RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 DIP2AQ14689 1571 aa20.54■□□□□ 0.88
ATRX-211ENST00000623321 KNDC1Q76NI1 1749 aa20.54■□□□□ 0.88
ATRX-211ENST00000623321 PANK3Q9H999 370 aa20.53■□□□□ 0.88
ATRX-211ENST00000623321 WAPLQ7Z5K2 1190 aa20.52■□□□□ 0.88
ATRX-211ENST00000623321 FAM135BQ49AJ0 1406 aa20.52■□□□□ 0.88
ATRX-211ENST00000623321 PRKRIP1Q9H875 184 aaPredicted RBP20.51■□□□□ 0.87
ATRX-211ENST00000623321 TULP4Q9NRJ4 1543 aa20.51■□□□□ 0.87
ATRX-211ENST00000623321 PER1O15534 1290 aaPredicted RBP20.5■□□□□ 0.87
ATRX-211ENST00000623321 CPS1P31327 1500 aa20.5■□□□□ 0.87
ATRX-211ENST00000623321 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
ATRX-211ENST00000623321 PLEKHH1Q9ULM0 1364 aa20.49■□□□□ 0.87
ATRX-211ENST00000623321 MYOM1P52179 1685 aa20.49■□□□□ 0.87
ATRX-211ENST00000623321 PTPRUQ92729 1446 aa20.49■□□□□ 0.87
ATRX-211ENST00000623321 PIK3R4Q99570 1358 aa20.48■□□□□ 0.87
ATRX-211ENST00000623321 AMOTL2Q9Y2J4 779 aa20.47■□□□□ 0.87
ATRX-211ENST00000623321 ROBO2Q9HCK4 1378 aa20.46■□□□□ 0.87
ATRX-211ENST00000623321 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
ATRX-211ENST00000623321 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
ATRX-211ENST00000623321 NPHP4O75161 1426 aaPredicted RBP20.45■□□□□ 0.86
ATRX-211ENST00000623321 CDK19Q9BWU1 502 aa20.44■□□□□ 0.86
ATRX-211ENST00000623321 NCKAP5LQ9HCH0 1330 aa20.43■□□□□ 0.86
ATRX-211ENST00000623321 CCDC184Q52MB2 194 aa20.43■□□□□ 0.86
ATRX-211ENST00000623321 ERICH6BQ5W0A0 696 aa20.43■□□□□ 0.86
ATRX-211ENST00000623321 TMC1Q8TDI8 760 aa20.43■□□□□ 0.86
ATRX-211ENST00000623321 ATAD2Q6PL18 1390 aa20.42■□□□□ 0.86
ATRX-211ENST00000623321 KTN1Q86UP2 1357 aaKnown RBP20.42■□□□□ 0.86
ATRX-211ENST00000623321 SLC12A5Q9H2X9 1139 aa20.42■□□□□ 0.86
ATRX-211ENST00000623321 KNSTRNQ9Y448 316 aa20.42■□□□□ 0.86
ATRX-211ENST00000623321 PTCH1Q13635 1447 aa20.42■□□□□ 0.86
ATRX-211ENST00000623321 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
ATRX-211ENST00000623321 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
ATRX-211ENST00000623321 WASLO00401 505 aaPredicted RBP20.4■□□□□ 0.86
ATRX-211ENST00000623321 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
ATRX-211ENST00000623321 RALBP1Q15311 655 aa20.4■□□□□ 0.86
ATRX-211ENST00000623321 ZBED9Q6R2W3 1325 aa20.4■□□□□ 0.86
ATRX-211ENST00000623321 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
ATRX-211ENST00000623321 KCNA6P17658 529 aa20.37■□□□□ 0.85
ATRX-211ENST00000623321 CARD14Q9BXL6 1004 aa20.37■□□□□ 0.85
ATRX-211ENST00000623321 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
ATRX-211ENST00000623321 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.36■□□□□ 0.85
ATRX-211ENST00000623321 AMER1Q5JTC6 1135 aaPredicted RBP20.36■□□□□ 0.85
ATRX-211ENST00000623321 ANP32EQ9BTT0 268 aa20.36■□□□□ 0.85
ATRX-211ENST00000623321 RBM19Q9Y4C8 960 aaKnown RBP20.36■□□□□ 0.85
ATRX-211ENST00000623321 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
ATRX-211ENST00000623321 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
ATRX-211ENST00000623321 ADGRB2O60241 1585 aa20.35■□□□□ 0.85
ATRX-211ENST00000623321 NPC1L1Q9UHC9 1359 aa20.35■□□□□ 0.85
ATRX-211ENST00000623321 CC2D1BQ5T0F9 858 aaKnown RBP20.35■□□□□ 0.85
ATRX-211ENST00000623321 LMTK3Q96Q04 1460 aa20.34■□□□□ 0.85
ATRX-211ENST00000623321 HSPA2P54652 639 aa20.34■□□□□ 0.85
ATRX-211ENST00000623321 MYBBP1AQ9BQG0 1328 aaKnown RBP20.32■□□□□ 0.84
ATRX-211ENST00000623321 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
ATRX-211ENST00000623321 TERF2IPQ9NYB0 399 aa20.31■□□□□ 0.84
ATRX-211ENST00000623321 CABP1Q9NZU7 370 aa20.31■□□□□ 0.84
ATRX-211ENST00000623321 NUDT16Q96DE0 195 aaKnown RBP20.3■□□□□ 0.84
ATRX-211ENST00000623321 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
ATRX-211ENST00000623321 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
ATRX-211ENST00000623321 A0A1W2PP64 1363 aa20.28■□□□□ 0.84
ATRX-211ENST00000623321 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
ATRX-211ENST00000623321 CD163L1Q9NR16 1453 aa20.27■□□□□ 0.84
ATRX-211ENST00000623321 PPP4R2Q9NY27 417 aa20.27■□□□□ 0.84
ATRX-211ENST00000623321 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
ATRX-211ENST00000623321 ATP7BP35670 1465 aa20.26■□□□□ 0.83
ATRX-211ENST00000623321 PPIP5K1Q6PFW1 1433 aa20.26■□□□□ 0.83
ATRX-211ENST00000623321 USP32Q8NFA0 1604 aa20.26■□□□□ 0.83
ATRX-211ENST00000623321 IRX6P78412 446 aaPredicted RBP20.26■□□□□ 0.83
ATRX-211ENST00000623321 NLRP13Q86W25 1043 aa20.26■□□□□ 0.83
ATRX-211ENST00000623321 CGNL1Q0VF96 1302 aa20.25■□□□□ 0.83
ATRX-211ENST00000623321 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
ATRX-211ENST00000623321 BRD4O60885 1362 aaPredicted RBP20.25■□□□□ 0.83
ATRX-211ENST00000623321 SMG6Q86US8 1419 aaKnown RBP20.24■□□□□ 0.83
ATRX-211ENST00000623321 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
ATRX-211ENST00000623321 CPSF1Q10570 1443 aaKnown RBP20.21■□□□□ 0.83
ATRX-211ENST00000623321 NSD2O96028 1365 aa20.21■□□□□ 0.83
ATRX-211ENST00000623321 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
ATRX-211ENST00000623321 NUTM2FA1L443 756 aa20.2■□□□□ 0.82
ATRX-211ENST00000623321 PPP2R1AP30153 589 aa20.2■□□□□ 0.82
ATRX-211ENST00000623321 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
ATRX-211ENST00000623321 PROSER2Q86WR7 435 aaPredicted RBP20.2■□□□□ 0.82
ATRX-211ENST00000623321 ZNF692Q9BU19 519 aaPredicted RBP20.2■□□□□ 0.82
ATRX-211ENST00000623321 CDC42BPGQ6DT37 1551 aa20.19■□□□□ 0.82
ATRX-211ENST00000623321 RBM33Q96EV2 1170 aaKnown RBP20.19■□□□□ 0.82
ATRX-211ENST00000623321 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
ATRX-211ENST00000623321 NALCNQ8IZF0 1738 aa20.18■□□□□ 0.82
ATRX-211ENST00000623321 MORC1Q86VD1 984 aa20.18■□□□□ 0.82
ATRX-211ENST00000623321 ANKARQ7Z5J8 1434 aa20.18■□□□□ 0.82
ATRX-211ENST00000623321 ADGRL3Q9HAR2 1447 aa20.18■□□□□ 0.82
ATRX-211ENST00000623321 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
ATRX-211ENST00000623321 PNISRQ8TF01 805 aaKnown RBP20.17■□□□□ 0.82
ATRX-211ENST00000623321 FMN2Q9NZ56 1722 aa20.16■□□□□ 0.82
ATRX-211ENST00000623321 FYB1O15117 783 aa20.16■□□□□ 0.82
ATRX-211ENST00000623321 C14orf37Q86TY3 774 aa20.16■□□□□ 0.82
ATRX-211ENST00000623321 EDC4Q6P2E9 1401 aaKnown RBP20.15■□□□□ 0.82
ATRX-211ENST00000623321 ITSN1Q15811 1721 aa20.15■□□□□ 0.82
ATRX-211ENST00000623321 ACEP12821 1306 aa20.15■□□□□ 0.82
ATRX-211ENST00000623321 AKAP12Q02952 1782 aa20.14■□□□□ 0.82
ATRX-211ENST00000623321 MON2Q7Z3U7 1717 aa20.13■□□□□ 0.81
ATRX-211ENST00000623321 RNF123Q5XPI4 1314 aa20.13■□□□□ 0.81
ATRX-211ENST00000623321 STRCP1A6NGW2 1772 aa20.12■□□□□ 0.81
ATRX-211ENST00000623321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms