RNA–Protein interactions for RNA: ENST00000635990.2

TCF4-277, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 7,396 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-277ENST00000635990 CEP89Q96ST8 783 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 PPP6R1Q9UPN7 881 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 CENPJQ9HC77 1338 aaPredicted RBP7.83□□□□□ -1.16
TCF4-277ENST00000635990 ERICH2A1L162 156 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 PTCD1O75127 700 aaKnown RBP7.83□□□□□ -1.16
TCF4-277ENST00000635990 TPD52L1Q16890 204 aaPredicted RBP7.83□□□□□ -1.16
TCF4-277ENST00000635990 TOM1O60784 492 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 NLRP13Q86W25 1043 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 PLEKHO1Q53GL0 409 aaPredicted RBP7.83□□□□□ -1.16
TCF4-277ENST00000635990 WDR70Q9NW82 654 aa7.83□□□□□ -1.16
TCF4-277ENST00000635990 FOXO3O43524 673 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 FAM184AQ8NB25 1140 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 NRDCO43847 1150 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 RRP12Q5JTH9 1297 aaKnown RBP7.82□□□□□ -1.16
TCF4-277ENST00000635990 WDR78Q5VTH9 848 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 ACSBG1Q96GR2 724 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 CFAP70Q5T0N1 1121 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
TCF4-277ENST00000635990 MIA2Q96PC5 1412 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 RRS1Q15050 365 aaKnown RBP7.81□□□□□ -1.16
TCF4-277ENST00000635990 SPG7Q9UQ90 795 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 CD109Q6YHK3 1445 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 ZNF622Q969S3 477 aaKnown RBP eCLIP7.81□□□□□ -1.16
TCF4-277ENST00000635990 KIF16BQ96L93 1317 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 DIAPH3Q9NSV4 1193 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 TRDNQ13061 729 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 SETD1BQ9UPS6 1966 aaKnown RBP7.81□□□□□ -1.16
TCF4-277ENST00000635990 MPHOSPH10O00566 681 aaKnown RBP7.81□□□□□ -1.16
TCF4-277ENST00000635990 WAPLQ7Z5K2 1190 aa7.81□□□□□ -1.16
TCF4-277ENST00000635990 WWC2Q6AWC2 1192 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 USHBP1Q8N6Y0 703 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 CABP1Q9NZU7 370 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 LRRFIP1Q32MZ4 808 aaKnown RBP7.8□□□□□ -1.16
TCF4-277ENST00000635990 R3HCC1Q9Y3T6 440 aaKnown RBP7.8□□□□□ -1.16
TCF4-277ENST00000635990 UNC13AQ9UPW8 1703 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 PAF1Q8N7H5 531 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 MPHOSPH8Q99549 860 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
TCF4-277ENST00000635990 SIL1Q9H173 461 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 DNAJC2Q99543 621 aaKnown RBP7.8□□□□□ -1.16
TCF4-277ENST00000635990 ANKIB1Q9P2G1 1089 aa7.8□□□□□ -1.16
TCF4-277ENST00000635990 TRIM29Q14134 588 aa7.79□□□□□ -1.16
TCF4-277ENST00000635990 LMTK3Q96Q04 1460 aa7.79□□□□□ -1.16
TCF4-277ENST00000635990 SLKQ9H2G2 1235 aaPredicted RBP7.79□□□□□ -1.16
TCF4-277ENST00000635990 ANO2Q9NQ90 1003 aa7.79□□□□□ -1.16
TCF4-277ENST00000635990 A0A0U1RQG5 324 aaPredicted RBP7.79□□□□□ -1.16
TCF4-277ENST00000635990 APAF1O14727 1248 aa7.79□□□□□ -1.16
TCF4-277ENST00000635990 FBXO31Q5XUX0 539 aaPredicted RBP7.79□□□□□ -1.16
TCF4-277ENST00000635990 AK7Q96M32 723 aa7.79□□□□□ -1.16
TCF4-277ENST00000635990 ZNF530Q6P9A1 599 aaPredicted RBP7.78□□□□□ -1.16
TCF4-277ENST00000635990 PCMTD1Q96MG8 357 aaPredicted RBP7.78□□□□□ -1.16
TCF4-277ENST00000635990 TTC39AQ5SRH9 613 aa7.78□□□□□ -1.16
TCF4-277ENST00000635990 TMOD3Q9NYL9 352 aa7.78□□□□□ -1.16
TCF4-277ENST00000635990 BTBD11A6QL63 1104 aa7.78□□□□□ -1.16
TCF4-277ENST00000635990 SULT6B1Q6IMI4 303 aa7.78□□□□□ -1.16
TCF4-277ENST00000635990 NCKAP5LQ9HCH0 1330 aa7.78□□□□□ -1.16
TCF4-277ENST00000635990 PPM1FP49593 454 aaPredicted RBP7.77□□□□□ -1.16
TCF4-277ENST00000635990 CCDC34Q96HJ3 373 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 FAM161AQ3B820 660 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 HTATSF1O43719 755 aaKnown RBP7.77□□□□□ -1.17
TCF4-277ENST00000635990 CHRNA2Q15822 529 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 USP47Q96K76 1375 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 PLCD3Q8N3E9 789 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
TCF4-277ENST00000635990 CPLX1O14810 134 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 TPM4P67936 248 aa7.77□□□□□ -1.17
TCF4-277ENST00000635990 CA8P35219 290 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.76□□□□□ -1.17
TCF4-277ENST00000635990 RTEL1-TNFRSF6BF6WH68 1400 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 IGF1RP08069 1367 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 EXOC5O00471 708 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 WDHD1O75717 1129 aaPredicted RBP7.76□□□□□ -1.17
TCF4-277ENST00000635990 MYOM3Q5VTT5 1437 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 TMEM87AQ8NBN3 555 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 PIBF1Q8WXW3 757 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 RFC4P35249 363 aa7.76□□□□□ -1.17
TCF4-277ENST00000635990 TOPBP1Q92547 1522 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 KRT28Q7Z3Y7 464 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 AMOTL2Q9Y2J4 779 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 UBTFL1P0CB47 393 aaPredicted RBP7.75□□□□□ -1.17
TCF4-277ENST00000635990 SLC4A8Q2Y0W8 1093 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 GNL3LQ9NVN8 582 aaKnown RBP7.75□□□□□ -1.17
TCF4-277ENST00000635990 TBC1D2BQ9UPU7 963 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 ERBINQ96RT1 1412 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 STARD3NLO95772 234 aa7.75□□□□□ -1.17
TCF4-277ENST00000635990 EPRSP07814 1512 aaKnown RBP7.74□□□□□ -1.17
TCF4-277ENST00000635990 SYNJ1O43426 1573 aa7.74□□□□□ -1.17
TCF4-277ENST00000635990 CCDC57Q2TAC2 916 aa7.74□□□□□ -1.17
TCF4-277ENST00000635990 COG6Q9Y2V7 657 aa7.74□□□□□ -1.17
TCF4-277ENST00000635990 MAP4K4O95819 1239 aaPredicted RBP7.74□□□□□ -1.17
TCF4-277ENST00000635990 FKBP4Q02790 459 aaKnown RBP eCLIP7.74□□□□□ -1.17
TCF4-277ENST00000635990 MSH6P52701 1360 aa7.74□□□□□ -1.17
TCF4-277ENST00000635990 RRBP1Q9P2E9 1410 aaKnown RBP7.74□□□□□ -1.17
TCF4-277ENST00000635990 MATR3P43243 847 aaKnown RBP eCLIP7.73□□□□□ -1.17
TCF4-277ENST00000635990 SLC12A5Q9H2X9 1139 aa7.73□□□□□ -1.17
TCF4-277ENST00000635990 GAS2L2Q8NHY3 880 aa7.73□□□□□ -1.17
TCF4-277ENST00000635990 PKNOX2Q96KN3 472 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms