RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 USP47Q96K76 1375 aa27.48■■□□□ 1.99
HLA-A-209ENST00000638375 CENPJQ9HC77 1338 aaPredicted RBP27.48■■□□□ 1.99
HLA-A-209ENST00000638375 C14orf37Q86TY3 774 aa27.48■■□□□ 1.99
HLA-A-209ENST00000638375 C19orf44Q9H6X5 657 aa27.45■■□□□ 1.98
HLA-A-209ENST00000638375 MSH6P52701 1360 aa27.45■■□□□ 1.98
HLA-A-209ENST00000638375 MINK1Q8N4C8 1332 aaPredicted RBP27.44■■□□□ 1.98
HLA-A-209ENST00000638375 QRICH2Q9H0J4 1663 aa27.43■■□□□ 1.98
HLA-A-209ENST00000638375 ADGRB2O60241 1585 aa27.42■■□□□ 1.98
HLA-A-209ENST00000638375 ST20-MTHFSA0A0A6YYL1 179 aa27.41■■□□□ 1.98
HLA-A-209ENST00000638375 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
HLA-A-209ENST00000638375 DCCP43146 1447 aa27.41■■□□□ 1.98
HLA-A-209ENST00000638375 CDC42BPGQ6DT37 1551 aa27.4■■□□□ 1.98
HLA-A-209ENST00000638375 SBNO2Q9Y2G9 1366 aa27.37■■□□□ 1.97
HLA-A-209ENST00000638375 EIF4G2P78344 907 aaKnown RBP eCLIP27.37■■□□□ 1.97
HLA-A-209ENST00000638375 HSPA5P11021 654 aaKnown RBP27.36■■□□□ 1.97
HLA-A-209ENST00000638375 ATF3P18847 181 aa27.36■■□□□ 1.97
HLA-A-209ENST00000638375 TESK2Q96S53 571 aa27.36■■□□□ 1.97
HLA-A-209ENST00000638375 CADPS2Q86UW7 1296 aa27.35■■□□□ 1.97
HLA-A-209ENST00000638375 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
HLA-A-209ENST00000638375 WASLO00401 505 aaPredicted RBP27.33■■□□□ 1.97
HLA-A-209ENST00000638375 MST1RQ04912 1400 aa27.33■■□□□ 1.96
HLA-A-209ENST00000638375 FMN2Q9NZ56 1722 aa27.32■■□□□ 1.96
HLA-A-209ENST00000638375 UBAP1LF5GYI3 381 aa27.3■■□□□ 1.96
HLA-A-209ENST00000638375 CDK19Q9BWU1 502 aa27.29■■□□□ 1.96
HLA-A-209ENST00000638375 NUTM2FA1L443 756 aa27.28■■□□□ 1.96
HLA-A-209ENST00000638375 TOM1O60784 492 aa27.28■■□□□ 1.96
HLA-A-209ENST00000638375 C1orf167Q5SNV9 1468 aa27.27■■□□□ 1.96
HLA-A-209ENST00000638375 EVC2Q86UK5 1308 aa27.27■■□□□ 1.96
HLA-A-209ENST00000638375 SLAIN2Q9P270 581 aa27.27■■□□□ 1.96
HLA-A-209ENST00000638375 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
HLA-A-209ENST00000638375 USP32Q8NFA0 1604 aa27.25■■□□□ 1.95
HLA-A-209ENST00000638375 CABP2Q9NPB3 220 aa27.24■■□□□ 1.95
HLA-A-209ENST00000638375 ATP7BP35670 1465 aa27.24■■□□□ 1.95
HLA-A-209ENST00000638375 ANKARQ7Z5J8 1434 aa27.24■■□□□ 1.95
HLA-A-209ENST00000638375 DISP3Q9P2K9 1392 aa27.23■■□□□ 1.95
HLA-A-209ENST00000638375 SRPK2P78362 688 aaKnown RBP27.23■■□□□ 1.95
HLA-A-209ENST00000638375 SLC24A1O60721 1099 aa27.2■■□□□ 1.94
HLA-A-209ENST00000638375 TMF1P82094 1093 aa27.2■■□□□ 1.94
HLA-A-209ENST00000638375 NUDT16Q96DE0 195 aaKnown RBP27.2■■□□□ 1.94
HLA-A-209ENST00000638375 PIP4K2BP78356 416 aa27.19■■□□□ 1.94
HLA-A-209ENST00000638375 ORAI2Q96SN7 254 aa27.19■■□□□ 1.94
HLA-A-209ENST00000638375 RGPD8O14715 1765 aaPredicted RBP27.17■■□□□ 1.94
HLA-A-209ENST00000638375 BRINP3Q76B58 766 aa27.17■■□□□ 1.94
HLA-A-209ENST00000638375 ESCO1Q5FWF5 840 aa27.16■■□□□ 1.94
HLA-A-209ENST00000638375 ROBO1Q9Y6N7 1651 aa27.16■■□□□ 1.94
HLA-A-209ENST00000638375 TOPAZ1Q8N9V7 1692 aa27.15■■□□□ 1.94
HLA-A-209ENST00000638375 SCAF1Q9H7N4 1312 aaKnown RBP27.15■■□□□ 1.94
HLA-A-209ENST00000638375 PUS7Q96PZ0 661 aaKnown RBP27.14■■□□□ 1.94
HLA-A-209ENST00000638375 CCDC61Q9Y6R9 512 aa27.14■■□□□ 1.94
HLA-A-209ENST00000638375 ATAD2Q6PL18 1390 aa27.13■■□□□ 1.93
HLA-A-209ENST00000638375 C11orf95C9JLR9 678 aaPredicted RBP27.13■■□□□ 1.93
HLA-A-209ENST00000638375 ITSN1Q15811 1721 aa27.11■■□□□ 1.93
HLA-A-209ENST00000638375 PHF8Q9UPP1 1060 aa27.11■■□□□ 1.93
HLA-A-209ENST00000638375 PPIP5K1Q6PFW1 1433 aa27.1■■□□□ 1.93
HLA-A-209ENST00000638375 PMFBP1Q8TBY8 1022 aa27.1■■□□□ 1.93
HLA-A-209ENST00000638375 FBXO41Q8TF61 875 aa27.1■■□□□ 1.93
HLA-A-209ENST00000638375 CDCA8Q53HL2 280 aa27.09■■□□□ 1.93
HLA-A-209ENST00000638375 KIF1AQ12756 1690 aa27.08■■□□□ 1.93
HLA-A-209ENST00000638375 CABP1Q9NZU7 370 aa27.08■■□□□ 1.93
HLA-A-209ENST00000638375 PLEKHG3A1L390 1219 aa27.07■■□□□ 1.92
HLA-A-209ENST00000638375 DDX17Q92841 729 aaKnown RBP27.07■■□□□ 1.92
HLA-A-209ENST00000638375 NHSL1Q5SYE7 1610 aa27.05■■□□□ 1.92
HLA-A-209ENST00000638375 FOXO3O43524 673 aa27.04■■□□□ 1.92
HLA-A-209ENST00000638375 KIF7Q2M1P5 1343 aa27.04■■□□□ 1.92
HLA-A-209ENST00000638375 AHDC1Q5TGY3 1603 aaPredicted RBP27.04■■□□□ 1.92
HLA-A-209ENST00000638375 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
HLA-A-209ENST00000638375 SLC12A5Q9H2X9 1139 aa27.03■■□□□ 1.92
HLA-A-209ENST00000638375 ACEP12821 1306 aa27.02■■□□□ 1.92
HLA-A-209ENST00000638375 TMC1Q8TDI8 760 aa27.02■■□□□ 1.92
HLA-A-209ENST00000638375 POLR3GLQ9BT43 218 aa27.02■■□□□ 1.92
HLA-A-209ENST00000638375 NPHP3Q7Z494 1330 aa27.01■■□□□ 1.91
HLA-A-209ENST00000638375 NGDNQ8NEJ9 315 aaKnown RBP27.01■■□□□ 1.91
HLA-A-209ENST00000638375 NINLQ9Y2I6 1382 aa27■■□□□ 1.91
HLA-A-209ENST00000638375 WASHC2AQ641Q2 1341 aa27■■□□□ 1.91
HLA-A-209ENST00000638375 MYOM1P52179 1685 aa27■■□□□ 1.91
HLA-A-209ENST00000638375 CD163L1Q9NR16 1453 aa27■■□□□ 1.91
HLA-A-209ENST00000638375 CCDC7Q96M83 1385 aa26.99■■□□□ 1.91
HLA-A-209ENST00000638375 PXDNQ92626 1479 aa26.99■■□□□ 1.91
HLA-A-209ENST00000638375 XPCQ01831 940 aaPredicted RBP26.98■■□□□ 1.91
HLA-A-209ENST00000638375 CPSF1Q10570 1443 aaKnown RBP26.98■■□□□ 1.91
HLA-A-209ENST00000638375 SOS2Q07890 1332 aaPredicted RBP26.97■■□□□ 1.91
HLA-A-209ENST00000638375 PHLPP1O60346 1717 aa26.96■■□□□ 1.91
HLA-A-209ENST00000638375 HSPA1LP34931 641 aa26.96■■□□□ 1.91
HLA-A-209ENST00000638375 COL16A1Q07092 1604 aaPredicted RBP26.95■■□□□ 1.91
HLA-A-209ENST00000638375 KRT28Q7Z3Y7 464 aa26.95■■□□□ 1.9
HLA-A-209ENST00000638375 PSME1Q06323 249 aa26.94■■□□□ 1.9
HLA-A-209ENST00000638375 A0A1W2PP64 1363 aa26.94■■□□□ 1.9
HLA-A-209ENST00000638375 AKAP12Q02952 1782 aa26.93■■□□□ 1.9
HLA-A-209ENST00000638375 USP6P35125 1406 aa26.92■■□□□ 1.9
HLA-A-209ENST00000638375 ANKRD36BQ8N2N9 1353 aa26.92■■□□□ 1.9
HLA-A-209ENST00000638375 TERF2IPQ9NYB0 399 aa26.91■■□□□ 1.9
HLA-A-209ENST00000638375 TRPM3Q9HCF6 1732 aaPredicted RBP26.9■■□□□ 1.9
HLA-A-209ENST00000638375 HDGFL2Q7Z4V5 671 aaPredicted RBP26.9■■□□□ 1.9
HLA-A-209ENST00000638375 ZNF692Q9BU19 519 aaPredicted RBP26.9■■□□□ 1.9
HLA-A-209ENST00000638375 SSH2Q76I76 1423 aa26.9■■□□□ 1.9
HLA-A-209ENST00000638375 SBNO1A3KN83 1393 aa26.89■■□□□ 1.9
HLA-A-209ENST00000638375 KTN1Q86UP2 1357 aaKnown RBP26.89■■□□□ 1.9
HLA-A-209ENST00000638375 MON2Q7Z3U7 1717 aa26.89■■□□□ 1.9
HLA-A-209ENST00000638375 NRKQ7Z2Y5 1582 aa26.86■■□□□ 1.89
HLA-A-209ENST00000638375 SPATA31A3Q5VYP0 1347 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms