RNA–Protein interactions for RNA: ENST00000633225.1

SKIDA1-204, Transcript of SKI/DACH domain containing 1, humanhuman

TSL 1 (best)

Gene SKIDA1, Length 1,452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-204ENST00000633225 MSH6P52701 1360 aa27.29■■□□□ 1.96
SKIDA1-204ENST00000633225 EIF3AQ14152 1382 aaKnown RBP27.29■■□□□ 1.96
SKIDA1-204ENST00000633225 USP47Q96K76 1375 aa27.28■■□□□ 1.96
SKIDA1-204ENST00000633225 CDC42BPGQ6DT37 1551 aa27.28■■□□□ 1.96
SKIDA1-204ENST00000633225 CENPJQ9HC77 1338 aaPredicted RBP27.28■■□□□ 1.96
SKIDA1-204ENST00000633225 C14orf37Q86TY3 774 aa27.28■■□□□ 1.96
SKIDA1-204ENST00000633225 DCCP43146 1447 aa27.28■■□□□ 1.96
SKIDA1-204ENST00000633225 C19orf44Q9H6X5 657 aa27.27■■□□□ 1.96
SKIDA1-204ENST00000633225 MINK1Q8N4C8 1332 aaPredicted RBP27.25■■□□□ 1.95
SKIDA1-204ENST00000633225 HIRIP3Q9BW71 556 aaPredicted RBP27.24■■□□□ 1.95
SKIDA1-204ENST00000633225 FMN2Q9NZ56 1722 aa27.22■■□□□ 1.95
SKIDA1-204ENST00000633225 TULP4Q9NRJ4 1543 aa27.21■■□□□ 1.95
SKIDA1-204ENST00000633225 ST20-MTHFSA0A0A6YYL1 179 aa27.2■■□□□ 1.95
SKIDA1-204ENST00000633225 MST1RQ04912 1400 aa27.2■■□□□ 1.94
SKIDA1-204ENST00000633225 SBNO2Q9Y2G9 1366 aa27.2■■□□□ 1.94
SKIDA1-204ENST00000633225 ZEB1P37275 1124 aaPredicted RBP27.18■■□□□ 1.94
SKIDA1-204ENST00000633225 CADPS2Q86UW7 1296 aa27.18■■□□□ 1.94
SKIDA1-204ENST00000633225 TESK2Q96S53 571 aa27.18■■□□□ 1.94
SKIDA1-204ENST00000633225 ATF3P18847 181 aa27.17■■□□□ 1.94
SKIDA1-204ENST00000633225 USP32Q8NFA0 1604 aa27.16■■□□□ 1.94
SKIDA1-204ENST00000633225 UBAP1LF5GYI3 381 aa27.14■■□□□ 1.94
SKIDA1-204ENST00000633225 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
SKIDA1-204ENST00000633225 HSPA5P11021 654 aaKnown RBP27.13■■□□□ 1.93
SKIDA1-204ENST00000633225 C1orf167Q5SNV9 1468 aa27.13■■□□□ 1.93
SKIDA1-204ENST00000633225 EIF4G2P78344 907 aaKnown RBP eCLIP27.13■■□□□ 1.93
SKIDA1-204ENST00000633225 TOM1O60784 492 aa27.12■■□□□ 1.93
SKIDA1-204ENST00000633225 RGPD8O14715 1765 aaPredicted RBP27.12■■□□□ 1.93
SKIDA1-204ENST00000633225 NUTM2FA1L443 756 aa27.11■■□□□ 1.93
SKIDA1-204ENST00000633225 SLAIN2Q9P270 581 aa27.11■■□□□ 1.93
SKIDA1-204ENST00000633225 ATP7BP35670 1465 aa27.1■■□□□ 1.93
SKIDA1-204ENST00000633225 PRR36Q9H6K5 1346 aa27.1■■□□□ 1.93
SKIDA1-204ENST00000633225 CDK19Q9BWU1 502 aa27.09■■□□□ 1.93
SKIDA1-204ENST00000633225 ROBO1Q9Y6N7 1651 aa27.09■■□□□ 1.93
SKIDA1-204ENST00000633225 ANKARQ7Z5J8 1434 aa27.08■■□□□ 1.93
SKIDA1-204ENST00000633225 DISP3Q9P2K9 1392 aa27.07■■□□□ 1.92
SKIDA1-204ENST00000633225 TOPAZ1Q8N9V7 1692 aa27.06■■□□□ 1.92
SKIDA1-204ENST00000633225 EVC2Q86UK5 1308 aa27.06■■□□□ 1.92
SKIDA1-204ENST00000633225 CABP2Q9NPB3 220 aa27.05■■□□□ 1.92
SKIDA1-204ENST00000633225 PIP4K2BP78356 416 aa27.04■■□□□ 1.92
SKIDA1-204ENST00000633225 ORAI2Q96SN7 254 aa27.03■■□□□ 1.92
SKIDA1-204ENST00000633225 BRINP3Q76B58 766 aa27.02■■□□□ 1.92
SKIDA1-204ENST00000633225 ITSN1Q15811 1721 aa27.01■■□□□ 1.91
SKIDA1-204ENST00000633225 SRPK2P78362 688 aaKnown RBP27.01■■□□□ 1.91
SKIDA1-204ENST00000633225 NUDT16Q96DE0 195 aaKnown RBP27■■□□□ 1.91
SKIDA1-204ENST00000633225 SCAF1Q9H7N4 1312 aaKnown RBP26.99■■□□□ 1.91
SKIDA1-204ENST00000633225 FBXO41Q8TF61 875 aa26.99■■□□□ 1.91
SKIDA1-204ENST00000633225 ESCO1Q5FWF5 840 aa26.98■■□□□ 1.91
SKIDA1-204ENST00000633225 KIF1AQ12756 1690 aa26.98■■□□□ 1.91
SKIDA1-204ENST00000633225 NHSL1Q5SYE7 1610 aa26.97■■□□□ 1.91
SKIDA1-204ENST00000633225 TMF1P82094 1093 aa26.97■■□□□ 1.91
SKIDA1-204ENST00000633225 ATAD2Q6PL18 1390 aa26.95■■□□□ 1.9
SKIDA1-204ENST00000633225 AHDC1Q5TGY3 1603 aaPredicted RBP26.95■■□□□ 1.9
SKIDA1-204ENST00000633225 SLC24A1O60721 1099 aa26.94■■□□□ 1.9
SKIDA1-204ENST00000633225 PPIP5K1Q6PFW1 1433 aa26.94■■□□□ 1.9
SKIDA1-204ENST00000633225 C11orf95C9JLR9 678 aaPredicted RBP26.93■■□□□ 1.9
SKIDA1-204ENST00000633225 CCDC61Q9Y6R9 512 aa26.93■■□□□ 1.9
SKIDA1-204ENST00000633225 PHF8Q9UPP1 1060 aa26.93■■□□□ 1.9
SKIDA1-204ENST00000633225 PMFBP1Q8TBY8 1022 aa26.92■■□□□ 1.9
SKIDA1-204ENST00000633225 DDX17Q92841 729 aaKnown RBP26.92■■□□□ 1.9
SKIDA1-204ENST00000633225 PUS7Q96PZ0 661 aaKnown RBP26.92■■□□□ 1.9
SKIDA1-204ENST00000633225 MYOM1P52179 1685 aa26.91■■□□□ 1.9
SKIDA1-204ENST00000633225 COL16A1Q07092 1604 aaPredicted RBP26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 PLEKHG3A1L390 1219 aa26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 CABP1Q9NZU7 370 aa26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 PHLPP1O60346 1717 aa26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 PXDNQ92626 1479 aa26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 POLR3AO14802 1390 aaPredicted RBP26.88■■□□□ 1.89
SKIDA1-204ENST00000633225 CD163L1Q9NR16 1453 aa26.87■■□□□ 1.89
SKIDA1-204ENST00000633225 FOXO3O43524 673 aa26.87■■□□□ 1.89
SKIDA1-204ENST00000633225 CDCA8Q53HL2 280 aa26.85■■□□□ 1.89
SKIDA1-204ENST00000633225 AKAP12Q02952 1782 aa26.84■■□□□ 1.89
SKIDA1-204ENST00000633225 ACEP12821 1306 aa26.84■■□□□ 1.89
SKIDA1-204ENST00000633225 KIF7Q2M1P5 1343 aa26.84■■□□□ 1.89
SKIDA1-204ENST00000633225 NPHP3Q7Z494 1330 aa26.84■■□□□ 1.89
SKIDA1-204ENST00000633225 HSPA1LP34931 641 aa26.83■■□□□ 1.89
SKIDA1-204ENST00000633225 SLC12A5Q9H2X9 1139 aa26.83■■□□□ 1.89
SKIDA1-204ENST00000633225 TRPM3Q9HCF6 1732 aaPredicted RBP26.83■■□□□ 1.89
SKIDA1-204ENST00000633225 SOS2Q07890 1332 aaPredicted RBP26.83■■□□□ 1.88
SKIDA1-204ENST00000633225 XPCQ01831 940 aaPredicted RBP26.82■■□□□ 1.88
SKIDA1-204ENST00000633225 CPSF1Q10570 1443 aaKnown RBP26.81■■□□□ 1.88
SKIDA1-204ENST00000633225 NGDNQ8NEJ9 315 aaKnown RBP26.81■■□□□ 1.88
SKIDA1-204ENST00000633225 TMC1Q8TDI8 760 aa26.81■■□□□ 1.88
SKIDA1-204ENST00000633225 NINLQ9Y2I6 1382 aa26.8■■□□□ 1.88
SKIDA1-204ENST00000633225 MON2Q7Z3U7 1717 aa26.79■■□□□ 1.88
SKIDA1-204ENST00000633225 NRKQ7Z2Y5 1582 aa26.79■■□□□ 1.88
SKIDA1-204ENST00000633225 WASHC2AQ641Q2 1341 aa26.78■■□□□ 1.88
SKIDA1-204ENST00000633225 A0A1W2PP64 1363 aa26.78■■□□□ 1.88
SKIDA1-204ENST00000633225 CCDC7Q96M83 1385 aa26.78■■□□□ 1.88
SKIDA1-204ENST00000633225 POLR3GLQ9BT43 218 aa26.78■■□□□ 1.88
SKIDA1-204ENST00000633225 USP6P35125 1406 aa26.77■■□□□ 1.88
SKIDA1-204ENST00000633225 KRT28Q7Z3Y7 464 aa26.76■■□□□ 1.87
SKIDA1-204ENST00000633225 ILDR1Q86SU0 546 aaPredicted RBP26.75■■□□□ 1.87
SKIDA1-204ENST00000633225 PSME1Q06323 249 aa26.74■■□□□ 1.87
SKIDA1-204ENST00000633225 SSH2Q76I76 1423 aa26.74■■□□□ 1.87
SKIDA1-204ENST00000633225 ANKRD36BQ8N2N9 1353 aa26.74■■□□□ 1.87
SKIDA1-204ENST00000633225 ALS2Q96Q42 1657 aa26.73■■□□□ 1.87
SKIDA1-204ENST00000633225 SBNO1A3KN83 1393 aa26.72■■□□□ 1.87
SKIDA1-204ENST00000633225 TNS3Q68CZ2 1445 aa26.72■■□□□ 1.87
SKIDA1-204ENST00000633225 KTN1Q86UP2 1357 aaKnown RBP26.71■■□□□ 1.87
SKIDA1-204ENST00000633225 SPATA31A3Q5VYP0 1347 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms