RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 VGFO15240 615 aaPredicted RBP14.46□□□□□ -0.09
ATRX-214ENST00000624166 INSRP06213 1382 aa14.46□□□□□ -0.09
ATRX-214ENST00000624166 IGHDP01880 384 aa14.46□□□□□ -0.1
ATRX-214ENST00000624166 GNAI1P63096 354 aa14.46□□□□□ -0.1
ATRX-214ENST00000624166 PDCL3Q9H2J4 239 aa14.45□□□□□ -0.1
ATRX-214ENST00000624166 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
ATRX-214ENST00000624166 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
ATRX-214ENST00000624166 CHMP4AQ9BY43 222 aa14.45□□□□□ -0.1
ATRX-214ENST00000624166 MCM2P49736 904 aa14.44□□□□□ -0.1
ATRX-214ENST00000624166 CFAP70Q5T0N1 1121 aa14.44□□□□□ -0.1
ATRX-214ENST00000624166 DIAPH3Q9NSV4 1193 aa14.44□□□□□ -0.1
ATRX-214ENST00000624166 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
ATRX-214ENST00000624166 CHD1LQ86WJ1 897 aa14.44□□□□□ -0.1
ATRX-214ENST00000624166 SLC4A10Q6U841 1118 aa14.43□□□□□ -0.1
ATRX-214ENST00000624166 KDM2BQ8NHM5 1336 aa14.43□□□□□ -0.1
ATRX-214ENST00000624166 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
ATRX-214ENST00000624166 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
ATRX-214ENST00000624166 SYNJ2O15056 1496 aa14.43□□□□□ -0.1
ATRX-214ENST00000624166 PRPF40AO75400 957 aaKnown RBP14.42□□□□□ -0.1
ATRX-214ENST00000624166 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
ATRX-214ENST00000624166 RBM10P98175 930 aaKnown RBP14.42□□□□□ -0.1
ATRX-214ENST00000624166 ZNF428Q96B54 188 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 TPM3P06753 285 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 DISP3Q9P2K9 1392 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 RILPL2Q969X0 211 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 ARHGEF12Q9NZN5 1544 aa14.41□□□□□ -0.1
ATRX-214ENST00000624166 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
ATRX-214ENST00000624166 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
ATRX-214ENST00000624166 RNF214Q8ND24 703 aa14.4□□□□□ -0.1
ATRX-214ENST00000624166 TNPO1Q92973 898 aaKnown RBP14.4□□□□□ -0.1
ATRX-214ENST00000624166 TSPY26PQ9H489 355 aa14.4□□□□□ -0.1
ATRX-214ENST00000624166 CCDC141Q6ZP82 1450 aa14.4□□□□□ -0.1
ATRX-214ENST00000624166 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
ATRX-214ENST00000624166 HDAC5Q9UQL6 1122 aa14.4□□□□□ -0.1
ATRX-214ENST00000624166 ARHGAP5Q13017 1502 aa14.4□□□□□ -0.11
ATRX-214ENST00000624166 UHRF1BP1Q6BDS2 1440 aa14.39□□□□□ -0.11
ATRX-214ENST00000624166 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
ATRX-214ENST00000624166 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
ATRX-214ENST00000624166 FOXD4L6Q3SYB3 417 aaPredicted RBP14.39□□□□□ -0.11
ATRX-214ENST00000624166 FOXD4L3Q6VB84 417 aaPredicted RBP14.39□□□□□ -0.11
ATRX-214ENST00000624166 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
ATRX-214ENST00000624166 PER1O15534 1290 aaPredicted RBP14.39□□□□□ -0.11
ATRX-214ENST00000624166 UQCRHP07919 91 aa14.39□□□□□ -0.11
ATRX-214ENST00000624166 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
ATRX-214ENST00000624166 HDGFP51858 240 aaKnown RBP14.38□□□□□ -0.11
ATRX-214ENST00000624166 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.38□□□□□ -0.11
ATRX-214ENST00000624166 ANO2Q9NQ90 1003 aa14.38□□□□□ -0.11
ATRX-214ENST00000624166 ZNF771Q7L3S4 317 aaPredicted RBP14.37□□□□□ -0.11
ATRX-214ENST00000624166 SLC12A5Q9H2X9 1139 aa14.37□□□□□ -0.11
ATRX-214ENST00000624166 TPM4P67936 248 aa14.37□□□□□ -0.11
ATRX-214ENST00000624166 C14orf37Q86TY3 774 aa14.36□□□□□ -0.11
ATRX-214ENST00000624166 ZMYND15Q9H091 742 aa14.36□□□□□ -0.11
ATRX-214ENST00000624166 GGNBP2Q9H3C7 697 aa14.36□□□□□ -0.11
ATRX-214ENST00000624166 NAP1L2Q9ULW6 460 aaPredicted RBP14.35□□□□□ -0.11
ATRX-214ENST00000624166 PRAG1Q86YV5 1406 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 AMER1Q5JTC6 1135 aaPredicted RBP14.35□□□□□ -0.11
ATRX-214ENST00000624166 PLEKHH1Q9ULM0 1364 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 NEK4P51957 841 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 PANK2Q9BZ23 570 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 NUP160Q12769 1436 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 GOLGA6L19H0YKK7 550 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 NUTM2DQ5VT03 806 aaPredicted RBP14.35□□□□□ -0.11
ATRX-214ENST00000624166 TMEM57Q8N5G2 664 aa14.35□□□□□ -0.11
ATRX-214ENST00000624166 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
ATRX-214ENST00000624166 MCM5P33992 734 aa14.34□□□□□ -0.11
ATRX-214ENST00000624166 MAGI1Q96QZ7 1491 aaPredicted RBP14.34□□□□□ -0.11
ATRX-214ENST00000624166 IFT140Q96RY7 1462 aa14.34□□□□□ -0.11
ATRX-214ENST00000624166 KLHL40Q2TBA0 621 aa14.34□□□□□ -0.11
ATRX-214ENST00000624166 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
ATRX-214ENST00000624166 PZPP20742 1482 aa14.34□□□□□ -0.11
ATRX-214ENST00000624166 KIF14Q15058 1648 aa14.34□□□□□ -0.11
ATRX-214ENST00000624166 FAM184AQ8NB25 1140 aa14.33□□□□□ -0.11
ATRX-214ENST00000624166 RUFY2Q8WXA3 655 aa14.33□□□□□ -0.11
ATRX-214ENST00000624166 SMC3Q9UQE7 1217 aa14.33□□□□□ -0.11
ATRX-214ENST00000624166 ZMYM4Q5VZL5 1548 aa14.33□□□□□ -0.11
ATRX-214ENST00000624166 SCAF11Q99590 1463 aaKnown RBP14.33□□□□□ -0.12
ATRX-214ENST00000624166 SNX21Q969T3 373 aa14.33□□□□□ -0.12
ATRX-214ENST00000624166 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
ATRX-214ENST00000624166 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.12
ATRX-214ENST00000624166 ABCC11Q96J66 1382 aa14.33□□□□□ -0.12
ATRX-214ENST00000624166 HDAC1Q13547 482 aaPredicted RBP14.33□□□□□ -0.12
ATRX-214ENST00000624166 GCC2Q8IWJ2 1684 aa14.33□□□□□ -0.12
ATRX-214ENST00000624166 BMP2KLQ5H9B9 411 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 COG3Q96JB2 828 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 TESK2Q96S53 571 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 BLMP54132 1417 aaPredicted RBP14.32□□□□□ -0.12
ATRX-214ENST00000624166 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 ERC2O15083 957 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 SOX12O15370 315 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 SSH1Q8WYL5 1049 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 MINK1Q8N4C8 1332 aaPredicted RBP14.32□□□□□ -0.12
ATRX-214ENST00000624166 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 TMPOP42166 694 aaKnown RBP14.32□□□□□ -0.12
ATRX-214ENST00000624166 ALDH1L2Q3SY69 923 aa14.32□□□□□ -0.12
ATRX-214ENST00000624166 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
ATRX-214ENST00000624166 TNNT3P45378 269 aaPredicted RBP14.31□□□□□ -0.12
ATRX-214ENST00000624166 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
ATRX-214ENST00000624166 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
ATRX-214ENST00000624166 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms