RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 DDX17Q92841 729 aaKnown RBP12.09□□□□□ -0.47
CDKL5-209ENST00000635828 PTCH1Q13635 1447 aa12.09□□□□□ -0.47
CDKL5-209ENST00000635828 NKTRP30414 1462 aaKnown RBP12.08□□□□□ -0.48
CDKL5-209ENST00000635828 TESK2Q96S53 571 aa12.08□□□□□ -0.48
CDKL5-209ENST00000635828 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
CDKL5-209ENST00000635828 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
CDKL5-209ENST00000635828 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
CDKL5-209ENST00000635828 DISP3Q9P2K9 1392 aa12.06□□□□□ -0.48
CDKL5-209ENST00000635828 ORAI2Q96SN7 254 aa12.06□□□□□ -0.48
CDKL5-209ENST00000635828 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
CDKL5-209ENST00000635828 DLC1Q96QB1 1528 aa12.05□□□□□ -0.48
CDKL5-209ENST00000635828 PRR36Q9H6K5 1346 aa12.05□□□□□ -0.48
CDKL5-209ENST00000635828 FAM135BQ49AJ0 1406 aa12.05□□□□□ -0.48
CDKL5-209ENST00000635828 SCAF1Q9H7N4 1312 aaKnown RBP12.04□□□□□ -0.48
CDKL5-209ENST00000635828 ADGRL3Q9HAR2 1447 aa12.04□□□□□ -0.48
CDKL5-209ENST00000635828 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
CDKL5-209ENST00000635828 C19orf44Q9H6X5 657 aa12.04□□□□□ -0.48
CDKL5-209ENST00000635828 CDK19Q9BWU1 502 aa12.04□□□□□ -0.48
CDKL5-209ENST00000635828 UBAP1LF5GYI3 381 aa12.03□□□□□ -0.48
CDKL5-209ENST00000635828 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
CDKL5-209ENST00000635828 XPCQ01831 940 aaPredicted RBP12.03□□□□□ -0.48
CDKL5-209ENST00000635828 PMFBP1Q8TBY8 1022 aa12.03□□□□□ -0.48
CDKL5-209ENST00000635828 MSH6P52701 1360 aa12.02□□□□□ -0.48
CDKL5-209ENST00000635828 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.49
CDKL5-209ENST00000635828 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.49
CDKL5-209ENST00000635828 SLAIN2Q9P270 581 aa12.01□□□□□ -0.49
CDKL5-209ENST00000635828 MST1RQ04912 1400 aa12.01□□□□□ -0.49
CDKL5-209ENST00000635828 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
CDKL5-209ENST00000635828 ATF3P18847 181 aa12□□□□□ -0.49
CDKL5-209ENST00000635828 FMN2Q9NZ56 1722 aa12□□□□□ -0.49
CDKL5-209ENST00000635828 SIRT1Q96EB6 747 aa12□□□□□ -0.49
CDKL5-209ENST00000635828 ESCO1Q5FWF5 840 aa12□□□□□ -0.49
CDKL5-209ENST00000635828 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
CDKL5-209ENST00000635828 ROBO1Q9Y6N7 1651 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 C1orf167Q5SNV9 1468 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
CDKL5-209ENST00000635828 BRINP3Q76B58 766 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 ADGRB2O60241 1585 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 CDC42BPGQ6DT37 1551 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 ATP7BP35670 1465 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 FOXO3O43524 673 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
CDKL5-209ENST00000635828 SLC12A5Q9H2X9 1139 aa11.98□□□□□ -0.49
CDKL5-209ENST00000635828 CABP1Q9NZU7 370 aa11.97□□□□□ -0.49
CDKL5-209ENST00000635828 CADPS2Q86UW7 1296 aa11.97□□□□□ -0.49
CDKL5-209ENST00000635828 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
CDKL5-209ENST00000635828 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.5
CDKL5-209ENST00000635828 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
CDKL5-209ENST00000635828 KIF7Q2M1P5 1343 aa11.95□□□□□ -0.5
CDKL5-209ENST00000635828 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
CDKL5-209ENST00000635828 NCOA3Q9Y6Q9 1424 aa11.94□□□□□ -0.5
CDKL5-209ENST00000635828 TOM1O60784 492 aa11.94□□□□□ -0.5
CDKL5-209ENST00000635828 PPIP5K1Q6PFW1 1433 aa11.94□□□□□ -0.5
CDKL5-209ENST00000635828 MYOM1P52179 1685 aa11.94□□□□□ -0.5
CDKL5-209ENST00000635828 CNGB1Q14028 1251 aaPredicted RBP11.93□□□□□ -0.5
CDKL5-209ENST00000635828 TOPAZ1Q8N9V7 1692 aa11.93□□□□□ -0.5
CDKL5-209ENST00000635828 DCCP43146 1447 aa11.93□□□□□ -0.5
CDKL5-209ENST00000635828 TMF1P82094 1093 aa11.93□□□□□ -0.5
CDKL5-209ENST00000635828 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
CDKL5-209ENST00000635828 CD163L1Q9NR16 1453 aa11.92□□□□□ -0.5
CDKL5-209ENST00000635828 HSPA1LP34931 641 aa11.92□□□□□ -0.5
CDKL5-209ENST00000635828 ACEP12821 1306 aa11.92□□□□□ -0.5
CDKL5-209ENST00000635828 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
CDKL5-209ENST00000635828 PHF8Q9UPP1 1060 aa11.91□□□□□ -0.5
CDKL5-209ENST00000635828 CCDC61Q9Y6R9 512 aa11.91□□□□□ -0.5
CDKL5-209ENST00000635828 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
CDKL5-209ENST00000635828 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
CDKL5-209ENST00000635828 CARD14Q9BXL6 1004 aa11.89□□□□□ -0.51
CDKL5-209ENST00000635828 NGDNQ8NEJ9 315 aaKnown RBP11.89□□□□□ -0.51
CDKL5-209ENST00000635828 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
CDKL5-209ENST00000635828 A0A1W2PP64 1363 aa11.88□□□□□ -0.51
CDKL5-209ENST00000635828 FBLN1P23142 703 aa11.88□□□□□ -0.51
CDKL5-209ENST00000635828 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.88□□□□□ -0.513e-7■■■■□ 24.6
CDKL5-209ENST00000635828 CCDC7Q96M83 1385 aa11.88□□□□□ -0.51
CDKL5-209ENST00000635828 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
CDKL5-209ENST00000635828 CABLES1Q8TDN4 633 aa11.88□□□□□ -0.51
CDKL5-209ENST00000635828 PHLPP1O60346 1717 aa11.88□□□□□ -0.51
CDKL5-209ENST00000635828 LMOD2Q6P5Q4 547 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 NHSL1Q5SYE7 1610 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 ITSN1Q15811 1721 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 ANKARQ7Z5J8 1434 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 PSME1Q06323 249 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 PXDNQ92626 1479 aa11.87□□□□□ -0.51
CDKL5-209ENST00000635828 KRT28Q7Z3Y7 464 aa11.86□□□□□ -0.51
CDKL5-209ENST00000635828 FBXO41Q8TF61 875 aa11.86□□□□□ -0.51
CDKL5-209ENST00000635828 PANK3Q9H999 370 aa11.86□□□□□ -0.51
CDKL5-209ENST00000635828 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
CDKL5-209ENST00000635828 EP400Q96L91 3159 aa11.86□□□□□ -0.51
CDKL5-209ENST00000635828 COL16A1Q07092 1604 aaPredicted RBP11.86□□□□□ -0.51
CDKL5-209ENST00000635828 PLEKHG3A1L390 1219 aa11.85□□□□□ -0.51
CDKL5-209ENST00000635828 AKAP12Q02952 1782 aa11.85□□□□□ -0.51
CDKL5-209ENST00000635828 POLR3AO14802 1390 aaPredicted RBP11.84□□□□□ -0.51
CDKL5-209ENST00000635828 ATAD2Q6PL18 1390 aa11.84□□□□□ -0.51
CDKL5-209ENST00000635828 SOX12O15370 315 aa11.84□□□□□ -0.51
CDKL5-209ENST00000635828 CPSF1Q10570 1443 aaKnown RBP11.84□□□□□ -0.51
CDKL5-209ENST00000635828 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
CDKL5-209ENST00000635828 NME9Q86XW9 330 aa11.84□□□□□ -0.51
CDKL5-209ENST00000635828 KTN1Q86UP2 1357 aaKnown RBP11.84□□□□□ -0.51
CDKL5-209ENST00000635828 SOS2Q07890 1332 aaPredicted RBP11.83□□□□□ -0.52
CDKL5-209ENST00000635828 USP6P35125 1406 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms