RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 DLC1Q96QB1 1528 aa12.04□□□□□ -0.48
SGMS1-211ENST00000626236 EIF3AQ14152 1382 aaKnown RBP12.04□□□□□ -0.48
SGMS1-211ENST00000626236 USP47Q96K76 1375 aa12.04□□□□□ -0.48
SGMS1-211ENST00000626236 TECPR2O15040 1411 aa12.03□□□□□ -0.48
SGMS1-211ENST00000626236 KCNA6P17658 529 aa12.03□□□□□ -0.48
SGMS1-211ENST00000626236 ZNF335Q9H4Z2 1342 aaPredicted RBP12.03□□□□□ -0.48
SGMS1-211ENST00000626236 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
SGMS1-211ENST00000626236 PTCH1Q13635 1447 aa12.03□□□□□ -0.48
SGMS1-211ENST00000626236 NKTRP30414 1462 aaKnown RBP12.02□□□□□ -0.48
SGMS1-211ENST00000626236 ROBO2Q9HCK4 1378 aa12.02□□□□□ -0.49
SGMS1-211ENST00000626236 XIRP1Q702N8 1843 aaKnown RBP12.01□□□□□ -0.49
SGMS1-211ENST00000626236 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
SGMS1-211ENST00000626236 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
SGMS1-211ENST00000626236 PRAM1Q96QH2 718 aa12□□□□□ -0.49
SGMS1-211ENST00000626236 POGKQ9P215 609 aa12□□□□□ -0.49
SGMS1-211ENST00000626236 PLEKHH1Q9ULM0 1364 aa12□□□□□ -0.49
SGMS1-211ENST00000626236 FAM135BQ49AJ0 1406 aa12□□□□□ -0.49
SGMS1-211ENST00000626236 SIPA1L2Q9P2F8 1722 aaPredicted RBP12□□□□□ -0.49
SGMS1-211ENST00000626236 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
SGMS1-211ENST00000626236 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
SGMS1-211ENST00000626236 WAPLQ7Z5K2 1190 aa11.99□□□□□ -0.49
SGMS1-211ENST00000626236 CENPJQ9HC77 1338 aaPredicted RBP11.99□□□□□ -0.49
SGMS1-211ENST00000626236 ST20-MTHFSA0A0A6YYL1 179 aa11.98□□□□□ -0.49
SGMS1-211ENST00000626236 PROSER2Q86WR7 435 aaPredicted RBP11.98□□□□□ -0.49
SGMS1-211ENST00000626236 SIRT1Q96EB6 747 aa11.98□□□□□ -0.49
SGMS1-211ENST00000626236 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
SGMS1-211ENST00000626236 LTBP4Q8N2S1 1624 aa11.97□□□□□ -0.49
SGMS1-211ENST00000626236 LRRC7Q96NW7 1537 aa11.97□□□□□ -0.49
SGMS1-211ENST00000626236 ATXN8OSP0DMR3 200 aa11.97□□□□□ -0.49
SGMS1-211ENST00000626236 HIRIP3Q9BW71 556 aaPredicted RBP11.97□□□□□ -0.49
SGMS1-211ENST00000626236 ADGRB2O60241 1585 aa11.96□□□□□ -0.5
SGMS1-211ENST00000626236 TMEM94Q12767 1356 aa11.95□□□□□ -0.5
SGMS1-211ENST00000626236 MINK1Q8N4C8 1332 aaPredicted RBP11.95□□□□□ -0.5
SGMS1-211ENST00000626236 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
SGMS1-211ENST00000626236 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
SGMS1-211ENST00000626236 CDC42BPGQ6DT37 1551 aa11.93□□□□□ -0.5
SGMS1-211ENST00000626236 TULP4Q9NRJ4 1543 aa11.93□□□□□ -0.5
SGMS1-211ENST00000626236 TESK2Q96S53 571 aa11.93□□□□□ -0.5
SGMS1-211ENST00000626236 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
SGMS1-211ENST00000626236 SBNO2Q9Y2G9 1366 aa11.92□□□□□ -0.5
SGMS1-211ENST00000626236 FMN2Q9NZ56 1722 aa11.92□□□□□ -0.5
SGMS1-211ENST00000626236 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-211ENST00000626236 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-211ENST00000626236 MSH6P52701 1360 aa11.91□□□□□ -0.5
SGMS1-211ENST00000626236 DISP3Q9P2K9 1392 aa11.91□□□□□ -0.5
SGMS1-211ENST00000626236 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
SGMS1-211ENST00000626236 ABCB7O75027 752 aa11.9□□□□□ -0.5
SGMS1-211ENST00000626236 TMF1P82094 1093 aa11.9□□□□□ -0.5
SGMS1-211ENST00000626236 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
SGMS1-211ENST00000626236 WASLO00401 505 aaPredicted RBP11.89□□□□□ -0.51
SGMS1-211ENST00000626236 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
SGMS1-211ENST00000626236 C19orf44Q9H6X5 657 aa11.89□□□□□ -0.51
SGMS1-211ENST00000626236 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
SGMS1-211ENST00000626236 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
SGMS1-211ENST00000626236 DCCP43146 1447 aa11.88□□□□□ -0.51
SGMS1-211ENST00000626236 SRPK2P78362 688 aaKnown RBP11.88□□□□□ -0.51
SGMS1-211ENST00000626236 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
SGMS1-211ENST00000626236 NUTM2FA1L443 756 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 ATF3P18847 181 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 DSG3P32926 999 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 POLR3GLQ9BT43 218 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 CABP2Q9NPB3 220 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 MYOM1P52179 1685 aa11.87□□□□□ -0.51
SGMS1-211ENST00000626236 C11orf95C9JLR9 678 aaPredicted RBP11.86□□□□□ -0.51
SGMS1-211ENST00000626236 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
SGMS1-211ENST00000626236 ATP7BP35670 1465 aa11.85□□□□□ -0.51
SGMS1-211ENST00000626236 IQSEC2Q5JU85 1478 aa11.85□□□□□ -0.51
SGMS1-211ENST00000626236 CADPS2Q86UW7 1296 aa11.85□□□□□ -0.51
SGMS1-211ENST00000626236 MST1RQ04912 1400 aa11.85□□□□□ -0.51
SGMS1-211ENST00000626236 KIF7Q2M1P5 1343 aa11.85□□□□□ -0.51
SGMS1-211ENST00000626236 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
SGMS1-211ENST00000626236 CERKQ8TCT0 537 aa11.84□□□□□ -0.51
SGMS1-211ENST00000626236 ANKARQ7Z5J8 1434 aa11.84□□□□□ -0.51
SGMS1-211ENST00000626236 C1orf167Q5SNV9 1468 aa11.83□□□□□ -0.52
SGMS1-211ENST00000626236 ATAD2Q6PL18 1390 aa11.83□□□□□ -0.52
SGMS1-211ENST00000626236 CCDC7Q96M83 1385 aa11.83□□□□□ -0.52
SGMS1-211ENST00000626236 NUDT16Q96DE0 195 aaKnown RBP11.83□□□□□ -0.52
SGMS1-211ENST00000626236 WASHC2AQ641Q2 1341 aa11.83□□□□□ -0.52
SGMS1-211ENST00000626236 PRR36Q9H6K5 1346 aa11.83□□□□□ -0.52
SGMS1-211ENST00000626236 KIF1AQ12756 1690 aa11.82□□□□□ -0.52
SGMS1-211ENST00000626236 POLA2Q14181 598 aa11.82□□□□□ -0.52
SGMS1-211ENST00000626236 TMC1Q8TDI8 760 aa11.82□□□□□ -0.52
SGMS1-211ENST00000626236 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
SGMS1-211ENST00000626236 PPIP5K1Q6PFW1 1433 aa11.82□□□□□ -0.52
SGMS1-211ENST00000626236 AKAP12Q02952 1782 aa11.82□□□□□ -0.52
SGMS1-211ENST00000626236 ROBO1Q9Y6N7 1651 aa11.81□□□□□ -0.52
SGMS1-211ENST00000626236 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
SGMS1-211ENST00000626236 SLAIN2Q9P270 581 aa11.8□□□□□ -0.52
SGMS1-211ENST00000626236 CCDC61Q9Y6R9 512 aa11.8□□□□□ -0.52
SGMS1-211ENST00000626236 ORAI2Q96SN7 254 aa11.79□□□□□ -0.52
SGMS1-211ENST00000626236 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
SGMS1-211ENST00000626236 MON2Q7Z3U7 1717 aa11.79□□□□□ -0.52
SGMS1-211ENST00000626236 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
SGMS1-211ENST00000626236 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
SGMS1-211ENST00000626236 TOM1O60784 492 aa11.78□□□□□ -0.52
SGMS1-211ENST00000626236 PMFBP1Q8TBY8 1022 aa11.78□□□□□ -0.52
SGMS1-211ENST00000626236 SLC12A5Q9H2X9 1139 aa11.78□□□□□ -0.52
SGMS1-211ENST00000626236 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
SGMS1-211ENST00000626236 NHSL1Q5SYE7 1610 aa11.77□□□□□ -0.53
SGMS1-211ENST00000626236 CD163L1Q9NR16 1453 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms