RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 NECTIN2Q92692 538 aa13.98□□□□□ -0.17
TCF4-276ENST00000635822 ZNF330Q9Y3S2 320 aaPredicted RBP13.98□□□□□ -0.17
TCF4-276ENST00000635822 ANKRD30AQ9BXX3 1397 aa13.98□□□□□ -0.17
TCF4-276ENST00000635822 RIPK4P57078 832 aa13.98□□□□□ -0.17
TCF4-276ENST00000635822 CEBPZQ03701 1054 aaKnown RBP13.98□□□□□ -0.17
TCF4-276ENST00000635822 KANK1Q14678 1352 aa13.98□□□□□ -0.17
TCF4-276ENST00000635822 XRCC6P12956 609 aaKnown RBP eCLIP13.98□□□□□ -0.17
TCF4-276ENST00000635822 NAT10Q9H0A0 1025 aaKnown RBP13.98□□□□□ -0.17
TCF4-276ENST00000635822 RABEP1Q15276 862 aa13.97□□□□□ -0.17
TCF4-276ENST00000635822 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.97□□□□□ -0.17
TCF4-276ENST00000635822 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
TCF4-276ENST00000635822 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
TCF4-276ENST00000635822 IBSPP21815 317 aaPredicted RBP13.97□□□□□ -0.17
TCF4-276ENST00000635822 RUFY2Q8WXA3 655 aa13.97□□□□□ -0.17
TCF4-276ENST00000635822 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
TCF4-276ENST00000635822 CAGE1Q8TC20 777 aa13.97□□□□□ -0.17
TCF4-276ENST00000635822 IGSF3O75054 1194 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 CCDC192P0DO97 292 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
TCF4-276ENST00000635822 TBC1D2Q9BYX2 928 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 CALCOCO1Q9P1Z2 691 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 NAP1L1P55209 391 aaKnown RBP13.96□□□□□ -0.17
TCF4-276ENST00000635822 LMOD3Q0VAK6 560 aa13.96□□□□□ -0.17
TCF4-276ENST00000635822 DYNC1I1O14576 645 aa13.96□□□□□ -0.18
TCF4-276ENST00000635822 CENPHQ9H3R5 247 aa13.96□□□□□ -0.18
TCF4-276ENST00000635822 CCDC191Q8NCU4 936 aa13.95□□□□□ -0.18
TCF4-276ENST00000635822 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
TCF4-276ENST00000635822 IPO4Q8TEX9 1081 aaKnown RBP13.95□□□□□ -0.18
TCF4-276ENST00000635822 ERCC4Q92889 916 aaPredicted RBP13.95□□□□□ -0.18
TCF4-276ENST00000635822 CWC22Q9HCG8 908 aaKnown RBP13.95□□□□□ -0.18
TCF4-276ENST00000635822 HNRNPMP52272 730 aaKnown RBP eCLIP13.94□□□□□ -0.187e-6■■■□□ 17
TCF4-276ENST00000635822 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.94□□□□□ -0.18
TCF4-276ENST00000635822 GTF2F1P35269 517 aaKnown RBP eCLIP13.94□□□□□ -0.18
TCF4-276ENST00000635822 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
TCF4-276ENST00000635822 FILIP1Q7Z7B0 1213 aa13.94□□□□□ -0.18
TCF4-276ENST00000635822 TNPO1Q92973 898 aaKnown RBP13.93□□□□□ -0.18
TCF4-276ENST00000635822 TNMDQ9H2S6 317 aa13.93□□□□□ -0.18
TCF4-276ENST00000635822 RRAGDQ9NQL2 400 aaPredicted RBP13.93□□□□□ -0.18
TCF4-276ENST00000635822 TERF2IPQ9NYB0 399 aa13.93□□□□□ -0.18
TCF4-276ENST00000635822 KIAA0754O94854 1291 aa13.93□□□□□ -0.18
TCF4-276ENST00000635822 PDE3AQ14432 1141 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
TCF4-276ENST00000635822 FAM193AP78312 1265 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 AAMPQ13685 434 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 ANKRD20A12PQ8NF67 263 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
TCF4-276ENST00000635822 TNNT1P13805 278 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 CPLX1O14810 134 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 CDR1P51861 262 aa13.92□□□□□ -0.18
TCF4-276ENST00000635822 GGT6Q6P531 493 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 SSFA2P28290 1259 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 OLFM4Q6UX06 510 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 C16orf45Q96MC5 204 aaPredicted RBP13.91□□□□□ -0.18
TCF4-276ENST00000635822 KDM4AO75164 1064 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 CCDC102AQ96A19 550 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 HOOK1Q9UJC3 728 aaKnown RBP13.91□□□□□ -0.18
TCF4-276ENST00000635822 TIGD1Q96MW7 591 aa13.91□□□□□ -0.18
TCF4-276ENST00000635822 BRPF1P55201 1214 aaPredicted RBP13.9□□□□□ -0.18
TCF4-276ENST00000635822 TRIM29Q14134 588 aa13.9□□□□□ -0.18
TCF4-276ENST00000635822 RNF20Q5VTR2 975 aa13.9□□□□□ -0.18
TCF4-276ENST00000635822 API5Q9BZZ5 524 aaKnown RBP13.9□□□□□ -0.18
TCF4-276ENST00000635822 CCDC144AA2RUR9 1427 aa13.9□□□□□ -0.18
TCF4-276ENST00000635822 SYNE3Q6ZMZ3 975 aa13.9□□□□□ -0.18
TCF4-276ENST00000635822 USP25Q9UHP3 1055 aa13.9□□□□□ -0.18
TCF4-276ENST00000635822 IFIT2P09913 472 aaKnown RBP13.9□□□□□ -0.19
TCF4-276ENST00000635822 ZNF830Q96NB3 372 aaPredicted RBP13.89□□□□□ -0.19
TCF4-276ENST00000635822 UBXN4Q92575 508 aa13.89□□□□□ -0.19
TCF4-276ENST00000635822 NOB1Q9ULX3 412 aaKnown RBP13.89□□□□□ -0.19
TCF4-276ENST00000635822 TMCO3Q6UWJ1 677 aa13.89□□□□□ -0.19
TCF4-276ENST00000635822 MCM2P49736 904 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
TCF4-276ENST00000635822 RBM27Q9P2N5 1060 aaKnown RBP13.88□□□□□ -0.19
TCF4-276ENST00000635822 CAMK4Q16566 473 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 GIMAP7Q8NHV1 300 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 UACAQ9BZF9 1416 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 VGLL3A8MV65 326 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 CCP110O43303 1012 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 EIF3JO75822 258 aaKnown RBP13.88□□□□□ -0.19
TCF4-276ENST00000635822 PTPN14Q15678 1187 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 AKAP17AQ02040 695 aaKnown RBP13.88□□□□□ -0.19
TCF4-276ENST00000635822 DCTN1Q14203 1278 aa13.88□□□□□ -0.19
TCF4-276ENST00000635822 SERPINC1P01008 464 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 WDR33Q9C0J8 1336 aaKnown RBP13.87□□□□□ -0.19
TCF4-276ENST00000635822 USP8P40818 1118 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 TCP11L2Q8N4U5 519 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 FAM177BA6PVY3 158 aa13.87□□□□□ -0.19
TCF4-276ENST00000635822 TSR2Q969E8 191 aaKnown RBP13.87□□□□□ -0.19
TCF4-276ENST00000635822 EIF2S2P20042 333 aaKnown RBP13.86□□□□□ -0.19
TCF4-276ENST00000635822 NOL10Q9BSC4 688 aaKnown RBP13.86□□□□□ -0.19
TCF4-276ENST00000635822 TRMT1Q9NXH9 659 aaKnown RBP13.86□□□□□ -0.19
TCF4-276ENST00000635822 IRX3P78415 501 aaPredicted RBP13.86□□□□□ -0.19
TCF4-276ENST00000635822 CHD1LQ86WJ1 897 aa13.86□□□□□ -0.19
TCF4-276ENST00000635822 HMOX1P09601 288 aa13.86□□□□□ -0.19
TCF4-276ENST00000635822 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
TCF4-276ENST00000635822 GTF2A1P52655 376 aaPredicted RBP13.85□□□□□ -0.19
TCF4-276ENST00000635822 CPLX2Q6PUV4 134 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms