RNA–Protein interactions for RNA: ENST00000637500.1

TCF4-287, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-287	ENST00000637500	GDF11	O95390	407 aa		4.31	□□□□□ -1.72
TCF4-287	ENST00000637500	BRICD5	Q6PL45	260 aa		4.31	□□□□□ -1.72
TCF4-287	ENST00000637500	KRTAP9-2	Q9BYQ4	174 aa		4.31	□□□□□ -1.72
TCF4-287	ENST00000637500	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.3	□□□□□ -1.72
TCF4-287	ENST00000637500	FMNL1	O95466	1100 aa	Predicted RBP	4.3	□□□□□ -1.72
TCF4-287	ENST00000637500	FAM161A	Q3B820	660 aa		4.3	□□□□□ -1.72
TCF4-287	ENST00000637500	MSS51	Q4VC12	460 aa		4.3	□□□□□ -1.72
TCF4-287	ENST00000637500	SLC27A5	Q9Y2P5	690 aa		4.3	□□□□□ -1.72
TCF4-287	ENST00000637500	KRTAP9-6	A0A140TA67	174 aa		4.29	□□□□□ -1.72
TCF4-287	ENST00000637500	SKOR1	P84550	965 aa		4.29	□□□□□ -1.72
TCF4-287	ENST00000637500	REPIN1	Q9BWE0	567 aa	Known RBP	4.29	□□□□□ -1.72
TCF4-287	ENST00000637500	SIAH2	O43255	324 aa		4.28	□□□□□ -1.72
TCF4-287	ENST00000637500	BMP1	P13497	986 aa		4.28	□□□□□ -1.72
TCF4-287	ENST00000637500	MMP16	P51512	607 aa		4.28	□□□□□ -1.72
TCF4-287	ENST00000637500	RC3H1	Q5TC82	1133 aa	Known RBP	4.28	□□□□□ -1.72
TCF4-287	ENST00000637500	ATP6V1A	P38606	617 aa		4.27	□□□□□ -1.73
TCF4-287	ENST00000637500	FUT2	Q10981	343 aa		4.27	□□□□□ -1.73
TCF4-287	ENST00000637500	PXYLP1	Q8TE99	480 aa		4.27	□□□□□ -1.73
TCF4-287	ENST00000637500	ZFP42	Q96MM3	310 aa		4.27	□□□□□ -1.73
TCF4-287	ENST00000637500	IGHA1	P01876	353 aa		4.26	□□□□□ -1.73
TCF4-287	ENST00000637500	CAPN5	O15484	640 aa	Predicted RBP	4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	FECH	P22830	423 aa		4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	WNT7B	P56706	349 aa		4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	RSPH4A	Q5TD94	716 aa		4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	RNF19B	Q6ZMZ0	732 aa		4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	ADAMTS8	Q9UP79	889 aa		4.25	□□□□□ -1.73
TCF4-287	ENST00000637500	ALDH1A1	P00352	501 aa		4.24	□□□□□ -1.73
TCF4-287	ENST00000637500	DXO	O77932	396 aa	Known RBP	4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	OAT	P04181	439 aa		4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	MLLT3	P42568	568 aa	Predicted RBP	4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	GCGR	P47871	477 aa		4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	GPAT2	Q6NUI2	795 aa		4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	4.23	□□□□□ -1.73
TCF4-287	ENST00000637500	KRT76	Q01546	638 aa		4.22	□□□□□ -1.73
TCF4-287	ENST00000637500	PSMG3-AS1	Q96PY0	264 aa		4.22	□□□□□ -1.73
TCF4-287	ENST00000637500	DAXX	Q9UER7	740 aa	Predicted RBP	4.22	□□□□□ -1.73
TCF4-287	ENST00000637500	RNF225	M0QZC1	329 aa	Predicted RBP	4.21	□□□□□ -1.74
TCF4-287	ENST00000637500	ADAM23	O75077	832 aa		4.21	□□□□□ -1.74
TCF4-287	ENST00000637500	METTL3	Q86U44	580 aa	Known RBP	4.21	□□□□□ -1.74
TCF4-287	ENST00000637500	SOBP	A7XYQ1	873 aa		4.2	□□□□□ -1.74
TCF4-287	ENST00000637500	FOXK2	Q01167	660 aa		4.2	□□□□□ -1.74
TCF4-287	ENST00000637500	KRTAP1-3	Q8IUG1	177 aa		4.2	□□□□□ -1.74
TCF4-287	ENST00000637500	PPFIA3	O75145	1194 aa		4.19	□□□□□ -1.74
TCF4-287	ENST00000637500	MRPL14	Q6P1L8	145 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-287	ENST00000637500	GPR161	Q8N6U8	529 aa	Known RBP	4.19	□□□□□ -1.74
TCF4-287	ENST00000637500	ARHGEF15	O94989	841 aa		4.18	□□□□□ -1.74
TCF4-287	ENST00000637500	ZNF385C	Q66K41	422 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-287	ENST00000637500	RDH13	Q8NBN7	331 aa		4.18	□□□□□ -1.74
TCF4-287	ENST00000637500	KLF16	Q9BXK1	252 aa	Predicted RBP	4.18	□□□□□ -1.74
TCF4-287	ENST00000637500	FCHSD2	O94868	740 aa		4.17	□□□□□ -1.74
TCF4-287	ENST00000637500	IRS1	P35568	1242 aa		4.17	□□□□□ -1.74
TCF4-287	ENST00000637500		Q3C1V9	767 aa		4.17	□□□□□ -1.74
TCF4-287	ENST00000637500	USB1	Q9BQ65	265 aa	Known RBP	4.17	□□□□□ -1.74
TCF4-287	ENST00000637500	WDR70	Q9NW82	654 aa		4.17	□□□□□ -1.74
TCF4-287	ENST00000637500	WASF2	Q9Y6W5	498 aa		4.17	□□□□□ -1.74
TCF4-287	ENST00000637500	NUTM2F	A1L443	756 aa		4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	DDX11L8	A8MPP1	907 aa		4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	ITGB2	P05107	769 aa		4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	PTCRA	Q6ISU1	281 aa	Predicted RBP	4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	KANK3	Q6NY19	840 aa		4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	MPND	Q8N594	471 aa		4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	PURB	Q96QR8	312 aa	Known RBP	4.16	□□□□□ -1.74
TCF4-287	ENST00000637500	SLURP2	P0DP57	97 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	TIMP2	P16035	220 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	SCARF1	Q14162	830 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	CCDC24	Q8N4L8	307 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	EHBP1	Q8NDI1	1231 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	WHAMM	Q8TF30	809 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	CNTNAP3B	Q96NU0	1288 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	CNTNAP3	Q9BZ76	1288 aa		4.15	□□□□□ -1.75
TCF4-287	ENST00000637500	SH3BP2	P78314	561 aa		4.14	□□□□□ -1.75
TCF4-287	ENST00000637500	GRIPAP1	Q4V328	841 aa		4.14	□□□□□ -1.75
TCF4-287	ENST00000637500	RNFT1	Q5M7Z0	435 aa		4.13	□□□□□ -1.75
TCF4-287	ENST00000637500	SULF1	Q8IWU6	871 aa		4.13	□□□□□ -1.75
TCF4-287	ENST00000637500	ARHGEF1	Q92888	912 aa	Known RBP	4.13	□□□□□ -1.75
TCF4-287	ENST00000637500	PHOX2B	Q99453	314 aa		4.13	□□□□□ -1.75
TCF4-287	ENST00000637500	NNT	Q13423	1086 aa		4.12	□□□□□ -1.75
TCF4-287	ENST00000637500		Q8N3U1	123 aa		4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	NLRP7	Q8WX94	980 aa		4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	BBX	Q8WY36	941 aa	Predicted RBP	4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	NANOS1	Q8WY41	292 aa	Known RBP	4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	SPOCK3	Q9BQ16	436 aa		4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	KRTAP4-12	Q9BQ66	201 aa		4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	COL25A1	Q9BXS0	654 aa	Predicted RBP	4.12	□□□□□ -1.75
TCF4-287	ENST00000637500	MSTN	O14793	375 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	MAN1A2	O60476	641 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	PROC	P04070	461 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	JUND	P17535	347 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	HIC1	Q14526	733 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	PLA2G4E	Q3MJ16	856 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	SVOP	Q8N4V2	548 aa		4.11	□□□□□ -1.75
TCF4-287	ENST00000637500	ADH1C	P00326	375 aa		4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	WDR4	P57081	412 aa	Known RBP	4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	LCE3B	Q5TA77	95 aa		4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	SCARF2	Q96GP6	870 aa	Predicted RBP	4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	KRTAP9-9	Q9BYP9	154 aa		4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	KRTAP9-4	Q9BYQ2	154 aa		4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	TLL2	Q9Y6L7	1015 aa		4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	SOS2	Q07890	1332 aa	Predicted RBP	4.1	□□□□□ -1.75
TCF4-287	ENST00000637500	PLEKHG3	A1L390	1219 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms