RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
SMARCA2-250ENST00000636367 CERKQ8TCT0 537 aa11.28□□□□□ -0.6
SMARCA2-250ENST00000636367 SLAIN2Q9P270 581 aa11.28□□□□□ -0.6
SMARCA2-250ENST00000636367 FAM198AQ9UFP1 575 aa11.28□□□□□ -0.6
SMARCA2-250ENST00000636367 GUCA2AQ02747 115 aa11.27□□□□□ -0.6
SMARCA2-250ENST00000636367 ATP9BO43861 1147 aa11.27□□□□□ -0.61
SMARCA2-250ENST00000636367 SEMA3FQ13275 785 aa11.27□□□□□ -0.61
SMARCA2-250ENST00000636367 KANK4Q5T7N3 995 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-250ENST00000636367 HLA-CQ95604 372 aa11.27□□□□□ -0.61
SMARCA2-250ENST00000636367 RBM27Q9P2N5 1060 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-250ENST00000636367 CDCA7LQ96GN5 454 aa11.26□□□□□ -0.61
SMARCA2-250ENST00000636367 JPH4Q96JJ6 628 aa11.26□□□□□ -0.61
SMARCA2-250ENST00000636367 SERPINB4P48594 390 aa11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 PRSS12P56730 875 aa11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 PCDHGC3Q9UN70 934 aa11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 C3orf80F5H4A9 247 aa11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 NOVA2Q9UNW9 492 aaKnown RBP11.25□□□□□ -0.61
SMARCA2-250ENST00000636367 PIK3CDO00329 1044 aa11.24□□□□□ -0.61
SMARCA2-250ENST00000636367 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
SMARCA2-250ENST00000636367 SCNN1AP37088 669 aa11.23□□□□□ -0.61
SMARCA2-250ENST00000636367 EYA1Q99502 592 aa11.23□□□□□ -0.61
SMARCA2-250ENST00000636367 SOWAHDA6NJG2 315 aa11.23□□□□□ -0.61
SMARCA2-250ENST00000636367 SMARCA5O60264 1052 aaPredicted RBP11.23□□□□□ -0.61
SMARCA2-250ENST00000636367 SLC34A2O95436 690 aa11.23□□□□□ -0.61
SMARCA2-250ENST00000636367 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
SMARCA2-250ENST00000636367 ATAD2BQ9ULI0 1458 aa11.22□□□□□ -0.61
SMARCA2-250ENST00000636367 FDX1P10109 184 aa11.21□□□□□ -0.61
SMARCA2-250ENST00000636367 ERCC3P19447 782 aa11.21□□□□□ -0.61
SMARCA2-250ENST00000636367 ELOAQ14241 798 aaKnown RBP11.21□□□□□ -0.61
SMARCA2-250ENST00000636367 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
SMARCA2-250ENST00000636367 HOXA2O43364 376 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 KDM4AO75164 1064 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 PLCG2P16885 1265 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 SSFA2P28290 1259 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 SOX11P35716 441 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 FOSBP53539 338 aa11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 MARSP56192 900 aaKnown RBP11.21□□□□□ -0.62
SMARCA2-250ENST00000636367 DRC1Q96MC2 740 aa11.2□□□□□ -0.62
SMARCA2-250ENST00000636367 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 CHRDL2Q6WN34 429 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 SREK1Q8WXA9 508 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 TAGLNQ01995 201 aaKnown RBP11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 NR6A1Q15406 480 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 NPAS4Q8IUM7 802 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 ADAM33Q9BZ11 813 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 SMARCA2P51531 1590 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 WIZO95785 1651 aa11.19□□□□□ -0.62
SMARCA2-250ENST00000636367 RSF1Q96T23 1441 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 ANKRD33BA6NCL7 494 aa11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 ZNF454Q8N9F8 522 aa11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 BIN2Q9UBW5 565 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 PPP1R1BQ9UD71 204 aaPredicted RBP11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 PCDHGA4Q9Y5G9 962 aa11.18□□□□□ -0.62
SMARCA2-250ENST00000636367 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
SMARCA2-250ENST00000636367 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
SMARCA2-250ENST00000636367 NUDT18Q6ZVK8 323 aa11.16□□□□□ -0.62
SMARCA2-250ENST00000636367 DEPDC4Q8N2C3 294 aa11.16□□□□□ -0.62
SMARCA2-250ENST00000636367 CRTC2Q53ET0 693 aaPredicted RBP11.15□□□□□ -0.62
SMARCA2-250ENST00000636367 IER5LQ5T953 404 aa11.15□□□□□ -0.62
SMARCA2-250ENST00000636367 PEG3Q9GZU2 1588 aa11.15□□□□□ -0.62
SMARCA2-250ENST00000636367 KDM4FA0A1W2PPD8 638 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L3A6NCW0 530 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L4A6NCW7 530 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 DNAJB2P25686 324 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 MTMR2Q13614 643 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L2Q6R6M4 530 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L1Q7RTZ2 530 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 C8orf37Q96NL8 207 aa11.15□□□□□ -0.63
SMARCA2-250ENST00000636367 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
SMARCA2-250ENST00000636367 ATMINO43313 823 aaPredicted RBP11.14□□□□□ -0.63
SMARCA2-250ENST00000636367 TMEM134Q9H6X4 195 aa11.14□□□□□ -0.63
SMARCA2-250ENST00000636367 TSKSQ9UJT2 592 aa11.14□□□□□ -0.63
SMARCA2-250ENST00000636367 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L21D6R901 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L17D6RBQ6 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L19D6RCP7 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L20D6RJB6 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 MYT1Q01538 1121 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L24Q0WX57 530 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 SPATA32Q96LK8 384 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 FAM69CQ0P6D2 419 aa11.12□□□□□ -0.63
SMARCA2-250ENST00000636367 HMGXB3Q12766 1538 aa11.11□□□□□ -0.63
SMARCA2-250ENST00000636367 RECKO95980 971 aa11.11□□□□□ -0.63
SMARCA2-250ENST00000636367 COL9A1P20849 921 aa11.11□□□□□ -0.63
SMARCA2-250ENST00000636367 EIF4G2P78344 907 aaKnown RBP eCLIP11.11□□□□□ -0.63
SMARCA2-250ENST00000636367 PER1O15534 1290 aaPredicted RBP11.1□□□□□ -0.63
SMARCA2-250ENST00000636367 USP17L5A8MUK1 530 aa11.1□□□□□ -0.63
SMARCA2-250ENST00000636367 SKIP12755 728 aa11.1□□□□□ -0.63
SMARCA2-250ENST00000636367 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
SMARCA2-250ENST00000636367 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms