RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 APLP1P51693 650 aa13.11□□□□□ -0.31
SMARCA2-239ENST00000635388 GRIPAP1Q4V328 841 aa13.11□□□□□ -0.31
SMARCA2-239ENST00000635388 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
SMARCA2-239ENST00000635388 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
SMARCA2-239ENST00000635388 TSR3Q9UJK0 312 aaKnown RBP13.11□□□□□ -0.31
SMARCA2-239ENST00000635388 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
SMARCA2-239ENST00000635388 MTMR2Q13614 643 aa13.09□□□□□ -0.31
SMARCA2-239ENST00000635388 PUS10Q3MIT2 529 aaKnown RBP13.09□□□□□ -0.31
SMARCA2-239ENST00000635388 POTEMA6NI47 508 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 PPP4CP60510 307 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 MTMR14Q8NCE2 650 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 CLUAP1Q96AJ1 413 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 PRR14Q9BWN1 585 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 CC2D2AQ9P2K1 1620 aa13.08□□□□□ -0.32
SMARCA2-239ENST00000635388 THSD4Q6ZMP0 1018 aa13.07□□□□□ -0.32
SMARCA2-239ENST00000635388 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
SMARCA2-239ENST00000635388 SLC27A5Q9Y2P5 690 aa13.07□□□□□ -0.32
SMARCA2-239ENST00000635388 SOCS7O14512 581 aa13.06□□□□□ -0.32
SMARCA2-239ENST00000635388 UBTFP17480 764 aaKnown RBP13.06□□□□□ -0.32
SMARCA2-239ENST00000635388 A6NJR5 290 aa13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 CFAP99D6REC4 459 aa13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 SYMPKQ92797 1274 aaKnown RBP13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 POM121Q96HA1 1249 aa13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SMARCA2-239ENST00000635388 AP1G2O75843 785 aa13.04□□□□□ -0.32
SMARCA2-239ENST00000635388 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SMARCA2-239ENST00000635388 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
SMARCA2-239ENST00000635388 BLOC1S3Q6QNY0 202 aa13.01□□□□□ -0.33
SMARCA2-239ENST00000635388 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
SMARCA2-239ENST00000635388 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
SMARCA2-239ENST00000635388 COG6Q9Y2V7 657 aa13.01□□□□□ -0.33
SMARCA2-239ENST00000635388 RETREG3Q86VR2 466 aa13□□□□□ -0.33
SMARCA2-239ENST00000635388 PCDHB3Q9Y5E6 796 aa13□□□□□ -0.33
SMARCA2-239ENST00000635388 CTDSPL2Q05D32 466 aa12.99□□□□□ -0.33
SMARCA2-239ENST00000635388 PRR7Q8TB68 274 aa12.99□□□□□ -0.33
SMARCA2-239ENST00000635388 THAP11Q96EK4 314 aa12.99□□□□□ -0.33
SMARCA2-239ENST00000635388 Q3C1V9 767 aa12.98□□□□□ -0.33
SMARCA2-239ENST00000635388 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-239ENST00000635388 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-239ENST00000635388 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
SMARCA2-239ENST00000635388 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
SMARCA2-239ENST00000635388 BRICD5Q6PL45 260 aa12.97□□□□□ -0.33
SMARCA2-239ENST00000635388 SCUBE3Q8IX30 993 aa12.97□□□□□ -0.33
SMARCA2-239ENST00000635388 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
SMARCA2-239ENST00000635388 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.33
SMARCA2-239ENST00000635388 TRAK2O60296 914 aa12.95□□□□□ -0.34
SMARCA2-239ENST00000635388 PROSER2Q86WR7 435 aaPredicted RBP12.95□□□□□ -0.34
SMARCA2-239ENST00000635388 C1orf115Q9H7X2 142 aa12.95□□□□□ -0.34
SMARCA2-239ENST00000635388 LRRN4Q8WUT4 740 aa12.94□□□□□ -0.34
SMARCA2-239ENST00000635388 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
SMARCA2-239ENST00000635388 GPR37L1O60883 481 aa12.93□□□□□ -0.34
SMARCA2-239ENST00000635388 NR1I2O75469 434 aa12.93□□□□□ -0.34
SMARCA2-239ENST00000635388 DESI1Q6ICB0 168 aa12.93□□□□□ -0.34
SMARCA2-239ENST00000635388 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-239ENST00000635388 NYAP1Q6ZVC0 841 aa12.92□□□□□ -0.34
SMARCA2-239ENST00000635388 TSC1Q92574 1164 aa12.92□□□□□ -0.34
SMARCA2-239ENST00000635388 USB1Q9BQ65 265 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-239ENST00000635388 TBC1D2BQ9UPU7 963 aa12.92□□□□□ -0.34
SMARCA2-239ENST00000635388 RAD21O60216 631 aa12.91□□□□□ -0.34
SMARCA2-239ENST00000635388 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
SMARCA2-239ENST00000635388 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-239ENST00000635388 ARID3CA6NKF2 412 aa12.88□□□□□ -0.35
SMARCA2-239ENST00000635388 APBB1O00213 710 aa12.88□□□□□ -0.35
SMARCA2-239ENST00000635388 COPS2P61201 443 aa12.88□□□□□ -0.35
SMARCA2-239ENST00000635388 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
SMARCA2-239ENST00000635388 MYT1LQ9UL68 1186 aa12.87□□□□□ -0.35
SMARCA2-239ENST00000635388 PTPN5P54829 565 aa12.86□□□□□ -0.35
SMARCA2-239ENST00000635388 MSS51Q4VC12 460 aa12.86□□□□□ -0.35
SMARCA2-239ENST00000635388 LYPD8Q6UX82 237 aa12.86□□□□□ -0.35
SMARCA2-239ENST00000635388 MTRQ99707 1265 aa12.86□□□□□ -0.35
SMARCA2-239ENST00000635388 NDUFB9Q9Y6M9 179 aa12.86□□□□□ -0.35
SMARCA2-239ENST00000635388 FAM160A2Q8N612 972 aaPredicted RBP12.85□□□□□ -0.35
SMARCA2-239ENST00000635388 TLL1O43897 1013 aa12.84□□□□□ -0.35
SMARCA2-239ENST00000635388 JUNDP17535 347 aa12.84□□□□□ -0.35
SMARCA2-239ENST00000635388 IRF5Q13568 498 aa12.84□□□□□ -0.35
SMARCA2-239ENST00000635388 ZPR1O75312 459 aa12.83□□□□□ -0.36
SMARCA2-239ENST00000635388 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
SMARCA2-239ENST00000635388 SPSB2Q99619 263 aa12.83□□□□□ -0.36
SMARCA2-239ENST00000635388 ABL2P42684 1182 aa12.82□□□□□ -0.36
SMARCA2-239ENST00000635388 PRDM9Q9NQV7 894 aa12.82□□□□□ -0.36
SMARCA2-239ENST00000635388 DXOO77932 396 aaKnown RBP12.81□□□□□ -0.36
SMARCA2-239ENST00000635388 F12P00748 615 aaPredicted RBP12.81□□□□□ -0.36
SMARCA2-239ENST00000635388 NR6A1Q15406 480 aa12.81□□□□□ -0.36
SMARCA2-239ENST00000635388 PRM3Q9NNZ6 103 aa12.81□□□□□ -0.36
SMARCA2-239ENST00000635388 MMP16P51512 607 aa12.8□□□□□ -0.36
SMARCA2-239ENST00000635388 PTPRNQ16849 979 aa12.8□□□□□ -0.36
SMARCA2-239ENST00000635388 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
SMARCA2-239ENST00000635388 ADH1BP00325 375 aa12.79□□□□□ -0.36
SMARCA2-239ENST00000635388 ZNF516Q92618 1163 aa12.79□□□□□ -0.36
SMARCA2-239ENST00000635388 IL21Q9HBE4 155 aa12.78□□□□□ -0.36
SMARCA2-239ENST00000635388 ZNF777Q9ULD5 760 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-239ENST00000635388 ZNF330Q9Y3S2 320 aaPredicted RBP12.78□□□□□ -0.36
SMARCA2-239ENST00000635388 POM121CA8CG34 1229 aa12.76□□□□□ -0.37
SMARCA2-239ENST00000635388 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
SMARCA2-239ENST00000635388 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms