RNA–Protein interactions for RNA: ENST00000625668.2

LINC02028-223, Transcript of long intergenic non-protein coding RNA 2028, human

TSL 5

Gene LINC02028, Length 646 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC02028-223	ENST00000625668	CEP170	Q5SW79	1584 aa		11.45	□□□□□ -0.58
LINC02028-223	ENST00000625668	NUP160	Q12769	1436 aa		11.44	□□□□□ -0.58
LINC02028-223	ENST00000625668	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.44	□□□□□ -0.58
LINC02028-223	ENST00000625668	SLC10A3	P09131	477 aa		11.44	□□□□□ -0.58
LINC02028-223	ENST00000625668	CYB5RL	Q6IPT4	315 aa		11.44	□□□□□ -0.58
LINC02028-223	ENST00000625668	TLL1	O43897	1013 aa		11.43	□□□□□ -0.58
LINC02028-223	ENST00000625668	CFH	P08603	1231 aa		11.43	□□□□□ -0.58
LINC02028-223	ENST00000625668	EMID1	Q96A84	441 aa	Predicted RBP	11.43	□□□□□ -0.58
LINC02028-223	ENST00000625668	PXYLP1	Q8TE99	480 aa		11.42	□□□□□ -0.58
LINC02028-223	ENST00000625668	CARMIL1	Q5VZK9	1371 aa		11.41	□□□□□ -0.58
LINC02028-223	ENST00000625668	OAT	P04181	439 aa		11.41	□□□□□ -0.58
LINC02028-223	ENST00000625668	SLC19A1	P41440	591 aa		11.4	□□□□□ -0.58
LINC02028-223	ENST00000625668	TRIM67	Q6ZTA4	783 aa		11.4	□□□□□ -0.58
LINC02028-223	ENST00000625668	ANKLE1	Q8NAG6	615 aa		11.4	□□□□□ -0.58
LINC02028-223	ENST00000625668	ARAP1	Q96P48	1450 aa		11.39	□□□□□ -0.59
LINC02028-223	ENST00000625668	HIC1	Q14526	733 aa		11.39	□□□□□ -0.59
LINC02028-223	ENST00000625668	TESPA1	A2RU30	521 aa	Predicted RBP	11.37	□□□□□ -0.59
LINC02028-223	ENST00000625668	S1PR4	O95977	384 aa		11.37	□□□□□ -0.59
LINC02028-223	ENST00000625668	SPRYD7	Q5W111	196 aa		11.37	□□□□□ -0.59
LINC02028-223	ENST00000625668	METTL3	Q86U44	580 aa	Known RBP	11.37	□□□□□ -0.59
LINC02028-223	ENST00000625668	RAPGEF2	Q9Y4G8	1499 aa		11.37	□□□□□ -0.59
LINC02028-223	ENST00000625668	PRX	Q9BXM0	1461 aa		11.36	□□□□□ -0.59
LINC02028-223	ENST00000625668	EEA1	Q15075	1411 aa		11.35	□□□□□ -0.59
LINC02028-223	ENST00000625668	PPEF1	O14829	653 aa	Predicted RBP	11.35	□□□□□ -0.59
LINC02028-223	ENST00000625668	NR1I2	O75469	434 aa		11.35	□□□□□ -0.59
LINC02028-223	ENST00000625668	ADH1B	P00325	375 aa		11.35	□□□□□ -0.59
LINC02028-223	ENST00000625668	SHROOM2	Q13796	1616 aa		11.35	□□□□□ -0.59
LINC02028-223	ENST00000625668	RBM26	Q5T8P6	1007 aa	Known RBP	11.34	□□□□□ -0.59
LINC02028-223	ENST00000625668	ZNF598	Q86UK7	904 aa	Known RBP	11.34	□□□□□ -0.59
LINC02028-223	ENST00000625668	KIAA0586	Q9BVV6	1533 aa		11.34	□□□□□ -0.59
LINC02028-223	ENST00000625668	LIAT1	Q6ZQX7	453 aa		11.33	□□□□□ -0.6
LINC02028-223	ENST00000625668	SCUBE3	Q8IX30	993 aa		11.33	□□□□□ -0.6
LINC02028-223	ENST00000625668	ERCC6L2	Q5T890	1561 aa		11.33	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRR20E	P86478	221 aa		11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRR20C	P86479	221 aa		11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRR20D	P86480	221 aa		11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRR20B	P86481	221 aa		11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRR20A	P86496	221 aa		11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.32	□□□□□ -0.6
LINC02028-223	ENST00000625668	GNPAT	O15228	680 aa		11.31	□□□□□ -0.6
LINC02028-223	ENST00000625668	GPR37	O15354	613 aa		11.31	□□□□□ -0.6
LINC02028-223	ENST00000625668	FECH	P22830	423 aa		11.31	□□□□□ -0.6
LINC02028-223	ENST00000625668	RSPH4A	Q5TD94	716 aa		11.31	□□□□□ -0.6
LINC02028-223	ENST00000625668	PRG4	Q92954	1404 aa	Predicted RBP	11.3	□□□□□ -0.6
LINC02028-223	ENST00000625668	SMYD5	Q6GMV2	418 aa		11.3	□□□□□ -0.6
LINC02028-223	ENST00000625668	SLC6A16	Q9GZN6	736 aa		11.3	□□□□□ -0.6
LINC02028-223	ENST00000625668	IQGAP2	Q13576	1575 aa		11.29	□□□□□ -0.6
LINC02028-223	ENST00000625668	PUS10	Q3MIT2	529 aa	Known RBP	11.29	□□□□□ -0.6
LINC02028-223	ENST00000625668	ZNF787	Q6DD87	383 aa		11.29	□□□□□ -0.6
LINC02028-223	ENST00000625668	PLCB2	Q00722	1185 aa		11.28	□□□□□ -0.6
LINC02028-223	ENST00000625668	DAXX	Q9UER7	740 aa	Predicted RBP	11.28	□□□□□ -0.6
LINC02028-223	ENST00000625668	PLA2G2C	Q5R387	149 aa		11.27	□□□□□ -0.61
LINC02028-223	ENST00000625668	ZNF697	Q5TEC3	545 aa		11.27	□□□□□ -0.61
LINC02028-223	ENST00000625668	GDF9	O60383	454 aa		11.26	□□□□□ -0.61
LINC02028-223	ENST00000625668	DGAT1	O75907	488 aa		11.26	□□□□□ -0.61
LINC02028-223	ENST00000625668	SPSB2	Q99619	263 aa		11.26	□□□□□ -0.61
LINC02028-223	ENST00000625668	KIF21B	O75037	1637 aa		11.25	□□□□□ -0.61
LINC02028-223	ENST00000625668	MYT1	Q01538	1121 aa		11.24	□□□□□ -0.61
LINC02028-223	ENST00000625668	PKDCC	Q504Y2	493 aa		11.24	□□□□□ -0.61
LINC02028-223	ENST00000625668	MORN1	Q5T089	497 aa		11.23	□□□□□ -0.61
LINC02028-223	ENST00000625668	UGGT2	Q9NYU1	1516 aa		11.23	□□□□□ -0.61
LINC02028-223	ENST00000625668	CTTNBP2	Q8WZ74	1663 aa		11.23	□□□□□ -0.61
LINC02028-223	ENST00000625668	THAP11	Q96EK4	314 aa		11.22	□□□□□ -0.61
LINC02028-223	ENST00000625668	DISP1	Q96F81	1524 aa		11.22	□□□□□ -0.61
LINC02028-223	ENST00000625668	CARMIL2	Q6F5E8	1435 aa		11.21	□□□□□ -0.61
LINC02028-223	ENST00000625668	FUT2	Q10981	343 aa		11.21	□□□□□ -0.61
LINC02028-223	ENST00000625668	RDH13	Q8NBN7	331 aa		11.21	□□□□□ -0.61
LINC02028-223	ENST00000625668	PHOX2B	Q99453	314 aa		11.21	□□□□□ -0.61
LINC02028-223	ENST00000625668	GOLGA3	Q08378	1498 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	DDX11L8	A8MPP1	907 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	TNFRSF10A	O00220	468 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	ATP6V1A	P38606	617 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	NLRP7	Q8WX94	980 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	KIAA0556	O60303	1618 aa		11.2	□□□□□ -0.62
LINC02028-223	ENST00000625668	GCGR	P47871	477 aa		11.19	□□□□□ -0.62
LINC02028-223	ENST00000625668	TNIK	Q9UKE5	1360 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	FAM187A	A6NFU0	413 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	RPIA	P49247	311 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	LMOD2	Q6P5Q4	547 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	SULF1	Q8IWU6	871 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	ZNF775	Q96BV0	537 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	PKD2L1	Q9P0L9	805 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	SLC27A5	Q9Y2P5	690 aa		11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	SALL2	Q9Y467	1007 aa	Predicted RBP	11.17	□□□□□ -0.62
LINC02028-223	ENST00000625668	FAM160A2	Q8N612	972 aa	Predicted RBP	11.16	□□□□□ -0.62
LINC02028-223	ENST00000625668	PTPRG	P23470	1445 aa		11.16	□□□□□ -0.62
LINC02028-223	ENST00000625668	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.15	□□□□□ -0.62
LINC02028-223	ENST00000625668	FMNL1	O95466	1100 aa	Predicted RBP	11.14	□□□□□ -0.63
LINC02028-223	ENST00000625668	FCF1	Q9Y324	198 aa	Known RBP	11.14	□□□□□ -0.63
LINC02028-223	ENST00000625668	SAMD9	Q5K651	1589 aa		11.14	□□□□□ -0.63
LINC02028-223	ENST00000625668	POTEC	B2RU33	542 aa		11.13	□□□□□ -0.63
LINC02028-223	ENST00000625668	BRICD5	Q6PL45	260 aa		11.13	□□□□□ -0.63
LINC02028-223	ENST00000625668	GPIHBP1	Q8IV16	184 aa		11.13	□□□□□ -0.63
LINC02028-223	ENST00000625668	ADCY10	Q96PN6	1610 aa		11.13	□□□□□ -0.63
LINC02028-223	ENST00000625668	UBTF	P17480	764 aa	Known RBP	11.12	□□□□□ -0.63
LINC02028-223	ENST00000625668	RANGAP1	P46060	587 aa	Predicted RBP	11.12	□□□□□ -0.63
LINC02028-223	ENST00000625668	CD2BP2	O95400	341 aa	Known RBP	11.1	□□□□□ -0.63
LINC02028-223	ENST00000625668	FOXC1	Q12948	553 aa		11.1	□□□□□ -0.63
LINC02028-223	ENST00000625668	AAAS	Q9NRG9	546 aa		11.1	□□□□□ -0.63
LINC02028-223	ENST00000625668	UACA	Q9BZF9	1416 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms