RNA–Protein interactions for RNA: ENST00000637340.1

EFHC1-232, Transcript of EF-hand domain containing 1, humanhuman

TSL 1 (best)

Gene EFHC1, Length 4,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-232ENST00000637340 ST18O60284 1047 aa13.63□□□□□ -0.23
EFHC1-232ENST00000637340 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
EFHC1-232ENST00000637340 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
EFHC1-232ENST00000637340 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
EFHC1-232ENST00000637340 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
EFHC1-232ENST00000637340 TOPBP1Q92547 1522 aa13.62□□□□□ -0.23
EFHC1-232ENST00000637340 C9orf84Q5VXU9 1444 aa13.62□□□□□ -0.23
EFHC1-232ENST00000637340 ATF7IPQ6VMQ6 1270 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 OFD1O75665 1012 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 MAP7D2Q96T17 732 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 THUMPD2Q9BTF0 503 aaKnown RBP13.61□□□□□ -0.23
EFHC1-232ENST00000637340 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 SPC24Q8NBT2 197 aa13.61□□□□□ -0.23
EFHC1-232ENST00000637340 ISY1Q9ULR0 285 aaKnown RBP13.6□□□□□ -0.23
EFHC1-232ENST00000637340 NUCB2P80303 420 aa13.6□□□□□ -0.23
EFHC1-232ENST00000637340 ZNF592Q92610 1267 aa13.6□□□□□ -0.23
EFHC1-232ENST00000637340 CD2BP2O95400 341 aaKnown RBP13.6□□□□□ -0.23
EFHC1-232ENST00000637340 HMOX1P09601 288 aa13.6□□□□□ -0.23
EFHC1-232ENST00000637340 C17orf53Q8N3J3 647 aaPredicted RBP13.6□□□□□ -0.23
EFHC1-232ENST00000637340 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
EFHC1-232ENST00000637340 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
EFHC1-232ENST00000637340 KIF3BO15066 747 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 ZSCAN23Q3MJ62 389 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 CAMSAP2Q08AD1 1489 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
EFHC1-232ENST00000637340 RILPL2Q969X0 211 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 CCDC39Q9UFE4 941 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 NEK4P51957 841 aa13.59□□□□□ -0.23
EFHC1-232ENST00000637340 TBC1D9Q6ZT07 1266 aa13.58□□□□□ -0.24
EFHC1-232ENST00000637340 PLEKHH2Q8IVE3 1493 aa13.58□□□□□ -0.24
EFHC1-232ENST00000637340 ZMYM4Q5VZL5 1548 aa13.58□□□□□ -0.24
EFHC1-232ENST00000637340 DTNBO60941 627 aa13.58□□□□□ -0.24
EFHC1-232ENST00000637340 CDC45O75419 566 aa13.57□□□□□ -0.24
EFHC1-232ENST00000637340 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
EFHC1-232ENST00000637340 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
EFHC1-232ENST00000637340 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
EFHC1-232ENST00000637340 BLMP54132 1417 aaPredicted RBP13.56□□□□□ -0.24
EFHC1-232ENST00000637340 PKP1Q13835 747 aa13.56□□□□□ -0.24
EFHC1-232ENST00000637340 RAB3GAP1Q15042 981 aa13.56□□□□□ -0.24
EFHC1-232ENST00000637340 ZGPATQ8N5A5 531 aaKnown RBP13.56□□□□□ -0.24
EFHC1-232ENST00000637340 SYAP1Q96A49 352 aaPredicted RBP13.56□□□□□ -0.24
EFHC1-232ENST00000637340 NPHP1O15259 732 aa13.56□□□□□ -0.24
EFHC1-232ENST00000637340 SMARCA5O60264 1052 aaPredicted RBP13.55□□□□□ -0.24
EFHC1-232ENST00000637340 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 USP25Q9UHP3 1055 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 ANO2Q9NQ90 1003 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 KIAA0586Q9BVV6 1533 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 GGT6Q6P531 493 aa13.55□□□□□ -0.24
EFHC1-232ENST00000637340 LARP6Q9BRS8 491 aaKnown RBP13.55□□□□□ -0.24
EFHC1-232ENST00000637340 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
EFHC1-232ENST00000637340 TCOF1Q13428 1488 aaKnown RBP13.54□□□□□ -0.24
EFHC1-232ENST00000637340 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
EFHC1-232ENST00000637340 SASS6Q6UVJ0 657 aa13.54□□□□□ -0.24
EFHC1-232ENST00000637340 TSPY26PQ9H489 355 aa13.54□□□□□ -0.24
EFHC1-232ENST00000637340 CARD14Q9BXL6 1004 aa13.53□□□□□ -0.24
EFHC1-232ENST00000637340 KDM5CP41229 1560 aa13.53□□□□□ -0.24
EFHC1-232ENST00000637340 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
EFHC1-232ENST00000637340 TRERF1Q96PN7 1200 aa13.53□□□□□ -0.24
EFHC1-232ENST00000637340 FBLN1P23142 703 aa13.52□□□□□ -0.24
EFHC1-232ENST00000637340 WDR63Q8IWG1 891 aa13.52□□□□□ -0.24
EFHC1-232ENST00000637340 UPF3BQ9BZI7 483 aaKnown RBP13.52□□□□□ -0.24
EFHC1-232ENST00000637340 TROQ12816 1431 aaPredicted RBP13.52□□□□□ -0.24
EFHC1-232ENST00000637340 GOLGA6L4A6NEF3 574 aa13.52□□□□□ -0.25
EFHC1-232ENST00000637340 FIBPO43427 364 aa13.52□□□□□ -0.25
EFHC1-232ENST00000637340 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
EFHC1-232ENST00000637340 CGNQ9P2M7 1197 aaKnown RBP13.52□□□□□ -0.25
EFHC1-232ENST00000637340 PRAG1Q86YV5 1406 aa13.52□□□□□ -0.25
EFHC1-232ENST00000637340 ZNF521Q96K83 1311 aa13.52□□□□□ -0.25
EFHC1-232ENST00000637340 ZKSCAN5Q9Y2L8 839 aa13.52□□□□□ -0.25
EFHC1-232ENST00000637340 RABEP1Q15276 862 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 MCCP23508 829 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 TSHZ3Q63HK5 1081 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 BBXQ8WY36 941 aaPredicted RBP13.51□□□□□ -0.25
EFHC1-232ENST00000637340 PLB1Q6P1J6 1458 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
EFHC1-232ENST00000637340 CHMP4BQ9H444 224 aaKnown RBP13.51□□□□□ -0.25
EFHC1-232ENST00000637340 AAMPQ13685 434 aa13.5□□□□□ -0.25
EFHC1-232ENST00000637340 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
EFHC1-232ENST00000637340 MTERF4Q7Z6M4 381 aaKnown RBP13.5□□□□□ -0.25
EFHC1-232ENST00000637340 ARHGEF11O15085 1522 aa13.5□□□□□ -0.25
EFHC1-232ENST00000637340 KCNJ4P48050 445 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 TMPOP42166 694 aaKnown RBP13.49□□□□□ -0.25
EFHC1-232ENST00000637340 FBXW7Q969H0 707 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 IFT57Q9NWB7 429 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 NINLQ9Y2I6 1382 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 MINK1Q8N4C8 1332 aaPredicted RBP13.49□□□□□ -0.25
EFHC1-232ENST00000637340 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
EFHC1-232ENST00000637340 PDCL2Q8N4E4 241 aa13.48□□□□□ -0.25
EFHC1-232ENST00000637340 AFAP1Q8N556 730 aa13.48□□□□□ -0.25
EFHC1-232ENST00000637340 KIF3AQ9Y496 699 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms