RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 KRT27Q7Z3Y8 459 aa5.53□□□□□ -1.52
CHD2-225ENST00000636861 RSPH6AQ9H0K4 717 aa5.53□□□□□ -1.52
CHD2-225ENST00000636861 GPBP1L1Q9HC44 474 aaPredicted RBP5.53□□□□□ -1.52
CHD2-225ENST00000636861 SALL2Q9Y467 1007 aaPredicted RBP5.53□□□□□ -1.52
CHD2-225ENST00000636861 PTCH1Q13635 1447 aa5.53□□□□□ -1.52
CHD2-225ENST00000636861 KIF27Q86VH2 1401 aa5.53□□□□□ -1.52
CHD2-225ENST00000636861 ARHGAP35Q9NRY4 1499 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 USP19O94966 1318 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 GGT6Q6P531 493 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 ZNF526Q8TF50 670 aaPredicted RBP5.52□□□□□ -1.53
CHD2-225ENST00000636861 USP35Q9P2H5 1018 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 NOP58Q9Y2X3 529 aaKnown RBP5.52□□□□□ -1.53
CHD2-225ENST00000636861 CROCC2H7BZ55 1655 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 UNC80Q8N2C7 3258 aa5.52□□□□□ -1.53
CHD2-225ENST00000636861 COL22A1Q8NFW1 1626 aaPredicted RBP5.52□□□□□ -1.53
CHD2-225ENST00000636861 CFAP65Q6ZU64 1925 aaKnown RBP5.51□□□□□ -1.53
CHD2-225ENST00000636861 FKBP8Q14318 412 aa5.51□□□□□ -1.53
CHD2-225ENST00000636861 EFCAB2Q5VUJ9 269 aa5.51□□□□□ -1.53
CHD2-225ENST00000636861 ADGRB2O60241 1585 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 ARHGAP5Q13017 1502 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 TMEM131LA2VDJ0 1609 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 LRRC59Q96AG4 307 aaKnown RBP5.5□□□□□ -1.53
CHD2-225ENST00000636861 ABHD8Q96I13 439 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 SGIP1Q9BQI5 828 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 MYOM2P54296 1465 aa5.5□□□□□ -1.53
CHD2-225ENST00000636861 EEA1Q15075 1411 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 FMN1Q68DA7 1419 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 SLIT2O94813 1529 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 C11orf95C9JLR9 678 aaPredicted RBP5.49□□□□□ -1.53
CHD2-225ENST00000636861 ZBTB7AO95365 584 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 GPR162Q16538 588 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 P3H3Q8IVL6 736 aa5.49□□□□□ -1.53
CHD2-225ENST00000636861 MKI67P46013 3256 aaKnown RBP5.49□□□□□ -1.53
CHD2-225ENST00000636861 USP32Q8NFA0 1604 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 PLEKHD1A6NEE1 506 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 MSH5O43196 834 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 ONECUT3O60422 494 aaPredicted RBP5.48□□□□□ -1.53
CHD2-225ENST00000636861 ANP32AP39687 249 aaKnown RBP5.48□□□□□ -1.53
CHD2-225ENST00000636861 TXNDC2Q86VQ3 553 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 SLC26A8Q96RN1 970 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 LAMC1P11047 1609 aa5.48□□□□□ -1.53
CHD2-225ENST00000636861 INO80Q9ULG1 1556 aaPredicted RBP5.47□□□□□ -1.53
CHD2-225ENST00000636861 MAP3K5Q99683 1374 aa5.47□□□□□ -1.53
CHD2-225ENST00000636861 RANGAP1P46060 587 aaPredicted RBP5.47□□□□□ -1.53
CHD2-225ENST00000636861 CCDC136Q96JN2 1154 aa5.47□□□□□ -1.53
CHD2-225ENST00000636861 ATF5Q9Y2D1 282 aaPredicted RBP5.47□□□□□ -1.53
CHD2-225ENST00000636861 MST1RQ04912 1400 aa5.47□□□□□ -1.53
CHD2-225ENST00000636861 PARD3Q8TEW0 1356 aa5.46□□□□□ -1.54
CHD2-225ENST00000636861 SPTBN5Q9NRC6 3674 aaKnown RBP5.46□□□□□ -1.54
CHD2-225ENST00000636861 YBX3P16989 372 aaKnown RBP eCLIP5.46□□□□□ -1.54
CHD2-225ENST00000636861 UNC5CLQ8IV45 518 aa5.45□□□□□ -1.54
CHD2-225ENST00000636861 BCANQ96GW7 911 aa5.45□□□□□ -1.54
CHD2-225ENST00000636861 PLCH1Q4KWH8 1693 aa5.44□□□□□ -1.54
CHD2-225ENST00000636861 CCER2I3L3R5 266 aa5.44□□□□□ -1.54
CHD2-225ENST00000636861 PPM1GO15355 546 aaPredicted RBP5.44□□□□□ -1.54
CHD2-225ENST00000636861 CADPS2Q86UW7 1296 aa5.44□□□□□ -1.54
CHD2-225ENST00000636861 ARHGEF28Q8N1W1 1705 aaKnown RBP5.44□□□□□ -1.54
CHD2-225ENST00000636861 NCOA3Q9Y6Q9 1424 aa5.43□□□□□ -1.54
CHD2-225ENST00000636861 FOXN1O15353 648 aa5.43□□□□□ -1.54
CHD2-225ENST00000636861 TRIM37O94972 964 aa5.43□□□□□ -1.54
CHD2-225ENST00000636861 ERVK-7P63135 1459 aa5.43□□□□□ -1.54
CHD2-225ENST00000636861 THSD7AQ9UPZ6 1657 aa5.43□□□□□ -1.54
CHD2-225ENST00000636861 PREX2Q70Z35 1606 aa5.42□□□□□ -1.54
CHD2-225ENST00000636861 HNRNPMP52272 730 aaKnown RBP eCLIP5.42□□□□□ -1.54
CHD2-225ENST00000636861 NBPF8Q3BBV2 869 aa5.42□□□□□ -1.54
CHD2-225ENST00000636861 NBPF14Q5TI25 921 aa5.42□□□□□ -1.54
CHD2-225ENST00000636861 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.42□□□□□ -1.54
CHD2-225ENST00000636861 ZBTB47Q9UFB7 747 aaPredicted RBP5.42□□□□□ -1.54
CHD2-225ENST00000636861 PKD1L2Q7Z442 2459 aa5.42□□□□□ -1.54
CHD2-225ENST00000636861 MUC3AQ02505 3323 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 PIK3C2BO00750 1634 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 CEP162Q5TB80 1403 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 UNC79Q9P2D8 2635 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 CCDC85CA6NKD9 419 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 TOMM70O94826 608 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 APBA3O96018 575 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 ATF3P18847 181 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 NBR1Q14596 966 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 FAM43AQ8N2R8 423 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 C19orf44Q9H6X5 657 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 PRDM10Q9NQV6 1147 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 PPP4R2Q9NY27 417 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 ADGRB3O60242 1522 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 WASHC2CQ9Y4E1 1318 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 TMEM2Q9UHN6 1383 aa5.41□□□□□ -1.54
CHD2-225ENST00000636861 ABCC5O15440 1437 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 NRAPQ86VF7 1730 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 NWD2Q9ULI1 1742 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 SYCP2Q9BX26 1530 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 RRP9O43818 475 aaKnown RBP5.4□□□□□ -1.54
CHD2-225ENST00000636861 VPS72Q15906 364 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 PRPF38BQ5VTL8 546 aaKnown RBP5.4□□□□□ -1.54
CHD2-225ENST00000636861 NLGN2Q8NFZ4 835 aa5.4□□□□□ -1.54
CHD2-225ENST00000636861 IPO9Q96P70 1041 aaKnown RBP5.4□□□□□ -1.54
CHD2-225ENST00000636861 SOS2Q07890 1332 aaPredicted RBP5.4□□□□□ -1.55
CHD2-225ENST00000636861 WASHC2AQ641Q2 1341 aa5.4□□□□□ -1.55
CHD2-225ENST00000636861 BRCA2P51587 3418 aa5.39□□□□□ -1.55
CHD2-225ENST00000636861 NEFMP07197 916 aa5.39□□□□□ -1.55
CHD2-225ENST00000636861 ZNF326Q5BKZ1 582 aaKnown RBP5.39□□□□□ -1.55
CHD2-225ENST00000636861 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms