown RBP11.02□□□□□ -0.65
SCARB2-209ENST00000638409 ADAMTS19Q8TE59 1207 aa11.02□□□□□ -0.65
SCARB2-209ENST00000638409 ARHGEF12Q9NZN5 1544 aa11.02□□□□□ -0.65
SCARB2-209ENST00000638409 KDM5CP41229 1560 aa11.01□□□□□ -0.65
SCARB2-209ENST00000638409 BEGAINQ9BUH8 593 aa11.01□□□□□ -0.65
SCARB2-209ENST00000638409 ZNF518AQ6AHZ1 1483 aa11.01□□□□□ -0.65
SCARB2-209ENST00000638409 PRR29P0C7W0 189 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 RFC5P40937 340 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 CFAP70Q5T0N1 1121 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 CAMSAP2Q08AD1 1489 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 MBD5Q9P267 1494 aa11□□□□□ -0.65
SCARB2-209ENST00000638409 TCOF1Q13428 1488 aaKnown RBP10.99□□□□□ -0.65
SCARB2-209ENST00000638409 RAPGEF3O95398 923 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 MDM2Q00987 491 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-209ENST00000638409 TBC1D2BQ9UPU7 963 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 SYCP2Q9BX26 1530 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 FGD6Q6ZV73 1430 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 ARHGEF5Q12774 1597 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 SPDYE16A6NNV3 312 aaPredicted RBP10.99□□□□□ -0.65
SCARB2-209ENST00000638409 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
SCARB2-209ENST00000638409 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
SCARB2-209ENST00000638409 TRAPPC8Q9Y2L5 1435 aa10.98□□□□□ -0.65
SCARB2-209ENST00000638409 MLH3Q9UHC1 1453 aa10.97□□□□□ -0.65
SCARB2-209ENST00000638409 ZNF644Q9H582 1327 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-209ENST00000638409 OSBPP22059 807 aa10.97□□□□□ -0.65
SCARB2-209ENST00000638409 SSTR3P32745 418 aaPredicted RBP10.97□□□□□ -0.65
SCARB2-209ENST00000638409 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
SCARB2-209ENST00000638409 MYSM1Q5VVJ2 828 aa10.96□□□□□ -0.65
SCARB2-209ENST00000638409 HNRNPMP52272 730 aaKnown RBP eCLIP10.96□□□□□ -0.66
SCARB2-209ENST00000638409 PPP1R1BQ9UD71 204 aaPredicted RBP10.96□□□□□ -0.66
SCARB2-209ENST00000638409 HECW2Q9P2P5 1572 aa10.96□□□□□ -0.66
SCARB2-209ENST00000638409 FCHSD2O94868 740 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 SPATA32Q96LK8 384 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 TMUB1Q9BVT8 246 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 CDCA8Q53HL2 280 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 NLRP7Q8WX94 980 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 CCDC141Q6ZP82 1450 aa10.95□□□□□ -0.66
SCARB2-209ENST00000638409 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.95□□□□□ -0.66
SCARB2-209ENST00000638409 TMEM88BA6NKF7 163 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 HDGFL1Q5TGJ6 251 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 CERS3Q8IU89 383 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 ZFYVE16Q7Z3T8 1539 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 RTEL1-TNFRSF6BF6WH68 1400 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 INO80Q9ULG1 1556 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-209ENST00000638409 PRIM1P49642 420 aaKnown RBP10.94□□□□□ -0.66
SCARB2-209ENST00000638409 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
SCARB2-209ENST00000638409 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 MAST1Q9Y2H9 1570 aa10.94□□□□□ -0.66
SCARB2-209ENST00000638409 KIDINS220Q9ULH0 1771 aa10.93□□□□□ -0.66
SCARB2-209ENST00000638409 KDM4AO75164 1064 aa10.93□□□□□ -0.66
SCARB2-209ENST00000638409 REREQ9P2R6 1566 aa10.92□□□□□ -0.66
SCARB2-209ENST00000638409 RRBP1Q9P2E9 1410 aaKnown RBP10.92□□□□□ -0.66
SCARB2-209ENST00000638409 ZNF16P17020 682 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-209ENST00000638409 DSG2Q14126 1118 aa10.92□□□□□ -0.66
SCARB2-209ENST00000638409 DNMT1P26358 1616 aaKnown RBP10.92□□□□□ -0.66
SCARB2-209ENST00000638409 TCF3P15923 654 aa10.92□□□□□ -0.66
SCARB2-209ENST00000638409 ARID4BQ4LE39 1312 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-209ENST00000638409 CROCC2H7BZ55 1655 aa10.92□□□□□ -0.66
SCARB2-209ENST00000638409 SHANK2Q9UPX8 1470 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 ATP7AQ04656 1500 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
SCARB2-209ENST00000638409 DRC1Q96MC2 740 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
SCARB2-209ENST00000638409 SPAG9O60271 1321 aaKnown RBP10.91□□□□□ -0.66
SCARB2-209ENST00000638409 YEATS2Q9ULM3 1422 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 ATP10AO60312 1499 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 DIP2CQ9Y2E4 1556 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 BANK1Q8NDB2 785 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
SCARB2-209ENST00000638409 SPDYE1Q8NFV5 336 aaPredicted RBP10.9□□□□□ -0.66
SCARB2-209ENST00000638409 ABCC5O15440 1437 aa10.9□□□□□ -0.66
SCARB2-209ENST00000638409 ABCA6Q8N139 1617 aa10.9□□□□□ -0.66
SCARB2-209ENST00000638409 CLK2P49760 499 aaKnown RBP10.9□□□□□ -0.66
SCARB2-209ENST00000638409 DAPK1P53355 1430 aa10.89□□□□□ -0.67
SCARB2-209ENST00000638409 DNAJC14Q6Y2X3 702 aaPredicted RBP10.89□□□□□ -0.67
SCARB2-209ENST00000638409 PTGDRQ13258 359 aa10.89□□□□□ -0.67
SCARB2-209ENST00000638409 DDX12PQ92771 950 aa10.89□□□□□ -0.67
SCARB2-209ENST00000638409 C9orf84Q5VXU9 1444 aa10.89□□□□□ -0.67
SCARB2-209ENST00000638409 TSPY4P0CV99 314 aa10.88□□□□□ -0.67
SCARB2-209ENST00000638409 TSPY10P0CW01 314 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms