RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
TCF4-262ENST00000628078 SOS2Q07890 1332 aaPredicted RBP20.16■□□□□ 0.82
TCF4-262ENST00000628078 CCDC144AA2RUR9 1427 aa20.15■□□□□ 0.82
TCF4-262ENST00000628078 FOXO3O43524 673 aa20.14■□□□□ 0.81
TCF4-262ENST00000628078 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.81
TCF4-262ENST00000628078 USP21Q9UK80 565 aa20.13■□□□□ 0.81
TCF4-262ENST00000628078 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
TCF4-262ENST00000628078 RGS12O14924 1447 aa20.11■□□□□ 0.81
TCF4-262ENST00000628078 PLEKHG5O94827 1062 aa20.1■□□□□ 0.81
TCF4-262ENST00000628078 SPATA31E1Q6ZUB1 1445 aa20.1■□□□□ 0.81
TCF4-262ENST00000628078 LAMC1P11047 1609 aa20.09■□□□□ 0.81
TCF4-262ENST00000628078 CDK12Q9NYV4 1490 aaPredicted RBP20.08■□□□□ 0.81
TCF4-262ENST00000628078 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
TCF4-262ENST00000628078 NPHP3Q7Z494 1330 aa20.07■□□□□ 0.8
TCF4-262ENST00000628078 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
TCF4-262ENST00000628078 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
TCF4-262ENST00000628078 PRAG1Q86YV5 1406 aa20.06■□□□□ 0.8
TCF4-262ENST00000628078 ANKRD30BQ9BXX2 1392 aa20.06■□□□□ 0.8
TCF4-262ENST00000628078 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
TCF4-262ENST00000628078 TRPC5Q9UL62 973 aaPredicted RBP20.05■□□□□ 0.8
TCF4-262ENST00000628078 CDC42BPGQ6DT37 1551 aa20.04■□□□□ 0.8
TCF4-262ENST00000628078 PXDNQ92626 1479 aa20.04■□□□□ 0.8
TCF4-262ENST00000628078 FNBP4Q8N3X1 1017 aaPredicted RBP20.03■□□□□ 0.8
TCF4-262ENST00000628078 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
TCF4-262ENST00000628078 PIK3C2GO75747 1445 aa20.02■□□□□ 0.79
TCF4-262ENST00000628078 YTHDC2Q9H6S0 1430 aaKnown RBP20.02■□□□□ 0.79
TCF4-262ENST00000628078 RGPD8O14715 1765 aaPredicted RBP20.01■□□□□ 0.79
TCF4-262ENST00000628078 COL22A1Q8NFW1 1626 aaPredicted RBP20.01■□□□□ 0.79
TCF4-262ENST00000628078 KRT28Q7Z3Y7 464 aa20■□□□□ 0.79
TCF4-262ENST00000628078 C14orf93Q9H972 538 aaKnown RBP20■□□□□ 0.79
TCF4-262ENST00000628078 TECPR2O15040 1411 aa20■□□□□ 0.79
TCF4-262ENST00000628078 MYOM2P54296 1465 aa19.99■□□□□ 0.79
TCF4-262ENST00000628078 CABLES1Q8TDN4 633 aa19.98■□□□□ 0.79
TCF4-262ENST00000628078 KNDC1Q76NI1 1749 aa19.98■□□□□ 0.79
TCF4-262ENST00000628078 FMN2Q9NZ56 1722 aa19.98■□□□□ 0.79
TCF4-262ENST00000628078 ATRNO75882 1429 aa19.97■□□□□ 0.79
TCF4-262ENST00000628078 LMOD2Q6P5Q4 547 aa19.97■□□□□ 0.79
TCF4-262ENST00000628078 PRAM1Q96QH2 718 aa19.97■□□□□ 0.79
TCF4-262ENST00000628078 KDM2AQ9Y2K7 1162 aa19.97■□□□□ 0.79
TCF4-262ENST00000628078 BCL9LQ86UU0 1499 aa19.97■□□□□ 0.79
TCF4-262ENST00000628078 MARF1Q9Y4F3 1742 aaKnown RBP19.96■□□□□ 0.79
TCF4-262ENST00000628078 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
TCF4-262ENST00000628078 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
TCF4-262ENST00000628078 HAP1P54257 671 aaPredicted RBP19.95■□□□□ 0.78
TCF4-262ENST00000628078 POGKQ9P215 609 aa19.95■□□□□ 0.78
TCF4-262ENST00000628078 PHF8Q9UPP1 1060 aa19.95■□□□□ 0.78
TCF4-262ENST00000628078 ATAD2Q6PL18 1390 aa19.95■□□□□ 0.78
TCF4-262ENST00000628078 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
TCF4-262ENST00000628078 GJD4Q96KN9 370 aaPredicted RBP19.94■□□□□ 0.78
TCF4-262ENST00000628078 RAB3GAP2Q9H2M9 1393 aa19.94■□□□□ 0.78
TCF4-262ENST00000628078 HIRIP3Q9BW71 556 aaPredicted RBP19.93■□□□□ 0.78
TCF4-262ENST00000628078 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
TCF4-262ENST00000628078 PSME1Q06323 249 aa19.92■□□□□ 0.78
TCF4-262ENST00000628078 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
TCF4-262ENST00000628078 UNC5CLQ8IV45 518 aa19.9■□□□□ 0.78
TCF4-262ENST00000628078 KIF1AQ12756 1690 aa19.9■□□□□ 0.78
TCF4-262ENST00000628078 DCAF11Q8TEB1 546 aa19.89■□□□□ 0.77
TCF4-262ENST00000628078 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
TCF4-262ENST00000628078 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
TCF4-262ENST00000628078 CCDC9Q9Y3X0 531 aaKnown RBP19.88■□□□□ 0.77
TCF4-262ENST00000628078 RALGAPBQ86X10 1494 aa19.85■□□□□ 0.77
TCF4-262ENST00000628078 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
TCF4-262ENST00000628078 GLI3P10071 1580 aa19.84■□□□□ 0.77
TCF4-262ENST00000628078 SLIT2O94813 1529 aa19.84■□□□□ 0.77
TCF4-262ENST00000628078 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
TCF4-262ENST00000628078 ACIN1Q9UKV3 1341 aaKnown RBP19.83■□□□□ 0.77
TCF4-262ENST00000628078 BRWD3Q6RI45 1802 aa19.83■□□□□ 0.76
TCF4-262ENST00000628078 FAM83GA6ND36 823 aa19.82■□□□□ 0.76
TCF4-262ENST00000628078 SEPT12Q8IYM1 358 aa19.81■□□□□ 0.76
TCF4-262ENST00000628078 ZRANB1Q9UGI0 708 aa19.81■□□□□ 0.76
TCF4-262ENST00000628078 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.81■□□□□ 0.76
TCF4-262ENST00000628078 PRR36Q9H6K5 1346 aa19.8■□□□□ 0.76
TCF4-262ENST00000628078 ADGRB1O14514 1584 aa19.79■□□□□ 0.76
TCF4-262ENST00000628078 A0A0G2JS52 829 aa19.79■□□□□ 0.76
TCF4-262ENST00000628078 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
TCF4-262ENST00000628078 MYT1Q01538 1121 aa19.79■□□□□ 0.76
TCF4-262ENST00000628078 DEFB132Q7Z7B7 95 aa19.79■□□□□ 0.76
TCF4-262ENST00000628078 SBNO1A3KN83 1393 aa19.79■□□□□ 0.76
TCF4-262ENST00000628078 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
TCF4-262ENST00000628078 DLC1Q96QB1 1528 aa19.78■□□□□ 0.76
TCF4-262ENST00000628078 VPS72Q15906 364 aa19.78■□□□□ 0.76
TCF4-262ENST00000628078 ABCA3Q99758 1704 aa19.77■□□□□ 0.76
TCF4-262ENST00000628078 WASLO00401 505 aaPredicted RBP19.77■□□□□ 0.76
TCF4-262ENST00000628078 CCDC125Q86Z20 511 aa19.77■□□□□ 0.76
TCF4-262ENST00000628078 ARHGEF10O15013 1369 aa19.76■□□□□ 0.75
TCF4-262ENST00000628078 NGDNQ8NEJ9 315 aaKnown RBP19.76■□□□□ 0.75
TCF4-262ENST00000628078 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
TCF4-262ENST00000628078 ANKARQ7Z5J8 1434 aa19.76■□□□□ 0.75
TCF4-262ENST00000628078 GPRASP1Q5JY77 1395 aa19.75■□□□□ 0.75
TCF4-262ENST00000628078 EP400Q96L91 3159 aa19.74■□□□□ 0.75
TCF4-262ENST00000628078 FAM98CQ17RN3 349 aaKnown RBP19.74■□□□□ 0.75
TCF4-262ENST00000628078 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
TCF4-262ENST00000628078 ADGRB2O60241 1585 aa19.72■□□□□ 0.75
TCF4-262ENST00000628078 SF3B2Q13435 895 aaKnown RBP19.72■□□□□ 0.75
TCF4-262ENST00000628078 FAM182BQ5T319 152 aa19.72■□□□□ 0.75
TCF4-262ENST00000628078 NUTM2GQ5VZR2 741 aa19.72■□□□□ 0.75
TCF4-262ENST00000628078 KRT27Q7Z3Y8 459 aa19.72■□□□□ 0.75
TCF4-262ENST00000628078 NWD2Q9ULI1 1742 aa19.71■□□□□ 0.75
TCF4-262ENST00000628078 BLMP54132 1417 aaPredicted RBP19.71■□□□□ 0.75
TCF4-262ENST00000628078 ONECUT3O60422 494 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms