RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 AMOTL2Q9Y2J4 779 aa16.22■□□□□ 0.19
CLN6-223ENST00000637823 MYOM1P52179 1685 aa16.21■□□□□ 0.18
CLN6-223ENST00000637823 MINK1Q8N4C8 1332 aaPredicted RBP16.2■□□□□ 0.18
CLN6-223ENST00000637823 TULP4Q9NRJ4 1543 aa16.2■□□□□ 0.18
CLN6-223ENST00000637823 XRN1Q8IZH2 1706 aaKnown RBP16.2■□□□□ 0.18
CLN6-223ENST00000637823 PHF23Q9BUL5 403 aaPredicted RBP16.19■□□□□ 0.18
CLN6-223ENST00000637823 ROBO2Q9HCK4 1378 aa16.18■□□□□ 0.18
CLN6-223ENST00000637823 PLEKHH1Q9ULM0 1364 aa16.18■□□□□ 0.18
CLN6-223ENST00000637823 PANK3Q9H999 370 aa16.18■□□□□ 0.18
CLN6-223ENST00000637823 LMTK3Q96Q04 1460 aa16.17■□□□□ 0.18
CLN6-223ENST00000637823 PTCH1Q13635 1447 aa16.17■□□□□ 0.18
CLN6-223ENST00000637823 CDK19Q9BWU1 502 aa16.16■□□□□ 0.18
CLN6-223ENST00000637823 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
CLN6-223ENST00000637823 PER1O15534 1290 aaPredicted RBP16.15■□□□□ 0.18
CLN6-223ENST00000637823 SRPK2P78362 688 aaKnown RBP16.15■□□□□ 0.18
CLN6-223ENST00000637823 STRCQ7RTU9 1775 aa16.14■□□□□ 0.17
CLN6-223ENST00000637823 HSPA2P54652 639 aa16.14■□□□□ 0.17
CLN6-223ENST00000637823 CABP2Q9NPB3 220 aa16.14■□□□□ 0.17
CLN6-223ENST00000637823 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
CLN6-223ENST00000637823 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
CLN6-223ENST00000637823 KCNA6P17658 529 aa16.13■□□□□ 0.17
CLN6-223ENST00000637823 ADGRB2O60241 1585 aa16.13■□□□□ 0.17
CLN6-223ENST00000637823 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
CLN6-223ENST00000637823 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
CLN6-223ENST00000637823 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
CLN6-223ENST00000637823 CCER2I3L3R5 266 aa16.11■□□□□ 0.17
CLN6-223ENST00000637823 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
CLN6-223ENST00000637823 KNSTRNQ9Y448 316 aa16.11■□□□□ 0.17
CLN6-223ENST00000637823 NWD1Q149M9 1564 aa16.1■□□□□ 0.17
CLN6-223ENST00000637823 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
CLN6-223ENST00000637823 RALBP1Q15311 655 aa16.07■□□□□ 0.16
CLN6-223ENST00000637823 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
CLN6-223ENST00000637823 ANKRD36BQ8N2N9 1353 aa16.06■□□□□ 0.16
CLN6-223ENST00000637823 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
CLN6-223ENST00000637823 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
CLN6-223ENST00000637823 TERF2IPQ9NYB0 399 aa16.06■□□□□ 0.16
CLN6-223ENST00000637823 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
CLN6-223ENST00000637823 CABP1Q9NZU7 370 aa16.04■□□□□ 0.16
CLN6-223ENST00000637823 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
CLN6-223ENST00000637823 STRCP1A6NGW2 1772 aa16.03■□□□□ 0.16
CLN6-223ENST00000637823 NALCNQ8IZF0 1738 aa16.03■□□□□ 0.16
CLN6-223ENST00000637823 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
CLN6-223ENST00000637823 HDGFL2Q7Z4V5 671 aaPredicted RBP16.03■□□□□ 0.16
CLN6-223ENST00000637823 PROSER2Q86WR7 435 aaPredicted RBP16.03■□□□□ 0.16
CLN6-223ENST00000637823 USP32Q8NFA0 1604 aa16.03■□□□□ 0.16
CLN6-223ENST00000637823 RGPD8O14715 1765 aaPredicted RBP16.03■□□□□ 0.16
CLN6-223ENST00000637823 ITSN1Q15811 1721 aa16.02■□□□□ 0.16
CLN6-223ENST00000637823 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
CLN6-223ENST00000637823 PARD3Q8TEW0 1356 aa16.02■□□□□ 0.16
CLN6-223ENST00000637823 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.16
CLN6-223ENST00000637823 ATP7BP35670 1465 aa16.02■□□□□ 0.15
CLN6-223ENST00000637823 PPIP5K1Q6PFW1 1433 aa16.02■□□□□ 0.15
CLN6-223ENST00000637823 TOPAZ1Q8N9V7 1692 aa16.02■□□□□ 0.15
CLN6-223ENST00000637823 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
CLN6-223ENST00000637823 CNGB1Q14028 1251 aaPredicted RBP16.01■□□□□ 0.15
CLN6-223ENST00000637823 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
CLN6-223ENST00000637823 CD163L1Q9NR16 1453 aa16.01■□□□□ 0.15
CLN6-223ENST00000637823 NSD3Q9BZ95 1437 aa16.01■□□□□ 0.15
CLN6-223ENST00000637823 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
CLN6-223ENST00000637823 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
CLN6-223ENST00000637823 ADGRL3Q9HAR2 1447 aa16■□□□□ 0.15
CLN6-223ENST00000637823 A0A1W2PP64 1363 aa16■□□□□ 0.15
CLN6-223ENST00000637823 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
CLN6-223ENST00000637823 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
CLN6-223ENST00000637823 PLEKHG3A1L390 1219 aa15.99■□□□□ 0.15
CLN6-223ENST00000637823 ZNF692Q9BU19 519 aaPredicted RBP15.99■□□□□ 0.15
CLN6-223ENST00000637823 ANKARQ7Z5J8 1434 aa15.99■□□□□ 0.15
CLN6-223ENST00000637823 NCOA3Q9Y6Q9 1424 aa15.99■□□□□ 0.15
CLN6-223ENST00000637823 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
CLN6-223ENST00000637823 C14orf37Q86TY3 774 aa15.97■□□□□ 0.15
CLN6-223ENST00000637823 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
CLN6-223ENST00000637823 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
CLN6-223ENST00000637823 NSD2O96028 1365 aa15.96■□□□□ 0.15
CLN6-223ENST00000637823 KIF20BQ96Q89 1820 aa15.96■□□□□ 0.14
CLN6-223ENST00000637823 ANKRD26Q9UPS8 1709 aa15.95■□□□□ 0.14
CLN6-223ENST00000637823 NUTM2FA1L443 756 aa15.95■□□□□ 0.14
CLN6-223ENST00000637823 C19orf44Q9H6X5 657 aa15.95■□□□□ 0.14
CLN6-223ENST00000637823 NLRP13Q86W25 1043 aa15.94■□□□□ 0.14
CLN6-223ENST00000637823 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
CLN6-223ENST00000637823 BRD4O60885 1362 aaPredicted RBP15.94■□□□□ 0.14
CLN6-223ENST00000637823 XIRP1Q702N8 1843 aaKnown RBP15.94■□□□□ 0.14
CLN6-223ENST00000637823 EDC4Q6P2E9 1401 aaKnown RBP15.94■□□□□ 0.14
CLN6-223ENST00000637823 ACEP12821 1306 aa15.94■□□□□ 0.14
CLN6-223ENST00000637823 TMEM94Q12767 1356 aa15.93■□□□□ 0.14
CLN6-223ENST00000637823 CCDC184Q52MB2 194 aa15.93■□□□□ 0.14
CLN6-223ENST00000637823 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
CLN6-223ENST00000637823 POLR3AO14802 1390 aaPredicted RBP15.91■□□□□ 0.14
CLN6-223ENST00000637823 FYB1O15117 783 aa15.91■□□□□ 0.14
CLN6-223ENST00000637823 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
CLN6-223ENST00000637823 NGDNQ8NEJ9 315 aaKnown RBP15.9■□□□□ 0.14
CLN6-223ENST00000637823 DCCP43146 1447 aa15.9■□□□□ 0.14
CLN6-223ENST00000637823 ZNF335Q9H4Z2 1342 aaPredicted RBP15.9■□□□□ 0.14
CLN6-223ENST00000637823 ATF3P18847 181 aa15.89■□□□□ 0.13
CLN6-223ENST00000637823 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
CLN6-223ENST00000637823 LRRC7Q96NW7 1537 aa15.89■□□□□ 0.13
CLN6-223ENST00000637823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLN6-223ENST00000637823 PHF8Q9UPP1 1060 aa15.88■□□□□ 0.13
CLN6-223ENST00000637823 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
CLN6-223ENST00000637823 USP6P35125 1406 aa15.87■□□□□ 0.13
CLN6-223ENST00000637823 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms