RNA–Protein interactions for RNA: ENST00000636957.1

CHRNA7-222, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 622 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-222ENST00000636957 PROSER2Q86WR7 435 aaPredicted RBP12.92□□□□□ -0.34
CHRNA7-222ENST00000636957 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
CHRNA7-222ENST00000636957 TMEM94Q12767 1356 aa12.92□□□□□ -0.34
CHRNA7-222ENST00000636957 ROBO2Q9HCK4 1378 aa12.92□□□□□ -0.34
CHRNA7-222ENST00000636957 FAM135BQ49AJ0 1406 aa12.91□□□□□ -0.34
CHRNA7-222ENST00000636957 CERKQ8TCT0 537 aa12.91□□□□□ -0.34
CHRNA7-222ENST00000636957 ROCK2O75116 1388 aaKnown RBP12.91□□□□□ -0.34
CHRNA7-222ENST00000636957 GPRASP1Q5JY77 1395 aa12.91□□□□□ -0.34
CHRNA7-222ENST00000636957 QRICH2Q9H0J4 1663 aa12.9□□□□□ -0.34
CHRNA7-222ENST00000636957 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
CHRNA7-222ENST00000636957 STK26Q9P289 416 aa12.9□□□□□ -0.34
CHRNA7-222ENST00000636957 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
CHRNA7-222ENST00000636957 SIRT1Q96EB6 747 aa12.88□□□□□ -0.35
CHRNA7-222ENST00000636957 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
CHRNA7-222ENST00000636957 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
CHRNA7-222ENST00000636957 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
CHRNA7-222ENST00000636957 MSH6P52701 1360 aa12.87□□□□□ -0.35
CHRNA7-222ENST00000636957 ABCB7O75027 752 aa12.87□□□□□ -0.35
CHRNA7-222ENST00000636957 FMN2Q9NZ56 1722 aa12.87□□□□□ -0.35
CHRNA7-222ENST00000636957 DCCP43146 1447 aa12.87□□□□□ -0.35
CHRNA7-222ENST00000636957 RBM33Q96EV2 1170 aaKnown RBP12.86□□□□□ -0.35
CHRNA7-222ENST00000636957 TRAK1Q9UPV9 953 aa12.86□□□□□ -0.35
CHRNA7-222ENST00000636957 PLEKHH1Q9ULM0 1364 aa12.85□□□□□ -0.35
CHRNA7-222ENST00000636957 RGPD8O14715 1765 aaPredicted RBP12.85□□□□□ -0.35
CHRNA7-222ENST00000636957 C14orf37Q86TY3 774 aa12.85□□□□□ -0.35
CHRNA7-222ENST00000636957 EIF3AQ14152 1382 aaKnown RBP12.84□□□□□ -0.35
CHRNA7-222ENST00000636957 WAPLQ7Z5K2 1190 aa12.84□□□□□ -0.35
CHRNA7-222ENST00000636957 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
CHRNA7-222ENST00000636957 CARD11Q9BXL7 1154 aa12.84□□□□□ -0.35
CHRNA7-222ENST00000636957 C19orf44Q9H6X5 657 aa12.84□□□□□ -0.35
CHRNA7-222ENST00000636957 ITSN1Q15811 1721 aa12.83□□□□□ -0.36
CHRNA7-222ENST00000636957 POGKQ9P215 609 aa12.83□□□□□ -0.36
CHRNA7-222ENST00000636957 ROBO1Q9Y6N7 1651 aa12.81□□□□□ -0.36
CHRNA7-222ENST00000636957 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
CHRNA7-222ENST00000636957 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
CHRNA7-222ENST00000636957 ATF3P18847 181 aa12.8□□□□□ -0.36
CHRNA7-222ENST00000636957 SAFB2Q14151 953 aaKnown RBP eCLIP12.8□□□□□ -0.36
CHRNA7-222ENST00000636957 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
CHRNA7-222ENST00000636957 UBAP1LF5GYI3 381 aa12.79□□□□□ -0.36
CHRNA7-222ENST00000636957 TOM1O60784 492 aa12.79□□□□□ -0.36
CHRNA7-222ENST00000636957 USP47Q96K76 1375 aa12.79□□□□□ -0.36
CHRNA7-222ENST00000636957 SBNO2Q9Y2G9 1366 aa12.79□□□□□ -0.36
CHRNA7-222ENST00000636957 MST1RQ04912 1400 aa12.79□□□□□ -0.36
CHRNA7-222ENST00000636957 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
CHRNA7-222ENST00000636957 MINK1Q8N4C8 1332 aaPredicted RBP12.78□□□□□ -0.36
CHRNA7-222ENST00000636957 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
CHRNA7-222ENST00000636957 KIF1AQ12756 1690 aa12.77□□□□□ -0.36
CHRNA7-222ENST00000636957 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
CHRNA7-222ENST00000636957 NHSL1Q5SYE7 1610 aa12.77□□□□□ -0.37
CHRNA7-222ENST00000636957 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
CHRNA7-222ENST00000636957 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
CHRNA7-222ENST00000636957 FBXO41Q8TF61 875 aa12.75□□□□□ -0.37
CHRNA7-222ENST00000636957 HIRIP3Q9BW71 556 aaPredicted RBP12.75□□□□□ -0.37
CHRNA7-222ENST00000636957 SLAIN2Q9P270 581 aa12.75□□□□□ -0.37
CHRNA7-222ENST00000636957 ATP7BP35670 1465 aa12.74□□□□□ -0.37
CHRNA7-222ENST00000636957 KCNA4P22459 653 aa12.74□□□□□ -0.37
CHRNA7-222ENST00000636957 PHLPP1O60346 1717 aa12.74□□□□□ -0.37
CHRNA7-222ENST00000636957 WASLO00401 505 aaPredicted RBP12.73□□□□□ -0.37
CHRNA7-222ENST00000636957 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
CHRNA7-222ENST00000636957 ST20-MTHFSA0A0A6YYL1 179 aa12.72□□□□□ -0.37
CHRNA7-222ENST00000636957 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
CHRNA7-222ENST00000636957 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
CHRNA7-222ENST00000636957 EVC2Q86UK5 1308 aa12.71□□□□□ -0.37
CHRNA7-222ENST00000636957 SLC24A1O60721 1099 aa12.71□□□□□ -0.37
CHRNA7-222ENST00000636957 EIF4G2P78344 907 aaKnown RBP eCLIP12.71□□□□□ -0.37
CHRNA7-222ENST00000636957 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
CHRNA7-222ENST00000636957 TESK2Q96S53 571 aa12.7□□□□□ -0.38
CHRNA7-222ENST00000636957 CDK19Q9BWU1 502 aa12.7□□□□□ -0.38
CHRNA7-222ENST00000636957 AKAP12Q02952 1782 aa12.7□□□□□ -0.38
CHRNA7-222ENST00000636957 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
CHRNA7-222ENST00000636957 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
CHRNA7-222ENST00000636957 BRINP3Q76B58 766 aa12.69□□□□□ -0.38
CHRNA7-222ENST00000636957 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
CHRNA7-222ENST00000636957 MYOM1P52179 1685 aa12.68□□□□□ -0.38
CHRNA7-222ENST00000636957 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
CHRNA7-222ENST00000636957 HSPA5P11021 654 aaKnown RBP12.67□□□□□ -0.38
CHRNA7-222ENST00000636957 ESCO1Q5FWF5 840 aa12.67□□□□□ -0.38
CHRNA7-222ENST00000636957 NUDT16Q96DE0 195 aaKnown RBP12.67□□□□□ -0.38
CHRNA7-222ENST00000636957 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
CHRNA7-222ENST00000636957 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
CHRNA7-222ENST00000636957 MON2Q7Z3U7 1717 aa12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 PPIP5K1Q6PFW1 1433 aa12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 TMF1P82094 1093 aa12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
CHRNA7-222ENST00000636957 SHPRHQ149N8 1683 aa12.65□□□□□ -0.38
CHRNA7-222ENST00000636957 PUS7Q96PZ0 661 aaKnown RBP12.65□□□□□ -0.38
CHRNA7-222ENST00000636957 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
CHRNA7-222ENST00000636957 CCDC61Q9Y6R9 512 aa12.65□□□□□ -0.38
CHRNA7-222ENST00000636957 PXDNQ92626 1479 aa12.65□□□□□ -0.38
CHRNA7-222ENST00000636957 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
CHRNA7-222ENST00000636957 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
CHRNA7-222ENST00000636957 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
CHRNA7-222ENST00000636957 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
CHRNA7-222ENST00000636957 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
CHRNA7-222ENST00000636957 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
CHRNA7-222ENST00000636957 PLEKHG3A1L390 1219 aa12.62□□□□□ -0.39
CHRNA7-222ENST00000636957 HSPA1LP34931 641 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms