RNA–Protein interactions for RNA: ENST00000623364.3

CDKL5-204, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 3

Gene CDKL5, Length 483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-204ENST00000623364 NUP188Q5SRE5 1749 aa10.93□□□□□ -0.66
CDKL5-204ENST00000623364 RREB1Q92766 1687 aa10.92□□□□□ -0.66
CDKL5-204ENST00000623364 TRIM37O94972 964 aa10.92□□□□□ -0.66
CDKL5-204ENST00000623364 FAM161AQ3B820 660 aa10.92□□□□□ -0.66
CDKL5-204ENST00000623364 JMYQ8N9B5 988 aa10.92□□□□□ -0.66
CDKL5-204ENST00000623364 LAMC1P11047 1609 aa10.91□□□□□ -0.66
CDKL5-204ENST00000623364 ADGRB3O60242 1522 aa10.91□□□□□ -0.66
CDKL5-204ENST00000623364 PTGER2P43116 358 aa10.91□□□□□ -0.66
CDKL5-204ENST00000623364 HDGFP51858 240 aaKnown RBP10.91□□□□□ -0.66
CDKL5-204ENST00000623364 ATP10DQ9P241 1426 aa10.91□□□□□ -0.66
CDKL5-204ENST00000623364 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
CDKL5-204ENST00000623364 ZBTB7AO95365 584 aa10.9□□□□□ -0.66
CDKL5-204ENST00000623364 IDI1Q13907 227 aa10.9□□□□□ -0.66
CDKL5-204ENST00000623364 TNS2Q63HR2 1409 aa10.9□□□□□ -0.66
CDKL5-204ENST00000623364 FAM98CQ17RN3 349 aaKnown RBP10.89□□□□□ -0.67
CDKL5-204ENST00000623364 KLRG1Q96E93 195 aa10.88□□□□□ -0.67
CDKL5-204ENST00000623364 ATF5Q9Y2D1 282 aaPredicted RBP10.88□□□□□ -0.67
CDKL5-204ENST00000623364 AMOTL2Q9Y2J4 779 aa10.88□□□□□ -0.67
CDKL5-204ENST00000623364 ARHGAP31Q2M1Z3 1444 aa10.87□□□□□ -0.67
CDKL5-204ENST00000623364 FAM196AQ6ZSG2 479 aa10.87□□□□□ -0.67
CDKL5-204ENST00000623364 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
CDKL5-204ENST00000623364 MBD5Q9P267 1494 aa10.87□□□□□ -0.67
CDKL5-204ENST00000623364 CEP152O94986 1710 aa10.87□□□□□ -0.67
CDKL5-204ENST00000623364 TRPM2O94759 1503 aa10.86□□□□□ -0.67
CDKL5-204ENST00000623364 TMEM131LA2VDJ0 1609 aa10.86□□□□□ -0.67
CDKL5-204ENST00000623364 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
CDKL5-204ENST00000623364 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
CDKL5-204ENST00000623364 ADGRL3Q9HAR2 1447 aa10.85□□□□□ -0.67
CDKL5-204ENST00000623364 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
CDKL5-204ENST00000623364 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
CDKL5-204ENST00000623364 C1orf167Q5SNV9 1468 aa10.85□□□□□ -0.67
CDKL5-204ENST00000623364 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
CDKL5-204ENST00000623364 CASZ1Q86V15 1759 aa10.85□□□□□ -0.67
CDKL5-204ENST00000623364 ZNF526Q8TF50 670 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-204ENST00000623364 MAP3K5Q99683 1374 aa10.84□□□□□ -0.67
CDKL5-204ENST00000623364 EHBP1L1Q8N3D4 1523 aa10.84□□□□□ -0.67
CDKL5-204ENST00000623364 NOS1P29475 1434 aa10.84□□□□□ -0.67
CDKL5-204ENST00000623364 ZNF644Q9H582 1327 aaPredicted RBP10.84□□□□□ -0.67
CDKL5-204ENST00000623364 ORAI2Q96SN7 254 aa10.83□□□□□ -0.68
CDKL5-204ENST00000623364 FYCO1Q9BQS8 1478 aa10.82□□□□□ -0.68
CDKL5-204ENST00000623364 GRIN3BO60391 1043 aa10.82□□□□□ -0.68
CDKL5-204ENST00000623364 ARXQ96QS3 562 aa10.82□□□□□ -0.68
CDKL5-204ENST00000623364 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-204ENST00000623364 MLLT1Q03111 559 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-204ENST00000623364 PDGFDQ9GZP0 370 aaPredicted RBP10.81□□□□□ -0.68
CDKL5-204ENST00000623364 ZFYVE9O95405 1425 aa10.81□□□□□ -0.68
CDKL5-204ENST00000623364 ADAMTS13Q76LX8 1427 aa10.81□□□□□ -0.68
CDKL5-204ENST00000623364 NPHP3Q7Z494 1330 aa10.81□□□□□ -0.68
CDKL5-204ENST00000623364 NWD2Q9ULI1 1742 aa10.81□□□□□ -0.68
CDKL5-204ENST00000623364 ABCC5O15440 1437 aa10.8□□□□□ -0.68
CDKL5-204ENST00000623364 RIMS2Q9UQ26 1411 aa10.8□□□□□ -0.68
CDKL5-204ENST00000623364 RSPH4AQ5TD94 716 aa10.79□□□□□ -0.68
CDKL5-204ENST00000623364 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDKL5-204ENST00000623364 CSRNP3Q8WYN3 585 aa10.79□□□□□ -0.68
CDKL5-204ENST00000623364 MTFR1LQ9H019 292 aa10.79□□□□□ -0.68
CDKL5-204ENST00000623364 USP32Q8NFA0 1604 aa10.79□□□□□ -0.68
CDKL5-204ENST00000623364 CCDC141Q6ZP82 1450 aa10.79□□□□□ -0.68
CDKL5-204ENST00000623364 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
CDKL5-204ENST00000623364 PTPRUQ92729 1446 aa10.78□□□□□ -0.68
CDKL5-204ENST00000623364 PTPN23Q9H3S7 1636 aa10.78□□□□□ -0.68
CDKL5-204ENST00000623364 NEXMIFQ5QGS0 1516 aa10.78□□□□□ -0.68
CDKL5-204ENST00000623364 EIF2AK4Q9P2K8 1649 aaKnown RBP10.77□□□□□ -0.68
CDKL5-204ENST00000623364 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
CDKL5-204ENST00000623364 KIF3CO14782 793 aa10.77□□□□□ -0.69
CDKL5-204ENST00000623364 HSPA1AP0DMV8 641 aaKnown RBP10.77□□□□□ -0.69
CDKL5-204ENST00000623364 HSPA1BP0DMV9 641 aaKnown RBP10.77□□□□□ -0.69
CDKL5-204ENST00000623364 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.69
CDKL5-204ENST00000623364 SGIP1Q9BQI5 828 aa10.76□□□□□ -0.69
CDKL5-204ENST00000623364 ANO8Q9HCE9 1232 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-204ENST00000623364 ADGRL2O95490 1459 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 TOMM70O94826 608 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 PCNTO95613 3336 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
CDKL5-204ENST00000623364 PXDNQ92626 1479 aa10.74□□□□□ -0.69
CDKL5-204ENST00000623364 XPCQ01831 940 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-204ENST00000623364 KLHL34Q8N239 644 aa10.74□□□□□ -0.69
CDKL5-204ENST00000623364 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-204ENST00000623364 GOLGB1Q14789 3259 aaKnown RBP10.73□□□□□ -0.69
CDKL5-204ENST00000623364 HTRA3P83110 453 aa10.73□□□□□ -0.69
CDKL5-204ENST00000623364 USP19O94966 1318 aa10.73□□□□□ -0.69
CDKL5-204ENST00000623364 ADCY9O60503 1353 aa10.73□□□□□ -0.69
CDKL5-204ENST00000623364 NALCNQ8IZF0 1738 aa10.72□□□□□ -0.69
CDKL5-204ENST00000623364 XRN1Q8IZH2 1706 aaKnown RBP10.72□□□□□ -0.69
CDKL5-204ENST00000623364 CHGAP10645 457 aaKnown RBP10.72□□□□□ -0.69
CDKL5-204ENST00000623364 LRPPRCP42704 1394 aaKnown RBP10.72□□□□□ -0.69
CDKL5-204ENST00000623364 THSD7AQ9UPZ6 1657 aa10.72□□□□□ -0.69
CDKL5-204ENST00000623364 FOXO3O43524 673 aa10.71□□□□□ -0.69
CDKL5-204ENST00000623364 KIAA1210Q9ULL0 1709 aa10.7□□□□□ -0.7
CDKL5-204ENST00000623364 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
CDKL5-204ENST00000623364 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
CDKL5-204ENST00000623364 ESCO1Q5FWF5 840 aa10.7□□□□□ -0.7
CDKL5-204ENST00000623364 STK32BQ9NY57 414 aa10.7□□□□□ -0.7
CDKL5-204ENST00000623364 YBX3P16989 372 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDKL5-204ENST00000623364 PDE3BQ13370 1112 aa10.69□□□□□ -0.7
CDKL5-204ENST00000623364 MYO5BQ9ULV0 1848 aa10.68□□□□□ -0.7
CDKL5-204ENST00000623364 SPATA31A3Q5VYP0 1347 aa10.68□□□□□ -0.7
CDKL5-204ENST00000623364 BTG4Q9NY30 223 aa10.68□□□□□ -0.7
CDKL5-204ENST00000623364 PDE4DIPQ5VU43 2346 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms