RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ROCK2O75116 1388 aaKnown RBP21.46■■□□□ 1.03
CLN8-209ENST00000635970 C14orf37Q86TY3 774 aa21.46■■□□□ 1.03
CLN8-209ENST00000635970 MSH6P52701 1360 aa21.44■■□□□ 1.02
CLN8-209ENST00000635970 ADGRL3Q9HAR2 1447 aa21.44■■□□□ 1.02
CLN8-209ENST00000635970 NCOA3Q9Y6Q9 1424 aa21.44■■□□□ 1.02
CLN8-209ENST00000635970 CCER2I3L3R5 266 aa21.44■■□□□ 1.02
CLN8-209ENST00000635970 FAM135BQ49AJ0 1406 aa21.43■■□□□ 1.02
CLN8-209ENST00000635970 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
CLN8-209ENST00000635970 PRAM1Q96QH2 718 aa21.42■■□□□ 1.02
CLN8-209ENST00000635970 UBAP1LF5GYI3 381 aa21.41■■□□□ 1.02
CLN8-209ENST00000635970 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
CLN8-209ENST00000635970 ANP32EQ9BTT0 268 aa21.39■■□□□ 1.01
CLN8-209ENST00000635970 C19orf44Q9H6X5 657 aa21.39■■□□□ 1.01
CLN8-209ENST00000635970 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
CLN8-209ENST00000635970 CDC42BPGQ6DT37 1551 aa21.38■■□□□ 1.01
CLN8-209ENST00000635970 POGKQ9P215 609 aa21.37■■□□□ 1.01
CLN8-209ENST00000635970 SIRT1Q96EB6 747 aa21.37■■□□□ 1.01
CLN8-209ENST00000635970 DCCP43146 1447 aa21.37■■□□□ 1.01
CLN8-209ENST00000635970 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
CLN8-209ENST00000635970 TOM1O60784 492 aa21.35■■□□□ 1.01
CLN8-209ENST00000635970 PIP4K2BP78356 416 aa21.35■■□□□ 1.01
CLN8-209ENST00000635970 ADGRB2O60241 1585 aa21.35■■□□□ 1.01
CLN8-209ENST00000635970 FBXO41Q8TF61 875 aa21.34■■□□□ 1.01
CLN8-209ENST00000635970 FMN2Q9NZ56 1722 aa21.34■■□□□ 1.01
CLN8-209ENST00000635970 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
CLN8-209ENST00000635970 ATF3P18847 181 aa21.34■■□□□ 1.01
CLN8-209ENST00000635970 DDX10Q13206 875 aaKnown RBP21.34■■□□□ 1.01
CLN8-209ENST00000635970 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
CLN8-209ENST00000635970 MINK1Q8N4C8 1332 aaPredicted RBP21.33■■□□□ 1
CLN8-209ENST00000635970 MST1RQ04912 1400 aa21.33■■□□□ 1
CLN8-209ENST00000635970 CADPS2Q86UW7 1296 aa21.32■■□□□ 1
CLN8-209ENST00000635970 RGPD8O14715 1765 aaPredicted RBP21.32■■□□□ 1
CLN8-209ENST00000635970 NEFLP07196 543 aa21.32■■□□□ 1
CLN8-209ENST00000635970 ANP32CO43423 234 aa21.3■■□□□ 1
CLN8-209ENST00000635970 CENPJQ9HC77 1338 aaPredicted RBP21.3■■□□□ 1
CLN8-209ENST00000635970 SLAIN2Q9P270 581 aa21.29■■□□□ 1
CLN8-209ENST00000635970 EIF3AQ14152 1382 aaKnown RBP21.29■■□□□ 1
CLN8-209ENST00000635970 USP32Q8NFA0 1604 aa21.28■■□□□ 1
CLN8-209ENST00000635970 NUTM2FA1L443 756 aa21.28■■□□□ 1
CLN8-209ENST00000635970 FKBP8Q14318 412 aa21.28■■□□□ 1
CLN8-209ENST00000635970 C1orf167Q5SNV9 1468 aa21.27■■□□□ 1
CLN8-209ENST00000635970 TULP4Q9NRJ4 1543 aa21.25■□□□□ 0.99
CLN8-209ENST00000635970 ILDR1Q86SU0 546 aaPredicted RBP21.25■□□□□ 0.99
CLN8-209ENST00000635970 USP47Q96K76 1375 aa21.25■□□□□ 0.99
CLN8-209ENST00000635970 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
CLN8-209ENST00000635970 BRINP3Q76B58 766 aa21.21■□□□□ 0.99
CLN8-209ENST00000635970 ORAI2Q96SN7 254 aa21.2■□□□□ 0.98
CLN8-209ENST00000635970 NHSL1Q5SYE7 1610 aa21.2■□□□□ 0.98
CLN8-209ENST00000635970 PHLPP1O60346 1717 aa21.2■□□□□ 0.98
CLN8-209ENST00000635970 ST20-MTHFSA0A0A6YYL1 179 aa21.19■□□□□ 0.98
CLN8-209ENST00000635970 ATP7BP35670 1465 aa21.19■□□□□ 0.98
CLN8-209ENST00000635970 ITSN1Q15811 1721 aa21.19■□□□□ 0.98
CLN8-209ENST00000635970 TOPAZ1Q8N9V7 1692 aa21.18■□□□□ 0.98
CLN8-209ENST00000635970 PRR36Q9H6K5 1346 aa21.18■□□□□ 0.98
CLN8-209ENST00000635970 CDK19Q9BWU1 502 aa21.18■□□□□ 0.98
CLN8-209ENST00000635970 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
CLN8-209ENST00000635970 ESCO1Q5FWF5 840 aa21.17■□□□□ 0.98
CLN8-209ENST00000635970 KIF1AQ12756 1690 aa21.16■□□□□ 0.98
CLN8-209ENST00000635970 ANKARQ7Z5J8 1434 aa21.16■□□□□ 0.98
CLN8-209ENST00000635970 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
CLN8-209ENST00000635970 HSPA1LP34931 641 aa21.16■□□□□ 0.98
CLN8-209ENST00000635970 DDX17Q92841 729 aaKnown RBP21.16■□□□□ 0.98
CLN8-209ENST00000635970 TESK2Q96S53 571 aa21.14■□□□□ 0.98
CLN8-209ENST00000635970 CABP2Q9NPB3 220 aa21.14■□□□□ 0.98
CLN8-209ENST00000635970 COL16A1Q07092 1604 aaPredicted RBP21.14■□□□□ 0.98
CLN8-209ENST00000635970 SRPK2P78362 688 aaKnown RBP21.14■□□□□ 0.97
CLN8-209ENST00000635970 EVC2Q86UK5 1308 aa21.13■□□□□ 0.97
CLN8-209ENST00000635970 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
CLN8-209ENST00000635970 PMFBP1Q8TBY8 1022 aa21.1■□□□□ 0.97
CLN8-209ENST00000635970 HSPA5P11021 654 aaKnown RBP21.09■□□□□ 0.97
CLN8-209ENST00000635970 RBM19Q9Y4C8 960 aaKnown RBP21.09■□□□□ 0.97
CLN8-209ENST00000635970 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
CLN8-209ENST00000635970 EIF4G2P78344 907 aaKnown RBP eCLIP21.08■□□□□ 0.97
CLN8-209ENST00000635970 PHF8Q9UPP1 1060 aa21.08■□□□□ 0.97
CLN8-209ENST00000635970 FOXO3O43524 673 aa21.08■□□□□ 0.96
CLN8-209ENST00000635970 XPCQ01831 940 aaPredicted RBP21.07■□□□□ 0.96
CLN8-209ENST00000635970 ERICH6BQ5W0A0 696 aa21.07■□□□□ 0.96
CLN8-209ENST00000635970 PPIP5K1Q6PFW1 1433 aa21.07■□□□□ 0.96
CLN8-209ENST00000635970 PXDNQ92626 1479 aa21.07■□□□□ 0.96
CLN8-209ENST00000635970 CCDC61Q9Y6R9 512 aa21.05■□□□□ 0.96
CLN8-209ENST00000635970 NPHP3Q7Z494 1330 aa21.04■□□□□ 0.96
CLN8-209ENST00000635970 TRPM3Q9HCF6 1732 aaPredicted RBP21.03■□□□□ 0.96
CLN8-209ENST00000635970 ATAD2Q6PL18 1390 aa21.02■□□□□ 0.96
CLN8-209ENST00000635970 AKAP12Q02952 1782 aa21.02■□□□□ 0.95
CLN8-209ENST00000635970 SOS2Q07890 1332 aaPredicted RBP21.02■□□□□ 0.95
CLN8-209ENST00000635970 TMF1P82094 1093 aa21.01■□□□□ 0.95
CLN8-209ENST00000635970 MYOM1P52179 1685 aa21.01■□□□□ 0.95
CLN8-209ENST00000635970 SHPRHQ149N8 1683 aa21.01■□□□□ 0.95
CLN8-209ENST00000635970 CABP1Q9NZU7 370 aa21.01■□□□□ 0.95
CLN8-209ENST00000635970 NGDNQ8NEJ9 315 aaKnown RBP21■□□□□ 0.95
CLN8-209ENST00000635970 ACEP12821 1306 aa21■□□□□ 0.95
CLN8-209ENST00000635970 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
CLN8-209ENST00000635970 PLEKHG3A1L390 1219 aa20.99■□□□□ 0.95
CLN8-209ENST00000635970 KRT28Q7Z3Y7 464 aa20.98■□□□□ 0.95
CLN8-209ENST00000635970 PSME1Q06323 249 aa20.97■□□□□ 0.95
CLN8-209ENST00000635970 SLC24A1O60721 1099 aa20.97■□□□□ 0.95
CLN8-209ENST00000635970 MON2Q7Z3U7 1717 aa20.97■□□□□ 0.95
CLN8-209ENST00000635970 ALS2Q96Q42 1657 aa20.96■□□□□ 0.95
CLN8-209ENST00000635970 TMC1Q8TDI8 760 aa20.96■□□□□ 0.95
CLN8-209ENST00000635970 CD163L1Q9NR16 1453 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms