RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-231	ENST00000637786	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.66	■■■□□ 2.66
CHRNA7-231	ENST00000637786	MSH6	P52701	1360 aa		31.66	■■■□□ 2.66
CHRNA7-231	ENST00000637786	DCC	P43146	1447 aa		31.66	■■■□□ 2.66
CHRNA7-231	ENST00000637786	C14orf37	Q86TY3	774 aa		31.65	■■■□□ 2.66
CHRNA7-231	ENST00000637786	QRICH2	Q9H0J4	1663 aa		31.64	■■■□□ 2.66
CHRNA7-231	ENST00000637786	USP47	Q96K76	1375 aa		31.64	■■■□□ 2.66
CHRNA7-231	ENST00000637786	ADGRB2	O60241	1585 aa		31.64	■■■□□ 2.65
CHRNA7-231	ENST00000637786	CDC42BPG	Q6DT37	1551 aa		31.62	■■■□□ 2.65
CHRNA7-231	ENST00000637786	SBNO2	Q9Y2G9	1366 aa		31.6	■■■□□ 2.65
CHRNA7-231	ENST00000637786	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.6	■■■□□ 2.65
CHRNA7-231	ENST00000637786	CADPS2	Q86UW7	1296 aa		31.56	■■■□□ 2.64
CHRNA7-231	ENST00000637786	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.54	■■■□□ 2.64
CHRNA7-231	ENST00000637786	ATF3	P18847	181 aa		31.54	■■■□□ 2.64
CHRNA7-231	ENST00000637786	ST20-MTHFS	A0A0A6YYL1	179 aa		31.53	■■■□□ 2.64
CHRNA7-231	ENST00000637786	EIF4G2	P78344	907 aa	Known RBP eCLIP	31.53	■■■□□ 2.64
CHRNA7-231	ENST00000637786	FMN2	Q9NZ56	1722 aa		31.52	■■■□□ 2.64
CHRNA7-231	ENST00000637786	SLC24A1	O60721	1099 aa		31.51	■■■□□ 2.63
CHRNA7-231	ENST00000637786	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.49	■■■□□ 2.63
CHRNA7-231	ENST00000637786	WASL	O00401	505 aa	Predicted RBP	31.48	■■■□□ 2.63
CHRNA7-231	ENST00000637786	TOM1	O60784	492 aa		31.48	■■■□□ 2.63
CHRNA7-231	ENST00000637786	TESK2	Q96S53	571 aa		31.48	■■■□□ 2.63
CHRNA7-231	ENST00000637786	MST1R	Q04912	1400 aa		31.46	■■■□□ 2.63
CHRNA7-231	ENST00000637786	TULP4	Q9NRJ4	1543 aa		31.45	■■■□□ 2.63
CHRNA7-231	ENST00000637786	HSPA5	P11021	654 aa	Known RBP	31.45	■■■□□ 2.63
CHRNA7-231	ENST00000637786	EVC2	Q86UK5	1308 aa		31.45	■■■□□ 2.62
CHRNA7-231	ENST00000637786	SLAIN2	Q9P270	581 aa		31.43	■■■□□ 2.62
CHRNA7-231	ENST00000637786	ANKAR	Q7Z5J8	1434 aa		31.42	■■■□□ 2.62
CHRNA7-231	ENST00000637786	UBAP1L	F5GYI3	381 aa		31.42	■■■□□ 2.62
CHRNA7-231	ENST00000637786	CDK19	Q9BWU1	502 aa		31.41	■■■□□ 2.62
CHRNA7-231	ENST00000637786	C1orf167	Q5SNV9	1468 aa		31.4	■■■□□ 2.62
CHRNA7-231	ENST00000637786	USP32	Q8NFA0	1604 aa		31.38	■■■□□ 2.61
CHRNA7-231	ENST00000637786	ATP7B	P35670	1465 aa		31.36	■■■□□ 2.61
CHRNA7-231	ENST00000637786	TMF1	P82094	1093 aa		31.36	■■■□□ 2.61
CHRNA7-231	ENST00000637786	PUS7	Q96PZ0	661 aa	Known RBP	31.36	■■■□□ 2.61
CHRNA7-231	ENST00000637786	RGPD8	O14715	1765 aa	Predicted RBP	31.35	■■■□□ 2.61
CHRNA7-231	ENST00000637786	ITSN1	Q15811	1721 aa		31.35	■■■□□ 2.61
CHRNA7-231	ENST00000637786	SRPK2	P78362	688 aa	Known RBP	31.34	■■■□□ 2.61
CHRNA7-231	ENST00000637786	PRR36	Q9H6K5	1346 aa		31.32	■■■□□ 2.6
CHRNA7-231	ENST00000637786	TOPAZ1	Q8N9V7	1692 aa		31.32	■■■□□ 2.6
CHRNA7-231	ENST00000637786	NUTM2F	A1L443	756 aa		31.31	■■■□□ 2.6
CHRNA7-231	ENST00000637786	NUDT16	Q96DE0	195 aa	Known RBP	31.31	■■■□□ 2.6
CHRNA7-231	ENST00000637786	CABP2	Q9NPB3	220 aa		31.31	■■■□□ 2.6
CHRNA7-231	ENST00000637786	ROBO1	Q9Y6N7	1651 aa		31.31	■■■□□ 2.6
CHRNA7-231	ENST00000637786	ATAD2	Q6PL18	1390 aa		31.3	■■■□□ 2.6
CHRNA7-231	ENST00000637786	DISP3	Q9P2K9	1392 aa		31.3	■■■□□ 2.6
CHRNA7-231	ENST00000637786	CDCA8	Q53HL2	280 aa		31.3	■■■□□ 2.6
CHRNA7-231	ENST00000637786	KIF1A	Q12756	1690 aa		31.29	■■■□□ 2.6
CHRNA7-231	ENST00000637786	CCDC61	Q9Y6R9	512 aa		31.29	■■■□□ 2.6
CHRNA7-231	ENST00000637786	BRINP3	Q76B58	766 aa		31.27	■■■□□ 2.6
CHRNA7-231	ENST00000637786	PIP4K2B	P78356	416 aa		31.26	■■■□□ 2.59
CHRNA7-231	ENST00000637786	ESCO1	Q5FWF5	840 aa		31.26	■■■□□ 2.59
CHRNA7-231	ENST00000637786	ORAI2	Q96SN7	254 aa		31.26	■■■□□ 2.59
CHRNA7-231	ENST00000637786	FBXO41	Q8TF61	875 aa		31.25	■■■□□ 2.59
CHRNA7-231	ENST00000637786	PHF8	Q9UPP1	1060 aa		31.22	■■■□□ 2.59
CHRNA7-231	ENST00000637786	SCAF1	Q9H7N4	1312 aa	Known RBP	31.22	■■■□□ 2.59
CHRNA7-231	ENST00000637786	PLEKHG3	A1L390	1219 aa		31.21	■■■□□ 2.59
CHRNA7-231	ENST00000637786	PPIP5K1	Q6PFW1	1433 aa		31.21	■■■□□ 2.59
CHRNA7-231	ENST00000637786	NHSL1	Q5SYE7	1610 aa		31.2	■■■□□ 2.59
CHRNA7-231	ENST00000637786	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.2	■■■□□ 2.58
CHRNA7-231	ENST00000637786	NINL	Q9Y2I6	1382 aa		31.19	■■■□□ 2.58
CHRNA7-231	ENST00000637786	POLR3A	O14802	1390 aa	Predicted RBP	31.16	■■■□□ 2.58
CHRNA7-231	ENST00000637786	CABP1	Q9NZU7	370 aa		31.15	■■■□□ 2.58
CHRNA7-231	ENST00000637786	NPHP3	Q7Z494	1330 aa		31.15	■■■□□ 2.58
CHRNA7-231	ENST00000637786	PMFBP1	Q8TBY8	1022 aa		31.14	■■■□□ 2.58
CHRNA7-231	ENST00000637786	C11orf95	C9JLR9	678 aa	Predicted RBP	31.13	■■■□□ 2.57
CHRNA7-231	ENST00000637786	FOXO3	O43524	673 aa		31.11	■■■□□ 2.57
CHRNA7-231	ENST00000637786	PHLPP1	O60346	1717 aa		31.11	■■■□□ 2.57
CHRNA7-231	ENST00000637786	MYOM1	P52179	1685 aa		31.11	■■■□□ 2.57
CHRNA7-231	ENST00000637786	NGDN	Q8NEJ9	315 aa	Known RBP	31.11	■■■□□ 2.57
CHRNA7-231	ENST00000637786	ACE	P12821	1306 aa		31.1	■■■□□ 2.57
CHRNA7-231	ENST00000637786	KIF7	Q2M1P5	1343 aa		31.1	■■■□□ 2.57
CHRNA7-231	ENST00000637786	AKAP12	Q02952	1782 aa		31.1	■■■□□ 2.57
CHRNA7-231	ENST00000637786	PXDN	Q92626	1479 aa		31.08	■■■□□ 2.57
CHRNA7-231	ENST00000637786	SOS2	Q07890	1332 aa	Predicted RBP	31.08	■■■□□ 2.57
CHRNA7-231	ENST00000637786	TMC1	Q8TDI8	760 aa		31.08	■■■□□ 2.57
CHRNA7-231	ENST00000637786	SLC12A5	Q9H2X9	1139 aa		31.08	■■■□□ 2.57
CHRNA7-231	ENST00000637786	CPSF1	Q10570	1443 aa	Known RBP	31.07	■■■□□ 2.57
CHRNA7-231	ENST00000637786	CCDC7	Q96M83	1385 aa		31.06	■■■□□ 2.56
CHRNA7-231	ENST00000637786	COL16A1	Q07092	1604 aa	Predicted RBP	31.06	■■■□□ 2.56
CHRNA7-231	ENST00000637786	CD163L1	Q9NR16	1453 aa		31.06	■■■□□ 2.56
CHRNA7-231	ENST00000637786	PSME1	Q06323	249 aa		31.05	■■■□□ 2.56
CHRNA7-231	ENST00000637786	DDX17	Q92841	729 aa	Known RBP	31.05	■■■□□ 2.56
CHRNA7-231	ENST00000637786	ZNF692	Q9BU19	519 aa	Predicted RBP	31.05	■■■□□ 2.56
CHRNA7-231	ENST00000637786	BRD4	O60885	1362 aa	Predicted RBP	31.05	■■■□□ 2.56
CHRNA7-231	ENST00000637786	TERF2IP	Q9NYB0	399 aa		31.04	■■■□□ 2.56
CHRNA7-231	ENST00000637786	WASHC2A	Q641Q2	1341 aa		31.03	■■■□□ 2.56
CHRNA7-231	ENST00000637786	KRT28	Q7Z3Y7	464 aa		31.03	■■■□□ 2.56
CHRNA7-231	ENST00000637786	MON2	Q7Z3U7	1717 aa		31.03	■■■□□ 2.56
CHRNA7-231	ENST00000637786	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.02	■■■□□ 2.56
CHRNA7-231	ENST00000637786	USP6	P35125	1406 aa		31.02	■■■□□ 2.56
CHRNA7-231	ENST00000637786	POLR3GL	Q9BT43	218 aa		31.02	■■■□□ 2.56
CHRNA7-231	ENST00000637786	ANKRD36B	Q8N2N9	1353 aa		31.02	■■■□□ 2.56
CHRNA7-231	ENST00000637786	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	31.01	■■■□□ 2.55
CHRNA7-231	ENST00000637786	SBNO1	A3KN83	1393 aa		31.01	■■■□□ 2.55
CHRNA7-231	ENST00000637786	HSPA1L	P34931	641 aa		31	■■■□□ 2.55
CHRNA7-231	ENST00000637786		A0A1W2PP64	1363 aa		31	■■■□□ 2.55
CHRNA7-231	ENST00000637786	KTN1	Q86UP2	1357 aa	Known RBP	30.98	■■■□□ 2.55
CHRNA7-231	ENST00000637786	XPC	Q01831	940 aa	Predicted RBP	30.98	■■■□□ 2.55
CHRNA7-231	ENST00000637786	LRRC59	Q96AG4	307 aa	Known RBP	30.98	■■■□□ 2.55
CHRNA7-231	ENST00000637786	SSH2	Q76I76	1423 aa		30.97	■■■□□ 2.55

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