RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-238ENST00000637276 CCDC191Q8NCU4 936 aa19.76■□□□□ 0.75
CACNA1A-238ENST00000637276 TERF2IPQ9NYB0 399 aa19.76■□□□□ 0.75
CACNA1A-238ENST00000637276 TANGO6Q9C0B7 1094 aa19.76■□□□□ 0.75
CACNA1A-238ENST00000637276 HMOX1P09601 288 aa19.76■□□□□ 0.75
CACNA1A-238ENST00000637276 AXDND1Q5T1B0 1012 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 RNF214Q8ND24 703 aa19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 SPC24Q8NBT2 197 aa19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 CPLX2Q6PUV4 134 aaKnown RBP19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 TMEM87AQ8NBN3 555 aa19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 RALBP1Q15311 655 aa19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 KANK4Q5T7N3 995 aaPredicted RBP19.75■□□□□ 0.75
CACNA1A-238ENST00000637276 WRNQ14191 1432 aaPredicted RBP eCLIP19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 E9PSI1 815 aa19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 TAF3Q5VWG9 929 aa19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 BICDL1Q6ZP65 573 aa19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 RBM25P49756 843 aaKnown RBP19.74■□□□□ 0.75
CACNA1A-238ENST00000637276 STK3Q13188 491 aa19.73■□□□□ 0.75
CACNA1A-238ENST00000637276 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
CACNA1A-238ENST00000637276 HOOK1Q9UJC3 728 aaKnown RBP19.73■□□□□ 0.75
CACNA1A-238ENST00000637276 CCDC173Q0VFZ6 552 aa19.72■□□□□ 0.75
CACNA1A-238ENST00000637276 G3BP1Q13283 466 aaKnown RBP eCLIP19.72■□□□□ 0.75
CACNA1A-238ENST00000637276 LIG1P18858 919 aa19.72■□□□□ 0.75
CACNA1A-238ENST00000637276 WWC3Q9ULE0 1092 aa19.72■□□□□ 0.75
CACNA1A-238ENST00000637276 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
CACNA1A-238ENST00000637276 ARHGAP35Q9NRY4 1499 aa19.71■□□□□ 0.75
CACNA1A-238ENST00000637276 FKBP5Q13451 457 aaPredicted RBP19.7■□□□□ 0.74
CACNA1A-238ENST00000637276 OLFM4Q6UX06 510 aa19.7■□□□□ 0.74
CACNA1A-238ENST00000637276 RDXP35241 583 aaKnown RBP19.7■□□□□ 0.74
CACNA1A-238ENST00000637276 SAFBQ15424 915 aaKnown RBP eCLIP19.7■□□□□ 0.74
CACNA1A-238ENST00000637276 PANK3Q9H999 370 aa19.7■□□□□ 0.74
CACNA1A-238ENST00000637276 SSBP05455 408 aaKnown RBP eCLIP19.69■□□□□ 0.74
CACNA1A-238ENST00000637276 RBM10P98175 930 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-238ENST00000637276 EEA1Q15075 1411 aa19.69■□□□□ 0.74
CACNA1A-238ENST00000637276 PDE4AP27815 886 aa19.69■□□□□ 0.74
CACNA1A-238ENST00000637276 GSE1Q14687 1217 aa19.69■□□□□ 0.74
CACNA1A-238ENST00000637276 COG3Q96JB2 828 aa19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 SMC3Q9UQE7 1217 aa19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 RALYLQ86SE5 291 aaKnown RBP19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 SCLT1Q96NL6 688 aa19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 TTLL12Q14166 644 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 BCCIPQ9P287 314 aaKnown RBP eCLIP19.68■□□□□ 0.74
CACNA1A-238ENST00000637276 CDR1P51861 262 aa19.67■□□□□ 0.74
CACNA1A-238ENST00000637276 HSP90AB4PQ58FF6 505 aa19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 CLASRPQ8N2M8 674 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 HDAC5Q9UQL6 1122 aa19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 USP5P45974 858 aa19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 ZKSCAN1P17029 563 aaPredicted RBP19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
CACNA1A-238ENST00000637276 SLC4A8Q2Y0W8 1093 aa19.65■□□□□ 0.74
CACNA1A-238ENST00000637276 TMX1Q9H3N1 280 aa19.65■□□□□ 0.74
CACNA1A-238ENST00000637276 NLRP2Q9NX02 1062 aa19.65■□□□□ 0.74
CACNA1A-238ENST00000637276 MAGEC2Q9UBF1 373 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-238ENST00000637276 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-238ENST00000637276 HSP90B2PQ58FF3 399 aa19.64■□□□□ 0.74
CACNA1A-238ENST00000637276 EIF3AQ14152 1382 aaKnown RBP19.64■□□□□ 0.74
CACNA1A-238ENST00000637276 TNNT1P13805 278 aa19.64■□□□□ 0.74
CACNA1A-238ENST00000637276 NF2P35240 595 aa19.64■□□□□ 0.73
CACNA1A-238ENST00000637276 SIL1Q9H173 461 aa19.64■□□□□ 0.73
CACNA1A-238ENST00000637276 NUP133Q8WUM0 1156 aa19.64■□□□□ 0.73
CACNA1A-238ENST00000637276 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
CACNA1A-238ENST00000637276 C11orf95C9JLR9 678 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-238ENST00000637276 L3MBTL2Q969R5 705 aa19.62■□□□□ 0.73
CACNA1A-238ENST00000637276 SRRTQ9BXP5 876 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-238ENST00000637276 ZBTB9Q96C00 473 aa19.62■□□□□ 0.73
CACNA1A-238ENST00000637276 DNA2P51530 1060 aa19.62■□□□□ 0.73
CACNA1A-238ENST00000637276 DDX54Q8TDD1 881 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 ZRSR2Q15696 482 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 RSPH6AQ9H0K4 717 aa19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 TNIKQ9UKE5 1360 aa19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 GOLGA6L10A0A0M3HER8 536 aa19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 GOLGA6L10A6NI86 522 aa19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 TSPYL4Q9UJ04 414 aa19.61■□□□□ 0.73
CACNA1A-238ENST00000637276 DEF6Q9H4E7 631 aa19.6■□□□□ 0.73
CACNA1A-238ENST00000637276 CBX1P83916 185 aa19.6■□□□□ 0.73
CACNA1A-238ENST00000637276 CCDC113Q9H0I3 377 aa19.6■□□□□ 0.73
CACNA1A-238ENST00000637276 DCTN1Q14203 1278 aa19.6■□□□□ 0.73
CACNA1A-238ENST00000637276 CT47B1P0C2W7 299 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 TERF1P54274 439 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 SDF4Q9BRK5 362 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 RUFY2Q8WXA3 655 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 CNNM1Q9NRU3 951 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 CCDC181Q5TID7 509 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 CCDC73Q6ZRK6 1079 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 COMMD10Q9Y6G5 202 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 NOM1Q5C9Z4 860 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 CHMP4AQ9BY43 222 aa19.59■□□□□ 0.73
CACNA1A-238ENST00000637276 CUX2O14529 1486 aa19.58■□□□□ 0.73
CACNA1A-238ENST00000637276 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.73
CACNA1A-238ENST00000637276 ATF3P18847 181 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 NFKBIBQ15653 356 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 LRRFIP1Q32MZ4 808 aaKnown RBP19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 LNPKQ9C0E8 428 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 TTC39AQ5SRH9 613 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 CENPQQ7L2Z9 268 aaPredicted RBP19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 ATP6V1DQ9Y5K8 247 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 ZKSCAN2Q63HK3 967 aa19.58■□□□□ 0.72
CACNA1A-238ENST00000637276 C1orf115Q9H7X2 142 aa19.57■□□□□ 0.72
CACNA1A-238ENST00000637276 ST20-MTHFSA0A0A6YYL1 179 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms