RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 CREBRFQ8IUR6 639 aa17.46■□□□□ 0.39
GABRB3-219ENST00000636466 IQGAP2Q13576 1575 aa17.46■□□□□ 0.39
GABRB3-219ENST00000636466 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.46■□□□□ 0.38
GABRB3-219ENST00000636466 IFIT2P09913 472 aaKnown RBP17.46■□□□□ 0.38
GABRB3-219ENST00000636466 ESCO1Q5FWF5 840 aa17.45■□□□□ 0.38
GABRB3-219ENST00000636466 CLSTN1O94985 981 aa17.45■□□□□ 0.38
GABRB3-219ENST00000636466 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
GABRB3-219ENST00000636466 REC8O95072 547 aa17.44■□□□□ 0.38
GABRB3-219ENST00000636466 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
GABRB3-219ENST00000636466 PDZRN3Q9UPQ7 1066 aa17.44■□□□□ 0.38
GABRB3-219ENST00000636466 MAGI1Q96QZ7 1491 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-219ENST00000636466 SF3A1Q15459 793 aaKnown RBP17.44■□□□□ 0.38
GABRB3-219ENST00000636466 SUPT6HQ7KZ85 1726 aaKnown RBP17.44■□□□□ 0.38
GABRB3-219ENST00000636466 FBXO31Q5XUX0 539 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-219ENST00000636466 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
GABRB3-219ENST00000636466 SLC52A1Q9NWF4 448 aa17.44■□□□□ 0.38
GABRB3-219ENST00000636466 NCOA1Q15788 1441 aa17.43■□□□□ 0.38
GABRB3-219ENST00000636466 RBM33Q96EV2 1170 aaKnown RBP17.43■□□□□ 0.38
GABRB3-219ENST00000636466 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
GABRB3-219ENST00000636466 HTATSF1O43719 755 aaKnown RBP17.43■□□□□ 0.38
GABRB3-219ENST00000636466 PTMSP20962 102 aa17.43■□□□□ 0.38
GABRB3-219ENST00000636466 MCTP1Q6DN14 999 aa17.43■□□□□ 0.38
GABRB3-219ENST00000636466 TWISTNBQ3B726 338 aaPredicted RBP17.42■□□□□ 0.38
GABRB3-219ENST00000636466 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
GABRB3-219ENST00000636466 PTPRKQ15262 1439 aa17.42■□□□□ 0.38
GABRB3-219ENST00000636466 DDX11L8A8MPP1 907 aa17.42■□□□□ 0.38
GABRB3-219ENST00000636466 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
GABRB3-219ENST00000636466 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
GABRB3-219ENST00000636466 H3BQV1 296 aa17.41■□□□□ 0.38
GABRB3-219ENST00000636466 IFFO2Q5TF58 517 aa17.41■□□□□ 0.38
GABRB3-219ENST00000636466 FAM184AQ8NB25 1140 aa17.41■□□□□ 0.38
GABRB3-219ENST00000636466 ROCK1Q13464 1354 aa17.41■□□□□ 0.38
GABRB3-219ENST00000636466 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
GABRB3-219ENST00000636466 G3BP1Q13283 466 aaKnown RBP eCLIP17.4■□□□□ 0.38
GABRB3-219ENST00000636466 RASSF8Q8NHQ8 419 aa17.4■□□□□ 0.38
GABRB3-219ENST00000636466 CAMSAP2Q08AD1 1489 aa17.4■□□□□ 0.38
GABRB3-219ENST00000636466 APPP05067 770 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 FOSBP53539 338 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 CHMP5Q9NZZ3 219 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 ATF3P18847 181 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 SURF6O75683 361 aaKnown RBP17.39■□□□□ 0.37
GABRB3-219ENST00000636466 UBTFL1P0CB47 393 aaPredicted RBP17.39■□□□□ 0.37
GABRB3-219ENST00000636466 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
GABRB3-219ENST00000636466 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.37
GABRB3-219ENST00000636466 IDI1Q13907 227 aa17.38■□□□□ 0.37
GABRB3-219ENST00000636466 VPS37CA5D8V6 355 aaPredicted RBP17.38■□□□□ 0.37
GABRB3-219ENST00000636466 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
GABRB3-219ENST00000636466 SLC4A2P04920 1241 aa17.38■□□□□ 0.37
GABRB3-219ENST00000636466 LAMC3Q9Y6N6 1575 aa17.37■□□□□ 0.37
GABRB3-219ENST00000636466 PROSER2Q86WR7 435 aaPredicted RBP17.36■□□□□ 0.37
GABRB3-219ENST00000636466 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
GABRB3-219ENST00000636466 PTPN23Q9H3S7 1636 aa17.36■□□□□ 0.37
GABRB3-219ENST00000636466 FBLN1P23142 703 aa17.36■□□□□ 0.37
GABRB3-219ENST00000636466 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
GABRB3-219ENST00000636466 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
GABRB3-219ENST00000636466 PLEKHH2Q8IVE3 1493 aa17.36■□□□□ 0.37
GABRB3-219ENST00000636466 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 G3V3G9 751 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 RUFY2Q8WXA3 655 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
GABRB3-219ENST00000636466 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
GABRB3-219ENST00000636466 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
GABRB3-219ENST00000636466 MSH5O43196 834 aa17.33■□□□□ 0.37
GABRB3-219ENST00000636466 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.37
GABRB3-219ENST00000636466 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.36
GABRB3-219ENST00000636466 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.36
GABRB3-219ENST00000636466 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
GABRB3-219ENST00000636466 CSPP1Q1MSJ5 1256 aa17.32■□□□□ 0.36
GABRB3-219ENST00000636466 TMX4Q9H1E5 349 aaPredicted RBP17.32■□□□□ 0.36
GABRB3-219ENST00000636466 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
GABRB3-219ENST00000636466 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 RTEL1-TNFRSF6BF6WH68 1400 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 CD109Q6YHK3 1445 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 CDC45O75419 566 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 THEMISQ8N1K5 641 aaPredicted RBP17.31■□□□□ 0.36
GABRB3-219ENST00000636466 NUDT16Q96DE0 195 aaKnown RBP17.31■□□□□ 0.36
GABRB3-219ENST00000636466 CCDC61Q9Y6R9 512 aa17.31■□□□□ 0.36
GABRB3-219ENST00000636466 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
GABRB3-219ENST00000636466 NEK4P51957 841 aa17.3■□□□□ 0.36
GABRB3-219ENST00000636466 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
GABRB3-219ENST00000636466 KDM4AO75164 1064 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 NME9Q86XW9 330 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 PES1O00541 588 aaKnown RBP17.29■□□□□ 0.36
GABRB3-219ENST00000636466 PHF14O94880 888 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 TMPOP42166 694 aaKnown RBP17.29■□□□□ 0.36
GABRB3-219ENST00000636466 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 ATP6V1DQ9Y5K8 247 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 CPLX1O14810 134 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
GABRB3-219ENST00000636466 RAD21O60216 631 aa17.28■□□□□ 0.36
GABRB3-219ENST00000636466 CLASRPQ8N2M8 674 aaKnown RBP17.28■□□□□ 0.36
GABRB3-219ENST00000636466 SMC3Q9UQE7 1217 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms