RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SASS6Q6UVJ0 657 aa14.24□□□□□ -0.13
SHPRH-211ENST00000629427 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
SHPRH-211ENST00000629427 KDM4AO75164 1064 aa14.24□□□□□ -0.13
SHPRH-211ENST00000629427 INTS3Q68E01 1043 aaKnown RBP14.23□□□□□ -0.13
SHPRH-211ENST00000629427 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
SHPRH-211ENST00000629427 ZFYVE27Q5T4F4 411 aa14.23□□□□□ -0.13
SHPRH-211ENST00000629427 BRMS1Q9HCU9 246 aa14.23□□□□□ -0.13
SHPRH-211ENST00000629427 CCAR1Q8IX12 1150 aaKnown RBP14.22□□□□□ -0.13
SHPRH-211ENST00000629427 HSP90AB4PQ58FF6 505 aa14.22□□□□□ -0.13
SHPRH-211ENST00000629427 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.13
SHPRH-211ENST00000629427 MIA2Q96PC5 1412 aa14.21□□□□□ -0.13
SHPRH-211ENST00000629427 KIF6Q6ZMV9 814 aa14.21□□□□□ -0.13
SHPRH-211ENST00000629427 TMEM132AQ24JP5 1023 aa14.21□□□□□ -0.13
SHPRH-211ENST00000629427 FANCD2Q9BXW9 1451 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 TSHZ2Q9NRE2 1034 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 XBP1P17861 261 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 ABTB2Q8N961 1025 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 GNAI1P63096 354 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 LNPKQ9C0E8 428 aa14.2□□□□□ -0.14
SHPRH-211ENST00000629427 UBTFL1P0CB47 393 aaPredicted RBP14.19□□□□□ -0.14
SHPRH-211ENST00000629427 CABP2Q9NPB3 220 aa14.19□□□□□ -0.14
SHPRH-211ENST00000629427 NINLQ9Y2I6 1382 aa14.19□□□□□ -0.14
SHPRH-211ENST00000629427 NLRP6P59044 892 aa14.18□□□□□ -0.14
SHPRH-211ENST00000629427 WWC2Q6AWC2 1192 aa14.18□□□□□ -0.14
SHPRH-211ENST00000629427 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
SHPRH-211ENST00000629427 PRKRIP1Q9H875 184 aaPredicted RBP14.18□□□□□ -0.14
SHPRH-211ENST00000629427 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
SHPRH-211ENST00000629427 RUFY1Q96T51 708 aa14.18□□□□□ -0.14
SHPRH-211ENST00000629427 ZBED9Q6R2W3 1325 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 HSP90AB2PQ58FF8 381 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 HSP90AA2PQ14568 343 aaPredicted RBP14.17□□□□□ -0.14
SHPRH-211ENST00000629427 CCDC73Q6ZRK6 1079 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
SHPRH-211ENST00000629427 GGNBP2Q9H3C7 697 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 OLFM4Q6UX06 510 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 OFD1O75665 1012 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 CNTROBQ8N137 903 aa14.17□□□□□ -0.14
SHPRH-211ENST00000629427 SF3B2Q13435 895 aaKnown RBP14.16□□□□□ -0.14
SHPRH-211ENST00000629427 TBC1D2BQ9UPU7 963 aa14.16□□□□□ -0.14
SHPRH-211ENST00000629427 ZNF771Q7L3S4 317 aaPredicted RBP14.15□□□□□ -0.14
SHPRH-211ENST00000629427 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
SHPRH-211ENST00000629427 GPRASP1Q5JY77 1395 aa14.15□□□□□ -0.14
SHPRH-211ENST00000629427 RRP12Q5JTH9 1297 aaKnown RBP14.15□□□□□ -0.14
SHPRH-211ENST00000629427 SART3Q15020 963 aaKnown RBP14.15□□□□□ -0.14
SHPRH-211ENST00000629427 PDILTQ8N807 584 aa14.15□□□□□ -0.14
SHPRH-211ENST00000629427 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.15
SHPRH-211ENST00000629427 SMARCA4P51532 1647 aa14.14□□□□□ -0.15
SHPRH-211ENST00000629427 GSE1Q14687 1217 aa14.14□□□□□ -0.15
SHPRH-211ENST00000629427 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
SHPRH-211ENST00000629427 ATP2B2Q01814 1243 aa14.14□□□□□ -0.15
SHPRH-211ENST00000629427 DNAJC2Q99543 621 aaKnown RBP14.14□□□□□ -0.15
SHPRH-211ENST00000629427 SLC3A2P08195 630 aaKnown RBP14.14□□□□□ -0.15
SHPRH-211ENST00000629427 TEX35Q5T0J7 233 aa14.14□□□□□ -0.15
SHPRH-211ENST00000629427 PSMA5P28066 241 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 PAF1Q8N7H5 531 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 AK7Q96M32 723 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 FSD1Q9BTV5 496 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 SMG6Q86US8 1419 aaKnown RBP14.13□□□□□ -0.15
SHPRH-211ENST00000629427 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 CNNM1Q9NRU3 951 aa14.13□□□□□ -0.15
SHPRH-211ENST00000629427 NUCB2P80303 420 aa14.12□□□□□ -0.15
SHPRH-211ENST00000629427 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.12□□□□□ -0.15
SHPRH-211ENST00000629427 NUTM2BA6NNL0 878 aaPredicted RBP14.12□□□□□ -0.15
SHPRH-211ENST00000629427 NUTM2EB1AL46 878 aaPredicted RBP14.12□□□□□ -0.15
SHPRH-211ENST00000629427 NUTM2AQ8IVF1 878 aaPredicted RBP14.12□□□□□ -0.15
SHPRH-211ENST00000629427 NAT10Q9H0A0 1025 aaKnown RBP14.12□□□□□ -0.15
SHPRH-211ENST00000629427 GAPVD1Q14C86 1478 aa14.12□□□□□ -0.15
SHPRH-211ENST00000629427 TTLL5Q6EMB2 1281 aa14.12□□□□□ -0.15
SHPRH-211ENST00000629427 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
SHPRH-211ENST00000629427 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
SHPRH-211ENST00000629427 CCDC173Q0VFZ6 552 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 CLASRPQ8N2M8 674 aaKnown RBP14.11□□□□□ -0.15
SHPRH-211ENST00000629427 ZNF428Q96B54 188 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 TTC39AQ5SRH9 613 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 STK11IPQ8N1F8 1099 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 PANK1Q8TE04 598 aa14.11□□□□□ -0.15
SHPRH-211ENST00000629427 ATP2B1P20020 1258 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 CAGE1Q8TC20 777 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 C22orf23Q9BZE7 217 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 CUX1P39880 1505 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 MYOM3Q5VTT5 1437 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 CDR1P51861 262 aa14.1□□□□□ -0.15
SHPRH-211ENST00000629427 PLEKHO1Q53GL0 409 aaPredicted RBP14.1□□□□□ -0.15
SHPRH-211ENST00000629427 SURF6O75683 361 aaKnown RBP14.09□□□□□ -0.15
SHPRH-211ENST00000629427 MNS1Q8NEH6 495 aa14.09□□□□□ -0.15
SHPRH-211ENST00000629427 PROSER2Q86WR7 435 aaPredicted RBP14.09□□□□□ -0.15
SHPRH-211ENST00000629427 TXNDC2Q86VQ3 553 aa14.08□□□□□ -0.15
SHPRH-211ENST00000629427 GAS2L2Q8NHY3 880 aa14.08□□□□□ -0.15
SHPRH-211ENST00000629427 MTHFSP49914 203 aa14.08□□□□□ -0.16
SHPRH-211ENST00000629427 RDXP35241 583 aaKnown RBP14.08□□□□□ -0.16
SHPRH-211ENST00000629427 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.16
SHPRH-211ENST00000629427 DDX54Q8TDD1 881 aaKnown RBP14.08□□□□□ -0.16
SHPRH-211ENST00000629427 KRT18P05783 430 aaKnown RBP14.07□□□□□ -0.16
SHPRH-211ENST00000629427 TXLNAP40222 546 aa14.07□□□□□ -0.16
SHPRH-211ENST00000629427 SYCP1Q15431 976 aa14.07□□□□□ -0.16
SHPRH-211ENST00000629427 MAGEC2Q9UBF1 373 aaPredicted RBP14.07□□□□□ -0.16
SHPRH-211ENST00000629427 CABP4P57796 275 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms