RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RIMS1Q86UR5 1692 aaKnown RBP29.26■■■□□ 2.27
CHRNA7-228ENST00000637519 ZBED9Q6R2W3 1325 aa29.25■■■□□ 2.27
CHRNA7-228ENST00000637519 PPP2R1AP30153 589 aa29.25■■■□□ 2.27
CHRNA7-228ENST00000637519 HDGFP51858 240 aaKnown RBP29.25■■■□□ 2.27
CHRNA7-228ENST00000637519 NPC1L1Q9UHC9 1359 aa29.23■■■□□ 2.27
CHRNA7-228ENST00000637519 DLC1Q96QB1 1528 aa29.23■■■□□ 2.27
CHRNA7-228ENST00000637519 TXNDC2Q86VQ3 553 aa29.22■■■□□ 2.27
CHRNA7-228ENST00000637519 ADAMTS13Q76LX8 1427 aa29.22■■■□□ 2.27
CHRNA7-228ENST00000637519 ABCC11Q96J66 1382 aa29.21■■■□□ 2.27
CHRNA7-228ENST00000637519 PUS7Q96PZ0 661 aaKnown RBP29.19■■■□□ 2.26
CHRNA7-228ENST00000637519 PLEKHG1Q9ULL1 1385 aa29.18■■■□□ 2.26
CHRNA7-228ENST00000637519 CDK19Q9BWU1 502 aa29.17■■■□□ 2.26
CHRNA7-228ENST00000637519 ANKRD36BQ8N2N9 1353 aa29.16■■■□□ 2.26
CHRNA7-228ENST00000637519 SLC26A8Q96RN1 970 aa29.16■■■□□ 2.26
CHRNA7-228ENST00000637519 ARHGAP23Q9P227 1491 aa29.15■■■□□ 2.26
CHRNA7-228ENST00000637519 SLIT1O75093 1534 aa29.15■■■□□ 2.26
CHRNA7-228ENST00000637519 A0A1W2PP64 1363 aa29.14■■■□□ 2.26
CHRNA7-228ENST00000637519 EID1Q9Y6B2 187 aa29.13■■■□□ 2.25
CHRNA7-228ENST00000637519 ATAD2Q6PL18 1390 aa29.13■■■□□ 2.25
CHRNA7-228ENST00000637519 KNDC1Q76NI1 1749 aa29.12■■■□□ 2.25
CHRNA7-228ENST00000637519 ADAMTSL3P82987 1691 aa29.12■■■□□ 2.25
CHRNA7-228ENST00000637519 CEP170BQ9Y4F5 1589 aaPredicted RBP29.1■■■□□ 2.25
CHRNA7-228ENST00000637519 TNNT2P45379 298 aaPredicted RBP29.1■■■□□ 2.25
CHRNA7-228ENST00000637519 TECPR2O15040 1411 aa29.1■■■□□ 2.25
CHRNA7-228ENST00000637519 ROBO2Q9HCK4 1378 aa29.1■■■□□ 2.25
CHRNA7-228ENST00000637519 CPS1P31327 1500 aa29.1■■■□□ 2.25
CHRNA7-228ENST00000637519 THEMISQ8N1K5 641 aaPredicted RBP29.09■■■□□ 2.25
CHRNA7-228ENST00000637519 SUPT16HQ9Y5B9 1047 aaKnown RBP29.09■■■□□ 2.25
CHRNA7-228ENST00000637519 CD163L1Q9NR16 1453 aa29.09■■■□□ 2.25
CHRNA7-228ENST00000637519 USP32Q8NFA0 1604 aa29.08■■■□□ 2.25
CHRNA7-228ENST00000637519 SALL2Q9Y467 1007 aaPredicted RBP29.08■■■□□ 2.25
CHRNA7-228ENST00000637519 MED14O60244 1454 aa29.07■■■□□ 2.24
CHRNA7-228ENST00000637519 CGNL1Q0VF96 1302 aa29.07■■■□□ 2.24
CHRNA7-228ENST00000637519 NINLQ9Y2I6 1382 aa29.06■■■□□ 2.24
CHRNA7-228ENST00000637519 PTPRUQ92729 1446 aa29.06■■■□□ 2.24
CHRNA7-228ENST00000637519 MORC1Q86VD1 984 aa29.06■■■□□ 2.24
CHRNA7-228ENST00000637519 CABP1Q9NZU7 370 aa29.06■■■□□ 2.24
CHRNA7-228ENST00000637519 FAM135BQ49AJ0 1406 aa29.05■■■□□ 2.24
CHRNA7-228ENST00000637519 ADAMTS8Q9UP79 889 aa29.04■■■□□ 2.24
CHRNA7-228ENST00000637519 BLMP54132 1417 aaPredicted RBP29.03■■■□□ 2.24
CHRNA7-228ENST00000637519 FKBP8Q14318 412 aa29.03■■■□□ 2.24
CHRNA7-228ENST00000637519 WASLO00401 505 aaPredicted RBP29.01■■■□□ 2.24
CHRNA7-228ENST00000637519 WDR43Q15061 677 aaKnown RBP eCLIP29■■■□□ 2.23
CHRNA7-228ENST00000637519 NCKAP5LQ9HCH0 1330 aa29■■■□□ 2.23
CHRNA7-228ENST00000637519 TERF2IPQ9NYB0 399 aa28.99■■■□□ 2.23
CHRNA7-228ENST00000637519 SIRT1Q96EB6 747 aa28.98■■■□□ 2.23
CHRNA7-228ENST00000637519 GGNBP2Q9H3C7 697 aa28.97■■■□□ 2.23
CHRNA7-228ENST00000637519 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.96■■■□□ 2.23
CHRNA7-228ENST00000637519 AMOTL2Q9Y2J4 779 aa28.95■■■□□ 2.23
CHRNA7-228ENST00000637519 HDGFL2Q7Z4V5 671 aaPredicted RBP28.95■■■□□ 2.22
CHRNA7-228ENST00000637519 TBX22Q9Y458 520 aa28.95■■■□□ 2.22
CHRNA7-228ENST00000637519 PPIP5K1Q6PFW1 1433 aa28.93■■■□□ 2.22
CHRNA7-228ENST00000637519 NSD2O96028 1365 aa28.93■■■□□ 2.22
CHRNA7-228ENST00000637519 NEFLP07196 543 aa28.93■■■□□ 2.22
CHRNA7-228ENST00000637519 ZNF142P52746 1687 aaPredicted RBP28.93■■■□□ 2.22
CHRNA7-228ENST00000637519 SMG6Q86US8 1419 aaKnown RBP28.92■■■□□ 2.22
CHRNA7-228ENST00000637519 IRX6P78412 446 aaPredicted RBP28.92■■■□□ 2.22
CHRNA7-228ENST00000637519 NUDT16Q96DE0 195 aaKnown RBP28.92■■■□□ 2.22
CHRNA7-228ENST00000637519 INSRP06213 1382 aa28.92■■■□□ 2.22
CHRNA7-228ENST00000637519 PRR36Q9H6K5 1346 aa28.91■■■□□ 2.22
CHRNA7-228ENST00000637519 ATP7BP35670 1465 aa28.9■■■□□ 2.22
CHRNA7-228ENST00000637519 FYB1O15117 783 aa28.9■■■□□ 2.22
CHRNA7-228ENST00000637519 NUDCQ9Y266 331 aa28.9■■■□□ 2.22
CHRNA7-228ENST00000637519 DIP2AQ14689 1571 aa28.9■■■□□ 2.22
CHRNA7-228ENST00000637519 NUTM2FA1L443 756 aa28.9■■■□□ 2.22
CHRNA7-228ENST00000637519 MTHFSP49914 203 aa28.89■■■□□ 2.22
CHRNA7-228ENST00000637519 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.89■■■□□ 2.22
CHRNA7-228ENST00000637519 CCDC146Q8IYE0 955 aa28.89■■■□□ 2.22
CHRNA7-228ENST00000637519 POLR3AO14802 1390 aaPredicted RBP28.89■■■□□ 2.21
CHRNA7-228ENST00000637519 ADGRB2O60241 1585 aa28.87■■■□□ 2.21
CHRNA7-228ENST00000637519 SHPRHQ149N8 1683 aa28.85■■■□□ 2.21
CHRNA7-228ENST00000637519 PTCH1Q13635 1447 aa28.84■■■□□ 2.21
CHRNA7-228ENST00000637519 ANKLE2Q86XL3 938 aa28.84■■■□□ 2.21
CHRNA7-228ENST00000637519 CCDC61Q9Y6R9 512 aa28.84■■■□□ 2.21
CHRNA7-228ENST00000637519 CPSF1Q10570 1443 aaKnown RBP28.84■■■□□ 2.21
CHRNA7-228ENST00000637519 XRN1Q8IZH2 1706 aaKnown RBP28.83■■■□□ 2.21
CHRNA7-228ENST00000637519 CDCA7LQ96GN5 454 aa28.83■■■□□ 2.21
CHRNA7-228ENST00000637519 KIF20BQ96Q89 1820 aa28.83■■■□□ 2.21
CHRNA7-228ENST00000637519 ANKRD26Q9UPS8 1709 aa28.83■■■□□ 2.21
CHRNA7-228ENST00000637519 CDC42BPGQ6DT37 1551 aa28.83■■■□□ 2.21
CHRNA7-228ENST00000637519 KCNA6P17658 529 aa28.82■■■□□ 2.2
CHRNA7-228ENST00000637519 SETD1BQ9UPS6 1966 aaKnown RBP28.78■■■□□ 2.2
CHRNA7-228ENST00000637519 FBLN1P23142 703 aa28.77■■■□□ 2.2
CHRNA7-228ENST00000637519 EDC4Q6P2E9 1401 aaKnown RBP28.76■■■□□ 2.2
CHRNA7-228ENST00000637519 NME9Q86XW9 330 aa28.76■■■□□ 2.19
CHRNA7-228ENST00000637519 ZRANB1Q9UGI0 708 aa28.76■■■□□ 2.19
CHRNA7-228ENST00000637519 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
CHRNA7-228ENST00000637519 TOPAZ1Q8N9V7 1692 aa28.75■■■□□ 2.19
CHRNA7-228ENST00000637519 APAF1O14727 1248 aa28.75■■■□□ 2.19
CHRNA7-228ENST00000637519 MON2Q7Z3U7 1717 aa28.74■■■□□ 2.19
CHRNA7-228ENST00000637519 ITSN1Q15811 1721 aa28.74■■■□□ 2.19
CHRNA7-228ENST00000637519 CFAP53Q96M91 514 aa28.74■■■□□ 2.19
CHRNA7-228ENST00000637519 AKAP12Q02952 1782 aa28.73■■■□□ 2.19
CHRNA7-228ENST00000637519 RBM33Q96EV2 1170 aaKnown RBP28.73■■■□□ 2.19
CHRNA7-228ENST00000637519 PIK3R4Q99570 1358 aa28.72■■■□□ 2.19
CHRNA7-228ENST00000637519 PDE3BQ13370 1112 aa28.71■■■□□ 2.19
CHRNA7-228ENST00000637519 ACEP12821 1306 aa28.7■■■□□ 2.18
CHRNA7-228ENST00000637519 COL3A1P02461 1466 aaPredicted RBP28.69■■■□□ 2.18
CHRNA7-228ENST00000637519 NPHP4O75161 1426 aaPredicted RBP28.68■■■□□ 2.18
CHRNA7-228ENST00000637519 ZNF521Q96K83 1311 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms