RNA–Protein interactions for RNA: ENST00000624534.1

SMIM11B-206, Transcript of small integral membrane protein 11B, humanhuman

TSL 4

Gene SMIM11B, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-206ENST00000624534 WAPLQ7Z5K2 1190 aa22.02■■□□□ 1.12
SMIM11B-206ENST00000624534 CADPS2Q86UW7 1296 aa22.02■■□□□ 1.12
SMIM11B-206ENST00000624534 PRAM1Q96QH2 718 aa22.02■■□□□ 1.12
SMIM11B-206ENST00000624534 EIF3AQ14152 1382 aaKnown RBP22.01■■□□□ 1.11
SMIM11B-206ENST00000624534 CDC42BPGQ6DT37 1551 aa22.01■■□□□ 1.11
SMIM11B-206ENST00000624534 ATF3P18847 181 aa22.01■■□□□ 1.11
SMIM11B-206ENST00000624534 PLEKHH1Q9ULM0 1364 aa22■■□□□ 1.11
SMIM11B-206ENST00000624534 FBXO41Q8TF61 875 aa22■■□□□ 1.11
SMIM11B-206ENST00000624534 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
SMIM11B-206ENST00000624534 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
SMIM11B-206ENST00000624534 QRICH2Q9H0J4 1663 aa21.96■■□□□ 1.11
SMIM11B-206ENST00000624534 CENPJQ9HC77 1338 aaPredicted RBP21.96■■□□□ 1.11
SMIM11B-206ENST00000624534 FMN2Q9NZ56 1722 aa21.94■■□□□ 1.1
SMIM11B-206ENST00000624534 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
SMIM11B-206ENST00000624534 SLAIN2Q9P270 581 aa21.93■■□□□ 1.1
SMIM11B-206ENST00000624534 MST1RQ04912 1400 aa21.92■■□□□ 1.1
SMIM11B-206ENST00000624534 MINK1Q8N4C8 1332 aaPredicted RBP21.9■■□□□ 1.1
SMIM11B-206ENST00000624534 ROBO1Q9Y6N7 1651 aa21.89■■□□□ 1.1
SMIM11B-206ENST00000624534 PIP4K2BP78356 416 aa21.89■■□□□ 1.09
SMIM11B-206ENST00000624534 SBNO2Q9Y2G9 1366 aa21.88■■□□□ 1.09
SMIM11B-206ENST00000624534 SCAF1Q9H7N4 1312 aaKnown RBP21.88■■□□□ 1.09
SMIM11B-206ENST00000624534 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
SMIM11B-206ENST00000624534 WASLO00401 505 aaPredicted RBP21.86■■□□□ 1.09
SMIM11B-206ENST00000624534 SLC24A1O60721 1099 aa21.86■■□□□ 1.09
SMIM11B-206ENST00000624534 HIRIP3Q9BW71 556 aaPredicted RBP21.86■■□□□ 1.09
SMIM11B-206ENST00000624534 ANKARQ7Z5J8 1434 aa21.86■■□□□ 1.09
SMIM11B-206ENST00000624534 USP47Q96K76 1375 aa21.86■■□□□ 1.09
SMIM11B-206ENST00000624534 RGPD8O14715 1765 aaPredicted RBP21.85■■□□□ 1.09
SMIM11B-206ENST00000624534 TULP4Q9NRJ4 1543 aa21.85■■□□□ 1.09
SMIM11B-206ENST00000624534 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
SMIM11B-206ENST00000624534 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
SMIM11B-206ENST00000624534 EVC2Q86UK5 1308 aa21.81■■□□□ 1.08
SMIM11B-206ENST00000624534 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
SMIM11B-206ENST00000624534 BRINP3Q76B58 766 aa21.8■■□□□ 1.08
SMIM11B-206ENST00000624534 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
SMIM11B-206ENST00000624534 ST20-MTHFSA0A0A6YYL1 179 aa21.79■■□□□ 1.08
SMIM11B-206ENST00000624534 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
SMIM11B-206ENST00000624534 AHDC1Q5TGY3 1603 aaPredicted RBP21.78■■□□□ 1.08
SMIM11B-206ENST00000624534 NUTM2FA1L443 756 aa21.78■■□□□ 1.08
SMIM11B-206ENST00000624534 PHLPP1O60346 1717 aa21.77■■□□□ 1.08
SMIM11B-206ENST00000624534 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
SMIM11B-206ENST00000624534 EIF4G2P78344 907 aaKnown RBP eCLIP21.77■■□□□ 1.08
SMIM11B-206ENST00000624534 ESCO1Q5FWF5 840 aa21.77■■□□□ 1.08
SMIM11B-206ENST00000624534 ATP7BP35670 1465 aa21.77■■□□□ 1.07
SMIM11B-206ENST00000624534 TOPAZ1Q8N9V7 1692 aa21.76■■□□□ 1.07
SMIM11B-206ENST00000624534 SRPK2P78362 688 aaKnown RBP21.76■■□□□ 1.07
SMIM11B-206ENST00000624534 ILDR1Q86SU0 546 aaPredicted RBP21.76■■□□□ 1.07
SMIM11B-206ENST00000624534 ORAI2Q96SN7 254 aa21.76■■□□□ 1.07
SMIM11B-206ENST00000624534 NUDT16Q96DE0 195 aaKnown RBP21.74■■□□□ 1.07
SMIM11B-206ENST00000624534 TESK2Q96S53 571 aa21.74■■□□□ 1.07
SMIM11B-206ENST00000624534 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
SMIM11B-206ENST00000624534 PRR36Q9H6K5 1346 aa21.73■■□□□ 1.07
SMIM11B-206ENST00000624534 PUS7Q96PZ0 661 aaKnown RBP21.72■■□□□ 1.07
SMIM11B-206ENST00000624534 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
SMIM11B-206ENST00000624534 NPHP3Q7Z494 1330 aa21.72■■□□□ 1.07
SMIM11B-206ENST00000624534 ATAD2Q6PL18 1390 aa21.72■■□□□ 1.07
SMIM11B-206ENST00000624534 TMF1P82094 1093 aa21.71■■□□□ 1.07
SMIM11B-206ENST00000624534 COL16A1Q07092 1604 aaPredicted RBP21.7■■□□□ 1.06
SMIM11B-206ENST00000624534 HSPA1LP34931 641 aa21.7■■□□□ 1.06
SMIM11B-206ENST00000624534 CABP2Q9NPB3 220 aa21.7■■□□□ 1.06
SMIM11B-206ENST00000624534 CDCA8Q53HL2 280 aa21.69■■□□□ 1.06
SMIM11B-206ENST00000624534 HSPA5P11021 654 aaKnown RBP21.68■■□□□ 1.06
SMIM11B-206ENST00000624534 PPIP5K1Q6PFW1 1433 aa21.67■■□□□ 1.06
SMIM11B-206ENST00000624534 SOS2Q07890 1332 aaPredicted RBP21.66■■□□□ 1.06
SMIM11B-206ENST00000624534 PLEKHG3A1L390 1219 aa21.66■■□□□ 1.06
SMIM11B-206ENST00000624534 FOXO3O43524 673 aa21.66■■□□□ 1.06
SMIM11B-206ENST00000624534 PMFBP1Q8TBY8 1022 aa21.65■■□□□ 1.06
SMIM11B-206ENST00000624534 NGDNQ8NEJ9 315 aaKnown RBP21.64■■□□□ 1.05
SMIM11B-206ENST00000624534 PXDNQ92626 1479 aa21.64■■□□□ 1.05
SMIM11B-206ENST00000624534 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
SMIM11B-206ENST00000624534 NINLQ9Y2I6 1382 aa21.63■■□□□ 1.05
SMIM11B-206ENST00000624534 PSME1Q06323 249 aa21.63■■□□□ 1.05
SMIM11B-206ENST00000624534 LRRC59Q96AG4 307 aaKnown RBP21.63■■□□□ 1.05
SMIM11B-206ENST00000624534 DISP3Q9P2K9 1392 aa21.62■■□□□ 1.05
SMIM11B-206ENST00000624534 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
SMIM11B-206ENST00000624534 AKAP12Q02952 1782 aa21.61■■□□□ 1.05
SMIM11B-206ENST00000624534 KRT28Q7Z3Y7 464 aa21.61■■□□□ 1.05
SMIM11B-206ENST00000624534 DDX17Q92841 729 aaKnown RBP21.61■■□□□ 1.05
SMIM11B-206ENST00000624534 JCADQ9P266 1359 aa21.61■■□□□ 1.05
SMIM11B-206ENST00000624534 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
SMIM11B-206ENST00000624534 BRD4O60885 1362 aaPredicted RBP21.6■■□□□ 1.05
SMIM11B-206ENST00000624534 ACEP12821 1306 aa21.59■■□□□ 1.05
SMIM11B-206ENST00000624534 TRPM3Q9HCF6 1732 aaPredicted RBP21.59■■□□□ 1.05
SMIM11B-206ENST00000624534 SBNO1A3KN83 1393 aa21.59■■□□□ 1.05
SMIM11B-206ENST00000624534 ZNF692Q9BU19 519 aaPredicted RBP21.57■■□□□ 1.04
SMIM11B-206ENST00000624534 XPCQ01831 940 aaPredicted RBP21.56■■□□□ 1.04
SMIM11B-206ENST00000624534 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
SMIM11B-206ENST00000624534 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
SMIM11B-206ENST00000624534 MON2Q7Z3U7 1717 aa21.55■■□□□ 1.04
SMIM11B-206ENST00000624534 COL22A1Q8NFW1 1626 aaPredicted RBP21.55■■□□□ 1.04
SMIM11B-206ENST00000624534 SPATA31A3Q5VYP0 1347 aa21.55■■□□□ 1.04
SMIM11B-206ENST00000624534 ALS2Q96Q42 1657 aa21.54■■□□□ 1.04
SMIM11B-206ENST00000624534 ARHGEF10O15013 1369 aa21.54■■□□□ 1.04
SMIM11B-206ENST00000624534 TERF2IPQ9NYB0 399 aa21.54■■□□□ 1.04
SMIM11B-206ENST00000624534 USP6P35125 1406 aa21.54■■□□□ 1.04
SMIM11B-206ENST00000624534 CPSF1Q10570 1443 aaKnown RBP21.54■■□□□ 1.04
SMIM11B-206ENST00000624534 MYOM1P52179 1685 aa21.53■■□□□ 1.04
SMIM11B-206ENST00000624534 PNPLA6Q8IY17 1366 aa21.53■■□□□ 1.04
SMIM11B-206ENST00000624534 HDGFL2Q7Z4V5 671 aaPredicted RBP21.53■■□□□ 1.04
SMIM11B-206ENST00000624534 SPATA31A6Q5VVP1 1343 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms