RNA–Protein interactions for RNA: ENST00000633167.1

PHACTR4-208, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 5

Gene PHACTR4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-208ENST00000633167 IRF6O14896 467 aa8.59□□□□□ -1.03
PHACTR4-208ENST00000633167 KDM4AO75164 1064 aa8.59□□□□□ -1.03
PHACTR4-208ENST00000633167 CTC1Q2NKJ3 1217 aa8.59□□□□□ -1.03
PHACTR4-208ENST00000633167 CYP4X1Q8N118 509 aa8.59□□□□□ -1.03
PHACTR4-208ENST00000633167 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
PHACTR4-208ENST00000633167 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
PHACTR4-208ENST00000633167 SMCPP49901 116 aaPredicted RBP8.57□□□□□ -1.04
PHACTR4-208ENST00000633167 USB1Q9BQ65 265 aaKnown RBP8.57□□□□□ -1.04
PHACTR4-208ENST00000633167 POTECB2RU33 542 aa8.56□□□□□ -1.04
PHACTR4-208ENST00000633167 WNT7AO00755 349 aa8.56□□□□□ -1.04
PHACTR4-208ENST00000633167 ST8SIA5O15466 376 aa8.56□□□□□ -1.04
PHACTR4-208ENST00000633167 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
PHACTR4-208ENST00000633167 TRIM32Q13049 653 aa8.55□□□□□ -1.04
PHACTR4-208ENST00000633167 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
PHACTR4-208ENST00000633167 TTC24A2A3L6 582 aaPredicted RBP8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 AXIN1O15169 862 aa8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 HOXA2O43364 376 aa8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 CLCN1P35523 988 aa8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 GPCPD1Q9NPB8 672 aa8.53□□□□□ -1.04
PHACTR4-208ENST00000633167 SNIP1Q8TAD8 396 aaKnown RBP8.52□□□□□ -1.05
PHACTR4-208ENST00000633167 CCDC102AQ96A19 550 aa8.52□□□□□ -1.05
PHACTR4-208ENST00000633167 WNT7BP56706 349 aa8.49□□□□□ -1.05
PHACTR4-208ENST00000633167 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
PHACTR4-208ENST00000633167 FAM217BQ9NTX9 383 aaPredicted RBP8.49□□□□□ -1.05
PHACTR4-208ENST00000633167 SMPD1P17405 629 aa8.48□□□□□ -1.05
PHACTR4-208ENST00000633167 MRGPRX2Q96LB1 330 aa8.48□□□□□ -1.05
PHACTR4-208ENST00000633167 JUNDP17535 347 aa8.47□□□□□ -1.05
PHACTR4-208ENST00000633167 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 RETREG3Q86VR2 466 aa8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 KRI1Q8N9T8 703 aaKnown RBP8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 HLA-CQ95604 372 aa8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 GMPR2Q9P2T1 348 aaKnown RBP8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
PHACTR4-208ENST00000633167 C11orf95C9JLR9 678 aaPredicted RBP8.45□□□□□ -1.06
PHACTR4-208ENST00000633167 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.44□□□□□ -1.06
PHACTR4-208ENST00000633167 CCDC24Q8N4L8 307 aa8.44□□□□□ -1.06
PHACTR4-208ENST00000633167 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
PHACTR4-208ENST00000633167 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
PHACTR4-208ENST00000633167 ATP13A2Q9NQ11 1180 aa8.43□□□□□ -1.06
PHACTR4-208ENST00000633167 J3QL48 77 aa8.42□□□□□ -1.06
PHACTR4-208ENST00000633167 FDX1P10109 184 aa8.41□□□□□ -1.06
PHACTR4-208ENST00000633167 SKOR1P84550 965 aa8.41□□□□□ -1.06
PHACTR4-208ENST00000633167 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
PHACTR4-208ENST00000633167 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
PHACTR4-208ENST00000633167 WFS1O76024 890 aa8.4□□□□□ -1.06
PHACTR4-208ENST00000633167 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
PHACTR4-208ENST00000633167 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
PHACTR4-208ENST00000633167 SYMPKQ92797 1274 aaKnown RBP8.39□□□□□ -1.07
PHACTR4-208ENST00000633167 MS4A1P11836 297 aa8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 SSTR3P32745 418 aaPredicted RBP8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 AMHR2Q16671 573 aa8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 PTPRNQ16849 979 aa8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 BARGINQ6ZT62 677 aa8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 HPS1Q92902 700 aa8.38□□□□□ -1.07
PHACTR4-208ENST00000633167 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
PHACTR4-208ENST00000633167 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
PHACTR4-208ENST00000633167 CCNYL3P0C7X3 344 aa8.37□□□□□ -1.07
PHACTR4-208ENST00000633167 SPIRE2Q8WWL2 714 aa8.37□□□□□ -1.07
PHACTR4-208ENST00000633167 PCDHGC3Q9UN70 934 aa8.37□□□□□ -1.07
PHACTR4-208ENST00000633167 SIAH2O43255 324 aa8.36□□□□□ -1.07
PHACTR4-208ENST00000633167 GJA5P36382 358 aa8.36□□□□□ -1.07
PHACTR4-208ENST00000633167 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
PHACTR4-208ENST00000633167 DESI1Q6ICB0 168 aa8.36□□□□□ -1.07
PHACTR4-208ENST00000633167 WIPF1O43516 503 aa8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 ZMYND10O75800 440 aa8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 TTLL12Q14166 644 aaPredicted RBP8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 PTCRAQ6ISU1 281 aaPredicted RBP8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 EHBP1Q8NDI1 1231 aa8.35□□□□□ -1.07
PHACTR4-208ENST00000633167 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
PHACTR4-208ENST00000633167 SNRPBP14678 240 aaKnown RBP8.33□□□□□ -1.08
PHACTR4-208ENST00000633167 MOXD2PA6NHM9 499 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 SH3BP2P78314 561 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 MTMR2Q13614 643 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 GIGYF2Q6Y7W6 1299 aaKnown RBP8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 MPNDQ8N594 471 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 WASF2Q9Y6W5 498 aa8.32□□□□□ -1.08
PHACTR4-208ENST00000633167 INSM1Q01101 510 aaPredicted RBP8.31□□□□□ -1.08
PHACTR4-208ENST00000633167 KCNH2Q12809 1159 aa8.31□□□□□ -1.08
PHACTR4-208ENST00000633167 PRR7Q8TB68 274 aa8.31□□□□□ -1.08
PHACTR4-208ENST00000633167 NDUFV2P19404 249 aa8.3□□□□□ -1.08
PHACTR4-208ENST00000633167 STK17AQ9UEE5 414 aa8.3□□□□□ -1.08
PHACTR4-208ENST00000633167 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
PHACTR4-208ENST00000633167 ZC3H15Q8WU90 426 aaKnown RBP8.29□□□□□ -1.08
PHACTR4-208ENST00000633167 BEGAINQ9BUH8 593 aa8.29□□□□□ -1.08
PHACTR4-208ENST00000633167 CAPN5O15484 640 aaPredicted RBP8.28□□□□□ -1.08
PHACTR4-208ENST00000633167 VARSP26640 1264 aaKnown RBP8.28□□□□□ -1.08
PHACTR4-208ENST00000633167 NPAS3Q8IXF0 933 aa8.28□□□□□ -1.08
PHACTR4-208ENST00000633167 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
PHACTR4-208ENST00000633167 RSBN1LQ6PCB5 846 aaPredicted RBP8.26□□□□□ -1.09
PHACTR4-208ENST00000633167 SLC16A10Q8TF71 515 aa8.26□□□□□ -1.09
PHACTR4-208ENST00000633167 BAP1Q92560 729 aa8.26□□□□□ -1.09
PHACTR4-208ENST00000633167 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
PHACTR4-208ENST00000633167 SPTLC1O15269 473 aa8.25□□□□□ -1.09
PHACTR4-208ENST00000633167 PRPF38BQ5VTL8 546 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms