RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 WAPLQ7Z5K2 1190 aa21.59■■□□□ 1.05
HSPG2-214ENST00000635682 PRAG1Q86YV5 1406 aa21.58■■□□□ 1.05
HSPG2-214ENST00000635682 SOS2Q07890 1332 aaPredicted RBP21.57■■□□□ 1.04
HSPG2-214ENST00000635682 NUTM2FA1L443 756 aa21.56■■□□□ 1.04
HSPG2-214ENST00000635682 ESCO1Q5FWF5 840 aa21.56■■□□□ 1.04
HSPG2-214ENST00000635682 QTRT2Q9H974 415 aaKnown RBP21.56■■□□□ 1.04
HSPG2-214ENST00000635682 UPF1Q92900 1129 aaKnown RBP eCLIP21.55■■□□□ 1.04
HSPG2-214ENST00000635682 NGLY1Q96IV0 654 aa21.55■■□□□ 1.04
HSPG2-214ENST00000635682 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
HSPG2-214ENST00000635682 LAMC1P11047 1609 aa21.54■■□□□ 1.04
HSPG2-214ENST00000635682 IFT172Q9UG01 1749 aa21.53■■□□□ 1.04
HSPG2-214ENST00000635682 LRPPRCP42704 1394 aaKnown RBP21.52■■□□□ 1.04
HSPG2-214ENST00000635682 PLEKHH1Q9ULM0 1364 aa21.52■■□□□ 1.04
HSPG2-214ENST00000635682 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-214ENST00000635682 FOXO3O43524 673 aa21.51■■□□□ 1.03
HSPG2-214ENST00000635682 RBM6P78332 1123 aaKnown RBP21.5■■□□□ 1.03
HSPG2-214ENST00000635682 ABCC11Q96J66 1382 aa21.49■■□□□ 1.03
HSPG2-214ENST00000635682 CDC42BPGQ6DT37 1551 aa21.49■■□□□ 1.03
HSPG2-214ENST00000635682 TECPR2O15040 1411 aa21.48■■□□□ 1.03
HSPG2-214ENST00000635682 PIK3C2GO75747 1445 aa21.48■■□□□ 1.03
HSPG2-214ENST00000635682 CDK12Q9NYV4 1490 aaPredicted RBP21.48■■□□□ 1.03
HSPG2-214ENST00000635682 NPHP3Q7Z494 1330 aa21.48■■□□□ 1.03
HSPG2-214ENST00000635682 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
HSPG2-214ENST00000635682 CFAP70Q5T0N1 1121 aa21.46■■□□□ 1.03
HSPG2-214ENST00000635682 C14orf93Q9H972 538 aaKnown RBP21.46■■□□□ 1.03
HSPG2-214ENST00000635682 USP21Q9UK80 565 aa21.46■■□□□ 1.03
HSPG2-214ENST00000635682 RGS12O14924 1447 aa21.45■■□□□ 1.02
HSPG2-214ENST00000635682 PXDNQ92626 1479 aa21.44■■□□□ 1.02
HSPG2-214ENST00000635682 KNDC1Q76NI1 1749 aa21.43■■□□□ 1.02
HSPG2-214ENST00000635682 SAFB2Q14151 953 aaKnown RBP eCLIP21.42■■□□□ 1.02
HSPG2-214ENST00000635682 COL22A1Q8NFW1 1626 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-214ENST00000635682 FNBP4Q8N3X1 1017 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-214ENST00000635682 TRPC5Q9UL62 973 aaPredicted RBP21.41■■□□□ 1.02
HSPG2-214ENST00000635682 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
HSPG2-214ENST00000635682 SIRT1Q96EB6 747 aa21.4■■□□□ 1.02
HSPG2-214ENST00000635682 FMN2Q9NZ56 1722 aa21.4■■□□□ 1.02
HSPG2-214ENST00000635682 MYOM2P54296 1465 aa21.39■■□□□ 1.02
HSPG2-214ENST00000635682 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.01
HSPG2-214ENST00000635682 PRAM1Q96QH2 718 aa21.38■■□□□ 1.01
HSPG2-214ENST00000635682 RGPD8O14715 1765 aaPredicted RBP21.38■■□□□ 1.01
HSPG2-214ENST00000635682 KRT28Q7Z3Y7 464 aa21.37■■□□□ 1.01
HSPG2-214ENST00000635682 DCAF11Q8TEB1 546 aa21.37■■□□□ 1.01
HSPG2-214ENST00000635682 STAC3Q96MF2 364 aa21.37■■□□□ 1.01
HSPG2-214ENST00000635682 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
HSPG2-214ENST00000635682 PCGF6Q9BYE7 350 aa21.36■■□□□ 1.01
HSPG2-214ENST00000635682 SPATA31A3Q5VYP0 1347 aa21.35■■□□□ 1.01
HSPG2-214ENST00000635682 PLEKHG5O94827 1062 aa21.35■■□□□ 1.01
HSPG2-214ENST00000635682 PHF8Q9UPP1 1060 aa21.35■■□□□ 1.01
HSPG2-214ENST00000635682 ATRNO75882 1429 aa21.35■■□□□ 1.01
HSPG2-214ENST00000635682 POGKQ9P215 609 aa21.34■■□□□ 1.01
HSPG2-214ENST00000635682 BCL9LQ86UU0 1499 aa21.33■■□□□ 1.01
HSPG2-214ENST00000635682 MARF1Q9Y4F3 1742 aaKnown RBP21.33■■□□□ 1.01
HSPG2-214ENST00000635682 KIF1AQ12756 1690 aa21.31■■□□□ 1
HSPG2-214ENST00000635682 NEUROD1Q13562 356 aa21.31■■□□□ 1
HSPG2-214ENST00000635682 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
HSPG2-214ENST00000635682 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
HSPG2-214ENST00000635682 PSME1Q06323 249 aa21.29■■□□□ 1
HSPG2-214ENST00000635682 LMOD2Q6P5Q4 547 aa21.29■■□□□ 1
HSPG2-214ENST00000635682 PMFBP1Q8TBY8 1022 aa21.29■■□□□ 1
HSPG2-214ENST00000635682 HIRIP3Q9BW71 556 aaPredicted RBP21.29■■□□□ 1
HSPG2-214ENST00000635682 ATAD2Q6PL18 1390 aa21.28■■□□□ 1
HSPG2-214ENST00000635682 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
HSPG2-214ENST00000635682 GJD4Q96KN9 370 aaPredicted RBP21.28■■□□□ 1
HSPG2-214ENST00000635682 MINK1Q8N4C8 1332 aaPredicted RBP21.27■□□□□ 0.99
HSPG2-214ENST00000635682 UNC5CLQ8IV45 518 aa21.26■□□□□ 0.99
HSPG2-214ENST00000635682 DLC1Q96QB1 1528 aa21.25■□□□□ 0.99
HSPG2-214ENST00000635682 ADGRB1O14514 1584 aa21.25■□□□□ 0.99
HSPG2-214ENST00000635682 TNS3Q68CZ2 1445 aa21.25■□□□□ 0.99
HSPG2-214ENST00000635682 SIN3AQ96ST3 1273 aa21.24■□□□□ 0.99
HSPG2-214ENST00000635682 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
HSPG2-214ENST00000635682 SLIT2O94813 1529 aa21.23■□□□□ 0.99
HSPG2-214ENST00000635682 SBNO1A3KN83 1393 aa21.22■□□□□ 0.99
HSPG2-214ENST00000635682 ANKARQ7Z5J8 1434 aa21.21■□□□□ 0.99
HSPG2-214ENST00000635682 RALGAPBQ86X10 1494 aa21.2■□□□□ 0.98
HSPG2-214ENST00000635682 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
HSPG2-214ENST00000635682 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.2■□□□□ 0.98
HSPG2-214ENST00000635682 TONSLQ96HA7 1378 aa21.2■□□□□ 0.98
HSPG2-214ENST00000635682 GLI3P10071 1580 aa21.19■□□□□ 0.98
HSPG2-214ENST00000635682 WASLO00401 505 aaPredicted RBP21.18■□□□□ 0.98
HSPG2-214ENST00000635682 ARHGEF10O15013 1369 aa21.18■□□□□ 0.98
HSPG2-214ENST00000635682 ADGRB2O60241 1585 aa21.18■□□□□ 0.98
HSPG2-214ENST00000635682 EP400Q96L91 3159 aa21.17■□□□□ 0.98
HSPG2-214ENST00000635682 FAM83GA6ND36 823 aa21.17■□□□□ 0.98
HSPG2-214ENST00000635682 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
HSPG2-214ENST00000635682 L3MBTL2Q969R5 705 aa21.16■□□□□ 0.98
HSPG2-214ENST00000635682 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
HSPG2-214ENST00000635682 VPS72Q15906 364 aa21.15■□□□□ 0.98
HSPG2-214ENST00000635682 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
HSPG2-214ENST00000635682 SEPT12Q8IYM1 358 aa21.14■□□□□ 0.97
HSPG2-214ENST00000635682 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
HSPG2-214ENST00000635682 BRWD3Q6RI45 1802 aa21.13■□□□□ 0.97
HSPG2-214ENST00000635682 PLCH1Q4KWH8 1693 aa21.13■□□□□ 0.97
HSPG2-214ENST00000635682 PAK3O75914 559 aaPredicted RBP21.13■□□□□ 0.97
HSPG2-214ENST00000635682 TULP4Q9NRJ4 1543 aa21.13■□□□□ 0.97
HSPG2-214ENST00000635682 TRPM3Q9HCF6 1732 aaPredicted RBP21.12■□□□□ 0.97
HSPG2-214ENST00000635682 EIF3AQ14152 1382 aaKnown RBP21.12■□□□□ 0.97
HSPG2-214ENST00000635682 CCDC125Q86Z20 511 aa21.12■□□□□ 0.97
HSPG2-214ENST00000635682 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
HSPG2-214ENST00000635682 NWD2Q9ULI1 1742 aa21.1■□□□□ 0.97
HSPG2-214ENST00000635682 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms