RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ZFYVE27Q5T4F4 411 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 KRBA2Q6ZNG9 492 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
SDCBP-213ENST00000630925 C7P10643 843 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 SPOCK3Q9BQ16 436 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 CHPF2Q9P2E5 772 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 PNMA2Q9UL42 364 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 TBX22Q9Y458 520 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-213ENST00000630925 SDE2Q6IQ49 451 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 BANK1Q8NDB2 785 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 ADAMTS19Q8TE59 1207 aa6.48□□□□□ -1.37
SDCBP-213ENST00000630925 REPIN1Q9BWE0 567 aaKnown RBP6.48□□□□□ -1.37
SDCBP-213ENST00000630925 CUEDC1Q9NWM3 386 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-213ENST00000630925 NAP1L2Q9ULW6 460 aaPredicted RBP6.48□□□□□ -1.37
SDCBP-213ENST00000630925 WDR62O43379 1518 aa6.47□□□□□ -1.37
SDCBP-213ENST00000630925 SH3BP5O60239 455 aa6.47□□□□□ -1.37
SDCBP-213ENST00000630925 MYBPC2Q14324 1141 aa6.47□□□□□ -1.37
SDCBP-213ENST00000630925 NLGN1Q8N2Q7 840 aa6.47□□□□□ -1.37
SDCBP-213ENST00000630925 ZNF579Q8NAF0 562 aaKnown RBP6.47□□□□□ -1.37
SDCBP-213ENST00000630925 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.47□□□□□ -1.37
SDCBP-213ENST00000630925 LARP6Q9BRS8 491 aaKnown RBP6.46□□□□□ -1.37
SDCBP-213ENST00000630925 GABBR1Q9UBS5 961 aa6.46□□□□□ -1.37
SDCBP-213ENST00000630925 EXOC5O00471 708 aa6.46□□□□□ -1.38
SDCBP-213ENST00000630925 C4orf46Q504U0 113 aa6.46□□□□□ -1.38
SDCBP-213ENST00000630925 LAMC3Q9Y6N6 1575 aa6.46□□□□□ -1.38
SDCBP-213ENST00000630925 LMTK3Q96Q04 1460 aa6.45□□□□□ -1.38
SDCBP-213ENST00000630925 PDAP1Q13442 181 aaKnown RBP6.45□□□□□ -1.38
SDCBP-213ENST00000630925 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
SDCBP-213ENST00000630925 RTL5Q5HYW3 569 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-213ENST00000630925 SOCS7O14512 581 aa6.45□□□□□ -1.38
SDCBP-213ENST00000630925 ZNF467Q7Z7K2 595 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-213ENST00000630925 MTMR14Q8NCE2 650 aa6.45□□□□□ -1.38
SDCBP-213ENST00000630925 CCER2I3L3R5 266 aa6.44□□□□□ -1.38
SDCBP-213ENST00000630925 TSHZ1Q6ZSZ6 1077 aa6.44□□□□□ -1.38
SDCBP-213ENST00000630925 IPO4Q8TEX9 1081 aaKnown RBP6.44□□□□□ -1.38
SDCBP-213ENST00000630925 OTUD5Q96G74 571 aa6.44□□□□□ -1.38
SDCBP-213ENST00000630925 BRINP2Q9C0B6 783 aa6.44□□□□□ -1.38
SDCBP-213ENST00000630925 ATG7O95352 703 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 ERCC5P28715 1186 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 CCDC144BQ3MJ40 725 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 RINLQ6ZS11 566 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 CCER1Q8TC90 406 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 NOP58Q9Y2X3 529 aaKnown RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 MRC2Q9UBG0 1479 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 ABL2P42684 1182 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 PHLDB3Q6NSJ2 640 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 PPP1R12CQ9BZL4 782 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 PIF1Q9H611 641 aa6.43□□□□□ -1.38
SDCBP-213ENST00000630925 GNL3LQ9NVN8 582 aaKnown RBP6.43□□□□□ -1.38
SDCBP-213ENST00000630925 FECHP22830 423 aa6.42□□□□□ -1.38
SDCBP-213ENST00000630925 TAGLNQ01995 201 aaKnown RBP6.42□□□□□ -1.38
SDCBP-213ENST00000630925 HDGFL1Q5TGJ6 251 aa6.42□□□□□ -1.38
SDCBP-213ENST00000630925 CACTIN-AS1Q8N1I8 211 aa6.42□□□□□ -1.38
SDCBP-213ENST00000630925 RFC5P40937 340 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 TCEAL1Q15170 157 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 ILDR2Q71H61 639 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 C11orf96Q7Z7L8 435 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 PIK3R5Q8WYR1 880 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 TANGO6Q9C0B7 1094 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 ZRANB1Q9UGI0 708 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 KDM4FA0A1W2PPD8 638 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 ANKRD33BA6NCL7 494 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 KIF4AO95239 1232 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 B4GALNT3Q6L9W6 998 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 SDR16C5Q8N3Y7 309 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 FAM212AQ96EL1 285 aa6.41□□□□□ -1.38
SDCBP-213ENST00000630925 PPP4CP60510 307 aa6.4□□□□□ -1.38
SDCBP-213ENST00000630925 FBXO33Q7Z6M2 555 aa6.4□□□□□ -1.38
SDCBP-213ENST00000630925 CCDC146Q8IYE0 955 aa6.4□□□□□ -1.38
SDCBP-213ENST00000630925 PDS5BQ9NTI5 1447 aa6.4□□□□□ -1.38
SDCBP-213ENST00000630925 LIG1P18858 919 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 GYS2P54840 703 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 PLEKHG6Q3KR16 790 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 PNISRQ8TF01 805 aaKnown RBP6.4□□□□□ -1.39
SDCBP-213ENST00000630925 DHX38Q92620 1227 aaKnown RBP6.4□□□□□ -1.39
SDCBP-213ENST00000630925 DDX27Q96GQ7 796 aaKnown RBP6.4□□□□□ -1.39
SDCBP-213ENST00000630925 CRISPLD2Q9H0B8 497 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 IRF2BPLQ9H1B7 796 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 POLR3EQ9NVU0 708 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 COMMD10Q9Y6G5 202 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 HMGXB3Q12766 1538 aa6.4□□□□□ -1.39
SDCBP-213ENST00000630925 ATAD2BQ9ULI0 1458 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 GNPATO15228 680 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 BDNFP23560 247 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 PDE4AP27815 886 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 RHBDL3P58872 404 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 FAM193AP78312 1265 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 FBXO41Q8TF61 875 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 TBC1D2BQ9UPU7 963 aa6.39□□□□□ -1.39
SDCBP-213ENST00000630925 SOWAHDA6NJG2 315 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 PHF14O94880 888 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 IBSPP21815 317 aaPredicted RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 TBX4P57082 545 aa6.38□□□□□ -1.39
SDCBP-213ENST00000630925 HDLBPQ00341 1268 aaKnown RBP6.38□□□□□ -1.39
SDCBP-213ENST00000630925 TSNAXIP1Q2TAA8 658 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms