RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 GPRASP1Q5JY77 1395 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 PSME1Q06323 249 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 NBPF8Q3BBV2 869 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 TMEM132EQ6IEE7 984 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 IPO8O15397 1037 aaKnown RBP7.11□□□□□ -1.27
CHD2-227ENST00000637572 CLASP1Q7Z460 1538 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.11□□□□□ -1.271e-6■□□□□ 11.1
CHD2-227ENST00000637572 PRAM1Q96QH2 718 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 SOX12O15370 315 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 MYO5CQ9NQX4 1742 aa7.11□□□□□ -1.27
CHD2-227ENST00000637572 PROSER2Q86WR7 435 aaPredicted RBP7.1□□□□□ -1.27
CHD2-227ENST00000637572 NBPF1Q3BBV0 1214 aa7.1□□□□□ -1.27
CHD2-227ENST00000637572 LAS1LQ9Y4W2 734 aaKnown RBP7.1□□□□□ -1.27
CHD2-227ENST00000637572 PPP1R1BQ9UD71 204 aaPredicted RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 BRD4O60885 1362 aaPredicted RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 ANP32AP39687 249 aaKnown RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 GOLGA2Q08379 1002 aa7.09□□□□□ -1.27
CHD2-227ENST00000637572 C14orf93Q9H972 538 aaKnown RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 HDAC5Q9UQL6 1122 aa7.09□□□□□ -1.27
CHD2-227ENST00000637572 NINLQ9Y2I6 1382 aa7.09□□□□□ -1.27
CHD2-227ENST00000637572 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 ZFP91Q96JP5 570 aaPredicted RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 SCAF11Q99590 1463 aaKnown RBP7.09□□□□□ -1.27
CHD2-227ENST00000637572 MLH3Q9UHC1 1453 aa7.09□□□□□ -1.27
CHD2-227ENST00000637572 MAGI3Q5TCQ9 1506 aa7.09□□□□□ -1.27
CHD2-227ENST00000637572 ZCCHC11Q5TAX3 1644 aaKnown RBP7.08□□□□□ -1.28
CHD2-227ENST00000637572 MBD5Q9P267 1494 aa7.08□□□□□ -1.28
CHD2-227ENST00000637572 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
CHD2-227ENST00000637572 HSPA1LP34931 641 aa7.08□□□□□ -1.28
CHD2-227ENST00000637572 ARHGEF12Q9NZN5 1544 aa7.08□□□□□ -1.28
CHD2-227ENST00000637572 IL27Q8NEV9 243 aa7.08□□□□□ -1.28
CHD2-227ENST00000637572 NUTM2FA1L443 756 aa7.08□□□□□ -1.28
CHD2-227ENST00000637572 ZFYVE16Q7Z3T8 1539 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 FAM212AQ96EL1 285 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 PUS7Q96PZ0 661 aaKnown RBP7.07□□□□□ -1.28
CHD2-227ENST00000637572 CABP2Q9NPB3 220 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 TSPOAP1O95153 1857 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 FBXO31Q5XUX0 539 aaPredicted RBP7.07□□□□□ -1.28
CHD2-227ENST00000637572 CDK19Q9BWU1 502 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 CCDC61Q9Y6R9 512 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 PPP4R2Q9NY27 417 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 ZRANB1Q9UGI0 708 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 PREX2Q70Z35 1606 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 GSE1Q14687 1217 aa7.07□□□□□ -1.28
CHD2-227ENST00000637572 NOS1P29475 1434 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 SUPT16HQ9Y5B9 1047 aaKnown RBP7.06□□□□□ -1.28
CHD2-227ENST00000637572 ABCC1P33527 1531 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 NCKAP5LQ9HCH0 1330 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 ADCY10Q96PN6 1610 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 EIF2AK4Q9P2K8 1649 aaKnown RBP7.06□□□□□ -1.28
CHD2-227ENST00000637572 ADGBQ8N7X0 1667 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 MAST1Q9Y2H9 1570 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 ZMYM3Q14202 1370 aa7.06□□□□□ -1.28
CHD2-227ENST00000637572 SPDYE2BA6NHP3 402 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 E9PSI1 815 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 SPDYE6P0CI01 402 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 SPDYE2Q495Y8 402 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 SLC26A8Q96RN1 970 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 GPBP1L1Q9HC44 474 aaPredicted RBP7.05□□□□□ -1.28
CHD2-227ENST00000637572 ZBED9Q6R2W3 1325 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 RALGAPBQ86X10 1494 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 KRI1Q8N9T8 703 aaKnown RBP7.05□□□□□ -1.28
CHD2-227ENST00000637572 STK31Q9BXU1 1019 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 RTL5Q5HYW3 569 aaPredicted RBP7.05□□□□□ -1.28
CHD2-227ENST00000637572 ADGRF5Q8IZF2 1346 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 RCAN3Q9UKA8 241 aa7.05□□□□□ -1.28
CHD2-227ENST00000637572 PZPP20742 1482 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 FRAT1Q92837 279 aaPredicted RBP7.04□□□□□ -1.28
CHD2-227ENST00000637572 RUNDC1Q96C34 613 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 SHROOM2Q13796 1616 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 SEMA3EO15041 775 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 NLRP6P59044 892 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 C1orf141Q5JVX7 400 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 NSD2O96028 1365 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 GCC2Q8IWJ2 1684 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 ESCO1Q5FWF5 840 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 RIMS2Q9UQ26 1411 aa7.04□□□□□ -1.28
CHD2-227ENST00000637572 EVA1CP58658 441 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 PRAG1Q86YV5 1406 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 SAMD9LQ8IVG5 1584 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 CASC1Q6TDU7 716 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 NGLY1Q96IV0 654 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 BCL11AQ9H165 835 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 CABP1Q9NZU7 370 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.03□□□□□ -1.28
CHD2-227ENST00000637572 NUDT16Q96DE0 195 aaKnown RBP7.03□□□□□ -1.28
CHD2-227ENST00000637572 AMOTL2Q9Y2J4 779 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 ERCC6L2Q5T890 1561 aa7.03□□□□□ -1.28
CHD2-227ENST00000637572 LRPPRCP42704 1394 aaKnown RBP7.02□□□□□ -1.28
CHD2-227ENST00000637572 UHRF1BP1Q6BDS2 1440 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 SMG6Q86US8 1419 aaKnown RBP7.02□□□□□ -1.29
CHD2-227ENST00000637572 ABTB2Q8N961 1025 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 RBM33Q96EV2 1170 aaKnown RBP7.02□□□□□ -1.29
CHD2-227ENST00000637572 KDM5DQ9BY66 1539 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 WASLO00401 505 aaPredicted RBP7.02□□□□□ -1.29
CHD2-227ENST00000637572 KCNH5Q8NCM2 988 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 SLC12A5Q9H2X9 1139 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 GGNBP2Q9H3C7 697 aa7.02□□□□□ -1.29
CHD2-227ENST00000637572 ZNF335Q9H4Z2 1342 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms