RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
CCDC163-204ENST00000628293 PIP4K2BP78356 416 aa11.42□□□□□ -0.58
CCDC163-204ENST00000628293 NEUROD1Q13562 356 aa11.42□□□□□ -0.58
CCDC163-204ENST00000628293 C19orf44Q9H6X5 657 aa11.42□□□□□ -0.58
CCDC163-204ENST00000628293 STK26Q9P289 416 aa11.41□□□□□ -0.58
CCDC163-204ENST00000628293 COL16A1Q07092 1604 aaPredicted RBP11.41□□□□□ -0.58
CCDC163-204ENST00000628293 PHLPP1O60346 1717 aa11.4□□□□□ -0.58
CCDC163-204ENST00000628293 AHDC1Q5TGY3 1603 aaPredicted RBP11.4□□□□□ -0.58
CCDC163-204ENST00000628293 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
CCDC163-204ENST00000628293 WAPLQ7Z5K2 1190 aa11.4□□□□□ -0.58
CCDC163-204ENST00000628293 C14orf37Q86TY3 774 aa11.39□□□□□ -0.59
CCDC163-204ENST00000628293 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
CCDC163-204ENST00000628293 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
CCDC163-204ENST00000628293 HSPA1LP34931 641 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
CCDC163-204ENST00000628293 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 CADPS2Q86UW7 1296 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 SLAIN2Q9P270 581 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
CCDC163-204ENST00000628293 NBPF8Q3BBV2 869 aa11.37□□□□□ -0.59
CCDC163-204ENST00000628293 ATF3P18847 181 aa11.36□□□□□ -0.59
CCDC163-204ENST00000628293 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
CCDC163-204ENST00000628293 TONSLQ96HA7 1378 aa11.36□□□□□ -0.59
CCDC163-204ENST00000628293 RALGAPBQ86X10 1494 aa11.36□□□□□ -0.59
CCDC163-204ENST00000628293 CLSPNQ9HAW4 1339 aa11.35□□□□□ -0.59
CCDC163-204ENST00000628293 PRAM1Q96QH2 718 aa11.35□□□□□ -0.59
CCDC163-204ENST00000628293 TRAK1Q9UPV9 953 aa11.35□□□□□ -0.59
CCDC163-204ENST00000628293 KIF1AQ12756 1690 aa11.34□□□□□ -0.59
CCDC163-204ENST00000628293 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
CCDC163-204ENST00000628293 TOPAZ1Q8N9V7 1692 aa11.34□□□□□ -0.59
CCDC163-204ENST00000628293 BRINP3Q76B58 766 aa11.34□□□□□ -0.59
CCDC163-204ENST00000628293 ITSN1Q15811 1721 aa11.33□□□□□ -0.6
CCDC163-204ENST00000628293 TULP4Q9NRJ4 1543 aa11.32□□□□□ -0.6
CCDC163-204ENST00000628293 SAFB2Q14151 953 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC163-204ENST00000628293 MED1Q15648 1581 aaPredicted RBP11.32□□□□□ -0.6
CCDC163-204ENST00000628293 ROCK2O75116 1388 aaKnown RBP11.31□□□□□ -0.6
CCDC163-204ENST00000628293 ATP7BP35670 1465 aa11.31□□□□□ -0.6
CCDC163-204ENST00000628293 ORAI2Q96SN7 254 aa11.3□□□□□ -0.6
CCDC163-204ENST00000628293 POGKQ9P215 609 aa11.3□□□□□ -0.6
CCDC163-204ENST00000628293 PXDNQ92626 1479 aa11.3□□□□□ -0.6
CCDC163-204ENST00000628293 MINK1Q8N4C8 1332 aaPredicted RBP11.3□□□□□ -0.6
CCDC163-204ENST00000628293 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
CCDC163-204ENST00000628293 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
CCDC163-204ENST00000628293 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
CCDC163-204ENST00000628293 TRPM3Q9HCF6 1732 aaPredicted RBP11.29□□□□□ -0.6
CCDC163-204ENST00000628293 COL22A1Q8NFW1 1626 aaPredicted RBP11.28□□□□□ -0.6
CCDC163-204ENST00000628293 NUTM2FA1L443 756 aa11.28□□□□□ -0.6
CCDC163-204ENST00000628293 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
CCDC163-204ENST00000628293 CACNB1Q02641 598 aaPredicted RBP11.27□□□□□ -0.61
CCDC163-204ENST00000628293 CCER1Q8TC90 406 aaPredicted RBP11.27□□□□□ -0.61
CCDC163-204ENST00000628293 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
CCDC163-204ENST00000628293 WASLO00401 505 aaPredicted RBP11.26□□□□□ -0.61
CCDC163-204ENST00000628293 LRP6O75581 1613 aa11.26□□□□□ -0.61
CCDC163-204ENST00000628293 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
CCDC163-204ENST00000628293 ABCA3Q99758 1704 aa11.26□□□□□ -0.61
CCDC163-204ENST00000628293 ALS2Q96Q42 1657 aa11.25□□□□□ -0.61
CCDC163-204ENST00000628293 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
CCDC163-204ENST00000628293 TIMELESSQ9UNS1 1208 aa11.25□□□□□ -0.61
CCDC163-204ENST00000628293 EIF3AQ14152 1382 aaKnown RBP11.25□□□□□ -0.61
CCDC163-204ENST00000628293 JCADQ9P266 1359 aa11.25□□□□□ -0.61
CCDC163-204ENST00000628293 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
CCDC163-204ENST00000628293 MARF1Q9Y4F3 1742 aaKnown RBP11.24□□□□□ -0.61
CCDC163-204ENST00000628293 CRYBG1Q9Y4K1 1723 aa11.24□□□□□ -0.61
CCDC163-204ENST00000628293 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
CCDC163-204ENST00000628293 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
CCDC163-204ENST00000628293 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
CCDC163-204ENST00000628293 FOXO3O43524 673 aa11.22□□□□□ -0.61
CCDC163-204ENST00000628293 NPHP3Q7Z494 1330 aa11.22□□□□□ -0.61
CCDC163-204ENST00000628293 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
CCDC163-204ENST00000628293 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
CCDC163-204ENST00000628293 XPCQ01831 940 aaPredicted RBP11.21□□□□□ -0.61
CCDC163-204ENST00000628293 NUDT16Q96DE0 195 aaKnown RBP11.2□□□□□ -0.62
CCDC163-204ENST00000628293 MON2Q7Z3U7 1717 aa11.2□□□□□ -0.62
CCDC163-204ENST00000628293 NRKQ7Z2Y5 1582 aa11.2□□□□□ -0.62
CCDC163-204ENST00000628293 TNS3Q68CZ2 1445 aa11.19□□□□□ -0.62
CCDC163-204ENST00000628293 POLR3AO14802 1390 aaPredicted RBP11.19□□□□□ -0.62
CCDC163-204ENST00000628293 USP47Q96K76 1375 aa11.19□□□□□ -0.62
CCDC163-204ENST00000628293 SPATA31A6Q5VVP1 1343 aa11.19□□□□□ -0.62
CCDC163-204ENST00000628293 PMFBP1Q8TBY8 1022 aa11.19□□□□□ -0.62
CCDC163-204ENST00000628293 LRRC59Q96AG4 307 aaKnown RBP11.19□□□□□ -0.62
CCDC163-204ENST00000628293 PPIP5K1Q6PFW1 1433 aa11.18□□□□□ -0.62
CCDC163-204ENST00000628293 TESK2Q96S53 571 aa11.18□□□□□ -0.62
CCDC163-204ENST00000628293 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
CCDC163-204ENST00000628293 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
CCDC163-204ENST00000628293 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
CCDC163-204ENST00000628293 SPATA31A3Q5VYP0 1347 aa11.17□□□□□ -0.62
CCDC163-204ENST00000628293 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
CCDC163-204ENST00000628293 CCDC61Q9Y6R9 512 aa11.17□□□□□ -0.62
CCDC163-204ENST00000628293 MYOM1P52179 1685 aa11.17□□□□□ -0.62
CCDC163-204ENST00000628293 EVC2Q86UK5 1308 aa11.16□□□□□ -0.62
CCDC163-204ENST00000628293 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
CCDC163-204ENST00000628293 PLEKHG3A1L390 1219 aa11.16□□□□□ -0.62
CCDC163-204ENST00000628293 SRPK2P78362 688 aaKnown RBP11.16□□□□□ -0.62
CCDC163-204ENST00000628293 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
CCDC163-204ENST00000628293 PIK3C2AO00443 1686 aa11.16□□□□□ -0.62
CCDC163-204ENST00000628293 CD163L1Q9NR16 1453 aa11.15□□□□□ -0.62
CCDC163-204ENST00000628293 RGS17Q9UGC6 210 aaPredicted RBP11.15□□□□□ -0.62
CCDC163-204ENST00000628293 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
CCDC163-204ENST00000628293 ACEP12821 1306 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms