RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 STK26Q9P289 416 aa16.95■□□□□ 0.3
CACNA1A-219ENST00000635917 INSRP06213 1382 aa16.95■□□□□ 0.3
CACNA1A-219ENST00000635917 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
CACNA1A-219ENST00000635917 PRAM1Q96QH2 718 aa16.93■□□□□ 0.3
CACNA1A-219ENST00000635917 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
CACNA1A-219ENST00000635917 METP08581 1390 aa16.93■□□□□ 0.3
CACNA1A-219ENST00000635917 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
CACNA1A-219ENST00000635917 SLIT1O75093 1534 aa16.93■□□□□ 0.3
CACNA1A-219ENST00000635917 TECPR2O15040 1411 aa16.92■□□□□ 0.3
CACNA1A-219ENST00000635917 ADAMTS13Q76LX8 1427 aa16.91■□□□□ 0.3
CACNA1A-219ENST00000635917 MED14O60244 1454 aa16.91■□□□□ 0.3
CACNA1A-219ENST00000635917 ANKRD36BQ8N2N9 1353 aa16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 SAFB2Q14151 953 aaKnown RBP eCLIP16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 CPS1P31327 1500 aa16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 NSD3Q9BZ95 1437 aa16.9■□□□□ 0.3
CACNA1A-219ENST00000635917 LTKP29376 864 aa16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 CABP2Q9NPB3 220 aa16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 SUPT16HQ9Y5B9 1047 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 PLEKHG1Q9ULL1 1385 aa16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 CD163L1Q9NR16 1453 aa16.89■□□□□ 0.29
CACNA1A-219ENST00000635917 ADAMTSL3P82987 1691 aa16.88■□□□□ 0.29
CACNA1A-219ENST00000635917 PLEKHH1Q9ULM0 1364 aa16.88■□□□□ 0.29
CACNA1A-219ENST00000635917 SIRT1Q96EB6 747 aa16.87■□□□□ 0.29
CACNA1A-219ENST00000635917 FAM135BQ49AJ0 1406 aa16.87■□□□□ 0.29
CACNA1A-219ENST00000635917 ATAD2Q6PL18 1390 aa16.87■□□□□ 0.29
CACNA1A-219ENST00000635917 MINK1Q8N4C8 1332 aaPredicted RBP16.87■□□□□ 0.29
CACNA1A-219ENST00000635917 POGKQ9P215 609 aa16.86■□□□□ 0.29
CACNA1A-219ENST00000635917 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-219ENST00000635917 WAPLQ7Z5K2 1190 aa16.85■□□□□ 0.29
CACNA1A-219ENST00000635917 A0A1W2PP64 1363 aa16.84■□□□□ 0.29
CACNA1A-219ENST00000635917 SMG6Q86US8 1419 aaKnown RBP16.83■□□□□ 0.29
CACNA1A-219ENST00000635917 CDK19Q9BWU1 502 aa16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 CEP170BQ9Y4F5 1589 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 ANKRD26Q9UPS8 1709 aa16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 NSD2O96028 1365 aa16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 SRPK2P78362 688 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-219ENST00000635917 ZNF142P52746 1687 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-219ENST00000635917 TXNDC2Q86VQ3 553 aa16.81■□□□□ 0.28
CACNA1A-219ENST00000635917 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
CACNA1A-219ENST00000635917 PTPRUQ92729 1446 aa16.8■□□□□ 0.28
CACNA1A-219ENST00000635917 ADAMTS8Q9UP79 889 aa16.8■□□□□ 0.28
CACNA1A-219ENST00000635917 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
CACNA1A-219ENST00000635917 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-219ENST00000635917 ADGRB2O60241 1585 aa16.8■□□□□ 0.28
CACNA1A-219ENST00000635917 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-219ENST00000635917 ROBO2Q9HCK4 1378 aa16.79■□□□□ 0.28
CACNA1A-219ENST00000635917 THEMISQ8N1K5 641 aaPredicted RBP16.79■□□□□ 0.28
CACNA1A-219ENST00000635917 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
CACNA1A-219ENST00000635917 ATP7BP35670 1465 aa16.78■□□□□ 0.28
CACNA1A-219ENST00000635917 FKBP8Q14318 412 aa16.77■□□□□ 0.28
CACNA1A-219ENST00000635917 WASLO00401 505 aaPredicted RBP16.77■□□□□ 0.27
CACNA1A-219ENST00000635917 NUDCQ9Y266 331 aa16.77■□□□□ 0.27
CACNA1A-219ENST00000635917 EID1Q9Y6B2 187 aa16.77■□□□□ 0.27
CACNA1A-219ENST00000635917 KIF20BQ96Q89 1820 aa16.76■□□□□ 0.27
CACNA1A-219ENST00000635917 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
CACNA1A-219ENST00000635917 SENP3-EIF4A1A0A087X0R7 540 aa16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 MORC1Q86VD1 984 aa16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 TERF2IPQ9NYB0 399 aa16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 CPSF1Q10570 1443 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 XRN1Q8IZH2 1706 aaKnown RBP16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 CABP1Q9NZU7 370 aa16.75■□□□□ 0.27
CACNA1A-219ENST00000635917 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
CACNA1A-219ENST00000635917 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
CACNA1A-219ENST00000635917 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
CACNA1A-219ENST00000635917 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
CACNA1A-219ENST00000635917 PTCH1Q13635 1447 aa16.73■□□□□ 0.27
CACNA1A-219ENST00000635917 FYB1O15117 783 aa16.73■□□□□ 0.27
CACNA1A-219ENST00000635917 TOPAZ1Q8N9V7 1692 aa16.72■□□□□ 0.27
CACNA1A-219ENST00000635917 PDE3BQ13370 1112 aa16.72■□□□□ 0.27
CACNA1A-219ENST00000635917 BCANQ96GW7 911 aa16.72■□□□□ 0.27
CACNA1A-219ENST00000635917 CDC42BPGQ6DT37 1551 aa16.72■□□□□ 0.27
CACNA1A-219ENST00000635917 ZBTB22O15209 634 aa16.71■□□□□ 0.27
CACNA1A-219ENST00000635917 NEFLP07196 543 aa16.71■□□□□ 0.27
CACNA1A-219ENST00000635917 WDR43Q15061 677 aaKnown RBP eCLIP16.71■□□□□ 0.27
CACNA1A-219ENST00000635917 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
CACNA1A-219ENST00000635917 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
CACNA1A-219ENST00000635917 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
CACNA1A-219ENST00000635917 HDGFL2Q7Z4V5 671 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-219ENST00000635917 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 MTHFSP49914 203 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 NUDT16Q96DE0 195 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 CHD2O14647 1828 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 GGNBP2Q9H3C7 697 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 AMOTL2Q9Y2J4 779 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
CACNA1A-219ENST00000635917 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-219ENST00000635917 EDC4Q6P2E9 1401 aaKnown RBP16.67■□□□□ 0.26
CACNA1A-219ENST00000635917 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-219ENST00000635917 CNKSR2Q8WXI2 1034 aa16.66■□□□□ 0.26
CACNA1A-219ENST00000635917 SALL2Q9Y467 1007 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-219ENST00000635917 NCKAP5LQ9HCH0 1330 aa16.66■□□□□ 0.26
CACNA1A-219ENST00000635917 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
CACNA1A-219ENST00000635917 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
CACNA1A-219ENST00000635917 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-219ENST00000635917 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms