RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 KDM5AP29375 1690 aaKnown RBP9.96□□□□□ -0.82
UPF3B-205ENST00000636792 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.82
UPF3B-205ENST00000636792 RIMBP2O15034 1052 aa9.95□□□□□ -0.82
UPF3B-205ENST00000636792 ARID4BQ4LE39 1312 aaPredicted RBP9.95□□□□□ -0.82
UPF3B-205ENST00000636792 NUP155O75694 1391 aa9.95□□□□□ -0.82
UPF3B-205ENST00000636792 SPATA31D1Q6ZQQ2 1576 aa9.95□□□□□ -0.82
UPF3B-205ENST00000636792 NPATQ14207 1427 aa9.94□□□□□ -0.82
UPF3B-205ENST00000636792 ERBB3P21860 1342 aa9.94□□□□□ -0.82
UPF3B-205ENST00000636792 NEURL4Q96JN8 1562 aa9.93□□□□□ -0.82
UPF3B-205ENST00000636792 TRPM2O94759 1503 aa9.93□□□□□ -0.82
UPF3B-205ENST00000636792 ESF1Q9H501 851 aaKnown RBP9.93□□□□□ -0.82
UPF3B-205ENST00000636792 SETD1BQ9UPS6 1966 aaKnown RBP9.93□□□□□ -0.82
UPF3B-205ENST00000636792 CLSPNQ9HAW4 1339 aa9.92□□□□□ -0.82
UPF3B-205ENST00000636792 WASHC2CQ9Y4E1 1318 aa9.92□□□□□ -0.82
UPF3B-205ENST00000636792 GGT6Q6P531 493 aa9.92□□□□□ -0.82
UPF3B-205ENST00000636792 PCGF6Q9BYE7 350 aa9.92□□□□□ -0.82
UPF3B-205ENST00000636792 ZNF142P52746 1687 aaPredicted RBP9.92□□□□□ -0.82
UPF3B-205ENST00000636792 PIK3C2BO00750 1634 aa9.92□□□□□ -0.82
UPF3B-205ENST00000636792 ERVK-7P63135 1459 aa9.91□□□□□ -0.82
UPF3B-205ENST00000636792 PTPRTO14522 1441 aa9.9□□□□□ -0.82
UPF3B-205ENST00000636792 NOS1P29475 1434 aa9.9□□□□□ -0.82
UPF3B-205ENST00000636792 PTPRMP28827 1452 aa9.9□□□□□ -0.83
UPF3B-205ENST00000636792 NLRP1Q9C000 1473 aa9.9□□□□□ -0.83
UPF3B-205ENST00000636792 ZMYM3Q14202 1370 aa9.89□□□□□ -0.83
UPF3B-205ENST00000636792 MYO3AQ8NEV4 1616 aa9.89□□□□□ -0.83
UPF3B-205ENST00000636792 TRIM52Q96A61 297 aa9.89□□□□□ -0.83
UPF3B-205ENST00000636792 KIF1BO60333 1816 aa9.89□□□□□ -0.83
UPF3B-205ENST00000636792 IFNLR1Q8IU57 520 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-205ENST00000636792 SYNMO15061 1565 aa9.88□□□□□ -0.83
UPF3B-205ENST00000636792 DHX57Q6P158 1386 aaKnown RBP9.88□□□□□ -0.83
UPF3B-205ENST00000636792 MPHOSPH9Q99550 1183 aa9.87□□□□□ -0.83
UPF3B-205ENST00000636792 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
UPF3B-205ENST00000636792 RNF166Q96A37 237 aaPredicted RBP9.86□□□□□ -0.83
UPF3B-205ENST00000636792 CCDC144AA2RUR9 1427 aa9.85□□□□□ -0.83
UPF3B-205ENST00000636792 MLECQ14165 292 aa9.85□□□□□ -0.83
UPF3B-205ENST00000636792 VARS2Q5ST30 1063 aaKnown RBP9.85□□□□□ -0.83
UPF3B-205ENST00000636792 CFAP65Q6ZU64 1925 aaKnown RBP9.85□□□□□ -0.83
UPF3B-205ENST00000636792 ADGRB3O60242 1522 aa9.85□□□□□ -0.83
UPF3B-205ENST00000636792 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
UPF3B-205ENST00000636792 CEP170BQ9Y4F5 1589 aaPredicted RBP9.84□□□□□ -0.83
UPF3B-205ENST00000636792 PKD2Q13563 968 aa9.84□□□□□ -0.83
UPF3B-205ENST00000636792 ZSWIM6Q9HCJ5 1215 aa9.84□□□□□ -0.83
UPF3B-205ENST00000636792 TNRQ92752 1358 aa9.84□□□□□ -0.83
UPF3B-205ENST00000636792 ANKRD30BQ9BXX2 1392 aa9.84□□□□□ -0.83
UPF3B-205ENST00000636792 UBR1Q8IWV7 1749 aa9.84□□□□□ -0.83
UPF3B-205ENST00000636792 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
UPF3B-205ENST00000636792 A2ML1A8K2U0 1454 aa9.83□□□□□ -0.84
UPF3B-205ENST00000636792 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
UPF3B-205ENST00000636792 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
UPF3B-205ENST00000636792 IFT172Q9UG01 1749 aa9.82□□□□□ -0.84
UPF3B-205ENST00000636792 UHRF1BP1Q6BDS2 1440 aa9.82□□□□□ -0.84
UPF3B-205ENST00000636792 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
UPF3B-205ENST00000636792 UGGT1Q9NYU2 1555 aa9.8□□□□□ -0.84
UPF3B-205ENST00000636792 KDM4FA0A1W2PPD8 638 aa9.8□□□□□ -0.84
UPF3B-205ENST00000636792 MYO5BQ9ULV0 1848 aa9.79□□□□□ -0.84
UPF3B-205ENST00000636792 PPLO60437 1756 aa9.79□□□□□ -0.84
UPF3B-205ENST00000636792 SLIT1O75093 1534 aa9.79□□□□□ -0.84
UPF3B-205ENST00000636792 ZNF687Q8N1G0 1237 aa9.79□□□□□ -0.84
UPF3B-205ENST00000636792 STAC3Q96MF2 364 aa9.79□□□□□ -0.84
UPF3B-205ENST00000636792 POLR1AO95602 1720 aaPredicted RBP9.79□□□□□ -0.84
UPF3B-205ENST00000636792 SOX12O15370 315 aa9.78□□□□□ -0.84
UPF3B-205ENST00000636792 LAMC1P11047 1609 aa9.78□□□□□ -0.84
UPF3B-205ENST00000636792 SPATA31E1Q6ZUB1 1445 aa9.77□□□□□ -0.85
UPF3B-205ENST00000636792 PTGER2P43116 358 aa9.77□□□□□ -0.85
UPF3B-205ENST00000636792 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.85
UPF3B-205ENST00000636792 MYOM2P54296 1465 aa9.77□□□□□ -0.85
UPF3B-205ENST00000636792 ARHGAP23Q9P227 1491 aa9.77□□□□□ -0.85
UPF3B-205ENST00000636792 LMTK3Q96Q04 1460 aa9.76□□□□□ -0.85
UPF3B-205ENST00000636792 RPGRIP1LQ68CZ1 1315 aa9.76□□□□□ -0.85
UPF3B-205ENST00000636792 NEXMIFQ5QGS0 1516 aa9.76□□□□□ -0.85
UPF3B-205ENST00000636792 ZFYVE9O95405 1425 aa9.75□□□□□ -0.85
UPF3B-205ENST00000636792 KIAA1210Q9ULL0 1709 aa9.75□□□□□ -0.85
UPF3B-205ENST00000636792 DIP2AQ14689 1571 aa9.75□□□□□ -0.85
UPF3B-205ENST00000636792 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
UPF3B-205ENST00000636792 GPR153Q6NV75 609 aa9.74□□□□□ -0.85
UPF3B-205ENST00000636792 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
UPF3B-205ENST00000636792 CCER1Q8TC90 406 aaPredicted RBP9.74□□□□□ -0.85
UPF3B-205ENST00000636792 CEBPAP49715 358 aaPredicted RBP9.73□□□□□ -0.85
UPF3B-205ENST00000636792 IDI1Q13907 227 aa9.73□□□□□ -0.85
UPF3B-205ENST00000636792 THEMISQ8N1K5 641 aaPredicted RBP9.73□□□□□ -0.85
UPF3B-205ENST00000636792 NRXN1Q9ULB1 1477 aa9.72□□□□□ -0.85
UPF3B-205ENST00000636792 SETBP1Q9Y6X0 1596 aa9.72□□□□□ -0.85
UPF3B-205ENST00000636792 RIOK3O14730 519 aaKnown RBP9.72□□□□□ -0.85
UPF3B-205ENST00000636792 HDGFP51858 240 aaKnown RBP9.72□□□□□ -0.85
UPF3B-205ENST00000636792 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
UPF3B-205ENST00000636792 MED14O60244 1454 aa9.72□□□□□ -0.85
UPF3B-205ENST00000636792 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.71□□□□□ -0.86
UPF3B-205ENST00000636792 TONSLQ96HA7 1378 aa9.71□□□□□ -0.86
UPF3B-205ENST00000636792 SCAF11Q99590 1463 aaKnown RBP9.71□□□□□ -0.86
UPF3B-205ENST00000636792 IQGAP1P46940 1657 aa9.71□□□□□ -0.86
UPF3B-205ENST00000636792 RIMS2Q9UQ26 1411 aa9.7□□□□□ -0.86
UPF3B-205ENST00000636792 VGFO15240 615 aaPredicted RBP9.69□□□□□ -0.86
UPF3B-205ENST00000636792 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
UPF3B-205ENST00000636792 SETD1AO15047 1707 aaKnown RBP9.68□□□□□ -0.86
UPF3B-205ENST00000636792 PIK3C2GO75747 1445 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.68□□□□□ -0.86
UPF3B-205ENST00000636792 ARSIQ5FYB1 569 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 ANKRD13DQ6ZTN6 518 aa9.68□□□□□ -0.86
UPF3B-205ENST00000636792 ZFP91Q96JP5 570 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms