RNA–Protein interactions for RNA: ENST00000623115.3

ERCC6-210, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 2,932 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-210ENST00000623115 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
ERCC6-210ENST00000623115 CD2BP2O95400 341 aaKnown RBP12.05□□□□□ -0.48
ERCC6-210ENST00000623115 TNPO1Q92973 898 aaKnown RBP12.05□□□□□ -0.48
ERCC6-210ENST00000623115 IQGAP3Q86VI3 1631 aa12.05□□□□□ -0.48
ERCC6-210ENST00000623115 AK9Q5TCS8 1911 aa12.05□□□□□ -0.48
ERCC6-210ENST00000623115 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 DUOX2Q9NRD8 1548 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 MYO5CQ9NQX4 1742 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 NCLP19338 710 aaKnown RBP12.04□□□□□ -0.48
ERCC6-210ENST00000623115 PLCB2Q00722 1185 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 CFAP70Q5T0N1 1121 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 KIAA1211Q6ZU35 1233 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 EFCAB2Q5VUJ9 269 aa12.04□□□□□ -0.48
ERCC6-210ENST00000623115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.03□□□□□ -0.48
ERCC6-210ENST00000623115 RRP9O43818 475 aaKnown RBP12.03□□□□□ -0.48
ERCC6-210ENST00000623115 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
ERCC6-210ENST00000623115 RWDD1Q9H446 243 aaPredicted RBP12.03□□□□□ -0.48
ERCC6-210ENST00000623115 CHAMP1Q96JM3 812 aa12.03□□□□□ -0.48
ERCC6-210ENST00000623115 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
ERCC6-210ENST00000623115 STAC3Q96MF2 364 aa12.02□□□□□ -0.48
ERCC6-210ENST00000623115 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
ERCC6-210ENST00000623115 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.49
ERCC6-210ENST00000623115 SCAF11Q99590 1463 aaKnown RBP12.02□□□□□ -0.49
ERCC6-210ENST00000623115 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.49
ERCC6-210ENST00000623115 FAM13BQ9NYF5 915 aa12.02□□□□□ -0.49
ERCC6-210ENST00000623115 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
ERCC6-210ENST00000623115 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
ERCC6-210ENST00000623115 MPNDQ8N594 471 aa12.01□□□□□ -0.49
ERCC6-210ENST00000623115 SLC12A5Q9H2X9 1139 aa12.01□□□□□ -0.49
ERCC6-210ENST00000623115 SMC4Q9NTJ3 1288 aa12.01□□□□□ -0.49
ERCC6-210ENST00000623115 PLXNC1O60486 1568 aa12□□□□□ -0.49
ERCC6-210ENST00000623115 CHGAP10645 457 aaKnown RBP12□□□□□ -0.49
ERCC6-210ENST00000623115 ZNF692Q9BU19 519 aaPredicted RBP12□□□□□ -0.49
ERCC6-210ENST00000623115 NPC1L1Q9UHC9 1359 aa12□□□□□ -0.49
ERCC6-210ENST00000623115 U2AF1L5P0DN76 240 aaPredicted RBP12□□□□□ -0.49
ERCC6-210ENST00000623115 SSFA2P28290 1259 aa12□□□□□ -0.49
ERCC6-210ENST00000623115 U2AF1Q01081 240 aaKnown RBP eCLIP12□□□□□ -0.49
ERCC6-210ENST00000623115 AFAP1Q8N556 730 aa12□□□□□ -0.49
ERCC6-210ENST00000623115 MTHFSP49914 203 aa11.99□□□□□ -0.49
ERCC6-210ENST00000623115 FOXD4L5Q5VV16 416 aaPredicted RBP11.99□□□□□ -0.49
ERCC6-210ENST00000623115 FOXD4L4Q8WXT5 416 aaPredicted RBP11.99□□□□□ -0.49
ERCC6-210ENST00000623115 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
ERCC6-210ENST00000623115 SAFB2Q14151 953 aaKnown RBP eCLIP11.99□□□□□ -0.49
ERCC6-210ENST00000623115 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
ERCC6-210ENST00000623115 EXOSC9Q06265 439 aaKnown RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 NUTM2DQ5VT03 806 aaPredicted RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 R3HCC1Q9Y3T6 440 aaKnown RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 RNF17Q9BXT8 1623 aaKnown RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 U2SURPO15042 1029 aaKnown RBP11.98□□□□□ -0.49
ERCC6-210ENST00000623115 TRIM27P14373 513 aa11.98□□□□□ -0.49
ERCC6-210ENST00000623115 SCAPERQ9BY12 1400 aa11.98□□□□□ -0.49
ERCC6-210ENST00000623115 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 NGEFQ8N5V2 710 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 TRAK1Q9UPV9 953 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 PLCH2O75038 1416 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 SYNMO15061 1565 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 XPCQ01831 940 aaPredicted RBP11.97□□□□□ -0.49
ERCC6-210ENST00000623115 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
ERCC6-210ENST00000623115 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
ERCC6-210ENST00000623115 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.49
ERCC6-210ENST00000623115 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
ERCC6-210ENST00000623115 NASPP49321 788 aaPredicted RBP11.96□□□□□ -0.49
ERCC6-210ENST00000623115 ZKSCAN2Q63HK3 967 aa11.96□□□□□ -0.49
ERCC6-210ENST00000623115 ELL2O00472 640 aaPredicted RBP11.96□□□□□ -0.5
ERCC6-210ENST00000623115 TMEM57Q8N5G2 664 aa11.96□□□□□ -0.5
ERCC6-210ENST00000623115 SSH1Q8WYL5 1049 aa11.96□□□□□ -0.5
ERCC6-210ENST00000623115 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.5
ERCC6-210ENST00000623115 RUNDC1Q96C34 613 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 NOB1Q9ULX3 412 aaKnown RBP11.95□□□□□ -0.5
ERCC6-210ENST00000623115 IQGAP1P46940 1657 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 ZBTB22O15209 634 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 ADRA2BP18089 450 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 PKP1Q13835 747 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 TMEM132EQ6IEE7 984 aa11.95□□□□□ -0.5
ERCC6-210ENST00000623115 GAS2L2Q8NHY3 880 aa11.94□□□□□ -0.5
ERCC6-210ENST00000623115 CAVIN1Q6NZI2 390 aaKnown RBP11.94□□□□□ -0.5
ERCC6-210ENST00000623115 ABCC2Q92887 1545 aa11.94□□□□□ -0.5
ERCC6-210ENST00000623115 A0A0U1RQG5 324 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-210ENST00000623115 MSNP26038 577 aaKnown RBP11.93□□□□□ -0.5
ERCC6-210ENST00000623115 FOXD4L6Q3SYB3 417 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-210ENST00000623115 ANKRD45Q5TZF3 282 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 MCTP1Q6DN14 999 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 FOXD4L3Q6VB84 417 aaPredicted RBP11.93□□□□□ -0.5
ERCC6-210ENST00000623115 PTPRTO14522 1441 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 ADGRF5Q8IZF2 1346 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 APBB1O00213 710 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 KIF3BO15066 747 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 RBM27Q9P2N5 1060 aaKnown RBP11.93□□□□□ -0.5
ERCC6-210ENST00000623115 GBP4Q96PP9 640 aa11.93□□□□□ -0.5
ERCC6-210ENST00000623115 TRPM2O94759 1503 aa11.92□□□□□ -0.5
ERCC6-210ENST00000623115 KANK1Q14678 1352 aa11.92□□□□□ -0.5
ERCC6-210ENST00000623115 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
ERCC6-210ENST00000623115 RIPK4P57078 832 aa11.92□□□□□ -0.5
ERCC6-210ENST00000623115 RNF214Q8ND24 703 aa11.92□□□□□ -0.5
ERCC6-210ENST00000623115 FBLN1P23142 703 aa11.91□□□□□ -0.5
ERCC6-210ENST00000623115 TSC1Q92574 1164 aa11.91□□□□□ -0.5
ERCC6-210ENST00000623115 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms