RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 PUS7Q96PZ0 661 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-231ENST00000636816 NPC1L1Q9UHC9 1359 aa21.43■■□□□ 1.02
CACNA1A-231ENST00000636816 SRPK2P78362 688 aaKnown RBP21.43■■□□□ 1.02
CACNA1A-231ENST00000636816 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
CACNA1A-231ENST00000636816 TXNDC2Q86VQ3 553 aa21.41■■□□□ 1.02
CACNA1A-231ENST00000636816 ABCC11Q96J66 1382 aa21.41■■□□□ 1.02
CACNA1A-231ENST00000636816 NSD3Q9BZ95 1437 aa21.41■■□□□ 1.02
CACNA1A-231ENST00000636816 RIMS1Q86UR5 1692 aaKnown RBP21.41■■□□□ 1.02
CACNA1A-231ENST00000636816 DLC1Q96QB1 1528 aa21.4■■□□□ 1.02
CACNA1A-231ENST00000636816 CDK19Q9BWU1 502 aa21.39■■□□□ 1.01
CACNA1A-231ENST00000636816 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
CACNA1A-231ENST00000636816 PLEKHG1Q9ULL1 1385 aa21.36■■□□□ 1.01
CACNA1A-231ENST00000636816 SLC26A8Q96RN1 970 aa21.35■■□□□ 1.01
CACNA1A-231ENST00000636816 EID1Q9Y6B2 187 aa21.35■■□□□ 1.01
CACNA1A-231ENST00000636816 SLIT1O75093 1534 aa21.34■■□□□ 1.01
CACNA1A-231ENST00000636816 ANKRD36BQ8N2N9 1353 aa21.34■■□□□ 1.01
CACNA1A-231ENST00000636816 ARHGAP23Q9P227 1491 aa21.34■■□□□ 1.01
CACNA1A-231ENST00000636816 THEMISQ8N1K5 641 aaPredicted RBP21.34■■□□□ 1.01
CACNA1A-231ENST00000636816 ADAMTSL3P82987 1691 aa21.33■■□□□ 1
CACNA1A-231ENST00000636816 KNDC1Q76NI1 1749 aa21.31■■□□□ 1
CACNA1A-231ENST00000636816 A0A1W2PP64 1363 aa21.31■■□□□ 1
CACNA1A-231ENST00000636816 ATAD2Q6PL18 1390 aa21.31■■□□□ 1
CACNA1A-231ENST00000636816 SUPT16HQ9Y5B9 1047 aaKnown RBP21.31■■□□□ 1
CACNA1A-231ENST00000636816 MED14O60244 1454 aa21.3■■□□□ 1
CACNA1A-231ENST00000636816 TECPR2O15040 1411 aa21.3■■□□□ 1
CACNA1A-231ENST00000636816 TNNT2P45379 298 aaPredicted RBP21.29■■□□□ 1
CACNA1A-231ENST00000636816 MORC1Q86VD1 984 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 CABP1Q9NZU7 370 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 ADAMTS8Q9UP79 889 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 USP32Q8NFA0 1604 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 CD163L1Q9NR16 1453 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 ROBO2Q9HCK4 1378 aa21.29■■□□□ 1
CACNA1A-231ENST00000636816 SIRT1Q96EB6 747 aa21.28■■□□□ 1
CACNA1A-231ENST00000636816 CGNL1Q0VF96 1302 aa21.28■■□□□ 1
CACNA1A-231ENST00000636816 NINLQ9Y2I6 1382 aa21.28■■□□□ 1
CACNA1A-231ENST00000636816 FAM135BQ49AJ0 1406 aa21.28■■□□□ 1
CACNA1A-231ENST00000636816 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
CACNA1A-231ENST00000636816 CPS1P31327 1500 aa21.28■■□□□ 1
CACNA1A-231ENST00000636816 CEP170BQ9Y4F5 1589 aaPredicted RBP21.28■■□□□ 1
CACNA1A-231ENST00000636816 PTPRUQ92729 1446 aa21.27■■□□□ 1
CACNA1A-231ENST00000636816 WASLO00401 505 aaPredicted RBP21.27■□□□□ 0.99
CACNA1A-231ENST00000636816 FKBP8Q14318 412 aa21.27■□□□□ 0.99
CACNA1A-231ENST00000636816 TERF2IPQ9NYB0 399 aa21.25■□□□□ 0.99
CACNA1A-231ENST00000636816 BLMP54132 1417 aaPredicted RBP21.24■□□□□ 0.99
CACNA1A-231ENST00000636816 TBX22Q9Y458 520 aa21.23■□□□□ 0.99
CACNA1A-231ENST00000636816 NCKAP5LQ9HCH0 1330 aa21.23■□□□□ 0.99
CACNA1A-231ENST00000636816 WDR43Q15061 677 aaKnown RBP eCLIP21.23■□□□□ 0.99
CACNA1A-231ENST00000636816 AMOTL2Q9Y2J4 779 aa21.22■□□□□ 0.99
CACNA1A-231ENST00000636816 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.22■□□□□ 0.99
CACNA1A-231ENST00000636816 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
CACNA1A-231ENST00000636816 HDGFL2Q7Z4V5 671 aaPredicted RBP21.21■□□□□ 0.99
CACNA1A-231ENST00000636816 INSRP06213 1382 aa21.2■□□□□ 0.98
CACNA1A-231ENST00000636816 FYB1O15117 783 aa21.19■□□□□ 0.98
CACNA1A-231ENST00000636816 NUDT16Q96DE0 195 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-231ENST00000636816 SMG6Q86US8 1419 aaKnown RBP21.19■□□□□ 0.98
CACNA1A-231ENST00000636816 SETD1BQ9UPS6 1966 aaKnown RBP21.18■□□□□ 0.98
CACNA1A-231ENST00000636816 NSD2O96028 1365 aa21.18■□□□□ 0.98
CACNA1A-231ENST00000636816 NEFLP07196 543 aa21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 NUDCQ9Y266 331 aa21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 PRR36Q9H6K5 1346 aa21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 PPIP5K1Q6PFW1 1433 aa21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 MTHFSP49914 203 aa21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 POLR3AO14802 1390 aaPredicted RBP21.17■□□□□ 0.98
CACNA1A-231ENST00000636816 ZNF142P52746 1687 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-231ENST00000636816 IRX6P78412 446 aaPredicted RBP21.16■□□□□ 0.98
CACNA1A-231ENST00000636816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.15■□□□□ 0.98
CACNA1A-231ENST00000636816 CCDC146Q8IYE0 955 aa21.15■□□□□ 0.98
CACNA1A-231ENST00000636816 ATP7BP35670 1465 aa21.14■□□□□ 0.98
CACNA1A-231ENST00000636816 NUTM2FA1L443 756 aa21.14■□□□□ 0.98
CACNA1A-231ENST00000636816 CCDC61Q9Y6R9 512 aa21.14■□□□□ 0.98
CACNA1A-231ENST00000636816 ANKLE2Q86XL3 938 aa21.14■□□□□ 0.97
CACNA1A-231ENST00000636816 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
CACNA1A-231ENST00000636816 CDCA7LQ96GN5 454 aa21.13■□□□□ 0.97
CACNA1A-231ENST00000636816 CPSF1Q10570 1443 aaKnown RBP21.13■□□□□ 0.97
CACNA1A-231ENST00000636816 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
CACNA1A-231ENST00000636816 KIF20BQ96Q89 1820 aa21.12■□□□□ 0.97
CACNA1A-231ENST00000636816 SHPRHQ149N8 1683 aa21.12■□□□□ 0.97
CACNA1A-231ENST00000636816 ADGRB2O60241 1585 aa21.11■□□□□ 0.97
CACNA1A-231ENST00000636816 KCNA6P17658 529 aa21.1■□□□□ 0.97
CACNA1A-231ENST00000636816 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
CACNA1A-231ENST00000636816 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
CACNA1A-231ENST00000636816 CDC42BPGQ6DT37 1551 aa21.08■□□□□ 0.97
CACNA1A-231ENST00000636816 FBLN1P23142 703 aa21.08■□□□□ 0.96
CACNA1A-231ENST00000636816 ZRANB1Q9UGI0 708 aa21.07■□□□□ 0.96
CACNA1A-231ENST00000636816 APAF1O14727 1248 aa21.06■□□□□ 0.96
CACNA1A-231ENST00000636816 PDE3BQ13370 1112 aa21.06■□□□□ 0.96
CACNA1A-231ENST00000636816 AKAP12Q02952 1782 aa21.06■□□□□ 0.96
CACNA1A-231ENST00000636816 NME9Q86XW9 330 aa21.06■□□□□ 0.96
CACNA1A-231ENST00000636816 EDC4Q6P2E9 1401 aaKnown RBP21.05■□□□□ 0.96
CACNA1A-231ENST00000636816 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
CACNA1A-231ENST00000636816 CFAP53Q96M91 514 aa21.05■□□□□ 0.96
CACNA1A-231ENST00000636816 ITSN1Q15811 1721 aa21.04■□□□□ 0.96
CACNA1A-231ENST00000636816 TOPAZ1Q8N9V7 1692 aa21.04■□□□□ 0.96
CACNA1A-231ENST00000636816 PIK3R4Q99570 1358 aa21.04■□□□□ 0.96
CACNA1A-231ENST00000636816 CHD2O14647 1828 aaKnown RBP21.04■□□□□ 0.96
CACNA1A-231ENST00000636816 RGPD8O14715 1765 aaPredicted RBP21.03■□□□□ 0.96
CACNA1A-231ENST00000636816 ACEP12821 1306 aa21.02■□□□□ 0.96
CACNA1A-231ENST00000636816 NKTRP30414 1462 aaKnown RBP21.02■□□□□ 0.95
CACNA1A-231ENST00000636816 ZNF521Q96K83 1311 aa21.02■□□□□ 0.95
CACNA1A-231ENST00000636816 PLEKHG3A1L390 1219 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms