RNA–Protein interactions for RNA: ENST00000622947.1

PCDHB2-202, Transcript of protocadherin beta 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHB2, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2-202ENST00000622947 LTKP29376 864 aa24.92■■□□□ 1.58
PCDHB2-202ENST00000622947 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
PCDHB2-202ENST00000622947 POGKQ9P215 609 aa24.91■■□□□ 1.58
PCDHB2-202ENST00000622947 PLEKHH1Q9ULM0 1364 aa24.9■■□□□ 1.58
PCDHB2-202ENST00000622947 DLC1Q96QB1 1528 aa24.9■■□□□ 1.58
PCDHB2-202ENST00000622947 SENP3-EIF4A1A0A087X0R7 540 aa24.9■■□□□ 1.58
PCDHB2-202ENST00000622947 PPP2R1AP30153 589 aa24.9■■□□□ 1.58
PCDHB2-202ENST00000622947 WAPLQ7Z5K2 1190 aa24.9■■□□□ 1.58
PCDHB2-202ENST00000622947 PRKCSHP14314 528 aaPredicted RBP24.89■■□□□ 1.57
PCDHB2-202ENST00000622947 ABCC11Q96J66 1382 aa24.88■■□□□ 1.57
PCDHB2-202ENST00000622947 NSD3Q9BZ95 1437 aa24.87■■□□□ 1.57
PCDHB2-202ENST00000622947 HDGFP51858 240 aaKnown RBP24.87■■□□□ 1.57
PCDHB2-202ENST00000622947 ADAMTS13Q76LX8 1427 aa24.87■■□□□ 1.57
PCDHB2-202ENST00000622947 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
PCDHB2-202ENST00000622947 SRPK2P78362 688 aaKnown RBP24.84■■□□□ 1.57
PCDHB2-202ENST00000622947 SLIT1O75093 1534 aa24.83■■□□□ 1.56
PCDHB2-202ENST00000622947 ARHGAP23Q9P227 1491 aa24.83■■□□□ 1.56
PCDHB2-202ENST00000622947 TXNDC2Q86VQ3 553 aa24.82■■□□□ 1.56
PCDHB2-202ENST00000622947 ANKRD36BQ8N2N9 1353 aa24.81■■□□□ 1.56
PCDHB2-202ENST00000622947 PLEKHG1Q9ULL1 1385 aa24.81■■□□□ 1.56
PCDHB2-202ENST00000622947 BCANQ96GW7 911 aa24.81■■□□□ 1.56
PCDHB2-202ENST00000622947 CDK19Q9BWU1 502 aa24.81■■□□□ 1.56
PCDHB2-202ENST00000622947 KNDC1Q76NI1 1749 aa24.81■■□□□ 1.56
PCDHB2-202ENST00000622947 USP32Q8NFA0 1604 aa24.8■■□□□ 1.56
PCDHB2-202ENST00000622947 ADAMTSL3P82987 1691 aa24.79■■□□□ 1.56
PCDHB2-202ENST00000622947 TECPR2O15040 1411 aa24.79■■□□□ 1.56
PCDHB2-202ENST00000622947 MED14O60244 1454 aa24.79■■□□□ 1.56
PCDHB2-202ENST00000622947 CD163L1Q9NR16 1453 aa24.78■■□□□ 1.56
PCDHB2-202ENST00000622947 A0A1W2PP64 1363 aa24.78■■□□□ 1.56
PCDHB2-202ENST00000622947 ATAD2Q6PL18 1390 aa24.77■■□□□ 1.56
PCDHB2-202ENST00000622947 CPS1P31327 1500 aa24.76■■□□□ 1.55
PCDHB2-202ENST00000622947 SLC26A8Q96RN1 970 aa24.76■■□□□ 1.55
PCDHB2-202ENST00000622947 ROBO2Q9HCK4 1378 aa24.74■■□□□ 1.55
PCDHB2-202ENST00000622947 NINLQ9Y2I6 1382 aa24.74■■□□□ 1.55
PCDHB2-202ENST00000622947 FAM135BQ49AJ0 1406 aa24.74■■□□□ 1.55
PCDHB2-202ENST00000622947 EID1Q9Y6B2 187 aa24.74■■□□□ 1.55
PCDHB2-202ENST00000622947 THEMISQ8N1K5 641 aaPredicted RBP24.73■■□□□ 1.55
PCDHB2-202ENST00000622947 ADAMTS8Q9UP79 889 aa24.73■■□□□ 1.55
PCDHB2-202ENST00000622947 CEP170BQ9Y4F5 1589 aaPredicted RBP24.73■■□□□ 1.55
PCDHB2-202ENST00000622947 BLMP54132 1417 aaPredicted RBP24.73■■□□□ 1.55
PCDHB2-202ENST00000622947 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
PCDHB2-202ENST00000622947 SIRT1Q96EB6 747 aa24.72■■□□□ 1.55
PCDHB2-202ENST00000622947 CGNL1Q0VF96 1302 aa24.71■■□□□ 1.55
PCDHB2-202ENST00000622947 CABP1Q9NZU7 370 aa24.71■■□□□ 1.55
PCDHB2-202ENST00000622947 INSRP06213 1382 aa24.69■■□□□ 1.54
PCDHB2-202ENST00000622947 FKBP8Q14318 412 aa24.69■■□□□ 1.54
PCDHB2-202ENST00000622947 MORC1Q86VD1 984 aa24.69■■□□□ 1.54
PCDHB2-202ENST00000622947 WASLO00401 505 aaPredicted RBP24.69■■□□□ 1.54
PCDHB2-202ENST00000622947 TNNT2P45379 298 aaPredicted RBP24.69■■□□□ 1.54
PCDHB2-202ENST00000622947 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.68■■□□□ 1.54
PCDHB2-202ENST00000622947 SALL2Q9Y467 1007 aaPredicted RBP24.67■■□□□ 1.54
PCDHB2-202ENST00000622947 RBM19Q9Y4C8 960 aaKnown RBP24.66■■□□□ 1.54
PCDHB2-202ENST00000622947 SMG6Q86US8 1419 aaKnown RBP24.66■■□□□ 1.54
PCDHB2-202ENST00000622947 TERF2IPQ9NYB0 399 aa24.65■■□□□ 1.54
PCDHB2-202ENST00000622947 TBX22Q9Y458 520 aa24.65■■□□□ 1.54
PCDHB2-202ENST00000622947 NCKAP5LQ9HCH0 1330 aa24.64■■□□□ 1.54
PCDHB2-202ENST00000622947 NSD2O96028 1365 aa24.63■■□□□ 1.53
PCDHB2-202ENST00000622947 WDR43Q15061 677 aaKnown RBP eCLIP24.62■■□□□ 1.53
PCDHB2-202ENST00000622947 ZNF142P52746 1687 aaPredicted RBP24.62■■□□□ 1.53
PCDHB2-202ENST00000622947 SETD1BQ9UPS6 1966 aaKnown RBP24.62■■□□□ 1.53
PCDHB2-202ENST00000622947 POLR3AO14802 1390 aaPredicted RBP24.62■■□□□ 1.53
PCDHB2-202ENST00000622947 FYB1O15117 783 aa24.62■■□□□ 1.53
PCDHB2-202ENST00000622947 GGNBP2Q9H3C7 697 aa24.61■■□□□ 1.53
PCDHB2-202ENST00000622947 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
PCDHB2-202ENST00000622947 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
PCDHB2-202ENST00000622947 SHPRHQ149N8 1683 aa24.6■■□□□ 1.53
PCDHB2-202ENST00000622947 PRR36Q9H6K5 1346 aa24.6■■□□□ 1.53
PCDHB2-202ENST00000622947 ATP7BP35670 1465 aa24.6■■□□□ 1.53
PCDHB2-202ENST00000622947 NEFLP07196 543 aa24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 PPIP5K1Q6PFW1 1433 aa24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 HDGFL2Q7Z4V5 671 aaPredicted RBP24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 ANKRD26Q9UPS8 1709 aa24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 DIP2AQ14689 1571 aa24.59■■□□□ 1.53
PCDHB2-202ENST00000622947 ADGRB2O60241 1585 aa24.58■■□□□ 1.53
PCDHB2-202ENST00000622947 MTHFSP49914 203 aa24.58■■□□□ 1.52
PCDHB2-202ENST00000622947 CPSF1Q10570 1443 aaKnown RBP24.57■■□□□ 1.52
PCDHB2-202ENST00000622947 ERICH6Q7L0X2 663 aa24.57■■□□□ 1.52
PCDHB2-202ENST00000622947 KIF20BQ96Q89 1820 aa24.56■■□□□ 1.52
PCDHB2-202ENST00000622947 IRX6P78412 446 aaPredicted RBP24.55■■□□□ 1.52
PCDHB2-202ENST00000622947 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
PCDHB2-202ENST00000622947 CCDC146Q8IYE0 955 aa24.54■■□□□ 1.52
PCDHB2-202ENST00000622947 CDCA7LQ96GN5 454 aa24.54■■□□□ 1.52
PCDHB2-202ENST00000622947 CCDC61Q9Y6R9 512 aa24.54■■□□□ 1.52
PCDHB2-202ENST00000622947 PTCH1Q13635 1447 aa24.53■■□□□ 1.52
PCDHB2-202ENST00000622947 CDC42BPGQ6DT37 1551 aa24.53■■□□□ 1.52
PCDHB2-202ENST00000622947 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.52■■□□□ 1.52
PCDHB2-202ENST00000622947 AKAP12Q02952 1782 aa24.5■■□□□ 1.51
PCDHB2-202ENST00000622947 ANKLE2Q86XL3 938 aa24.5■■□□□ 1.51
PCDHB2-202ENST00000622947 MON2Q7Z3U7 1717 aa24.5■■□□□ 1.51
PCDHB2-202ENST00000622947 NUTM2FA1L443 756 aa24.5■■□□□ 1.51
PCDHB2-202ENST00000622947 TOPAZ1Q8N9V7 1692 aa24.49■■□□□ 1.51
PCDHB2-202ENST00000622947 KCNA6P17658 529 aa24.49■■□□□ 1.51
PCDHB2-202ENST00000622947 PDE3BQ13370 1112 aa24.47■■□□□ 1.51
PCDHB2-202ENST00000622947 EDC4Q6P2E9 1401 aaKnown RBP24.47■■□□□ 1.51
PCDHB2-202ENST00000622947 ITSN1Q15811 1721 aa24.47■■□□□ 1.51
PCDHB2-202ENST00000622947 ZNF521Q96K83 1311 aa24.46■■□□□ 1.51
PCDHB2-202ENST00000622947 APAF1O14727 1248 aa24.46■■□□□ 1.51
PCDHB2-202ENST00000622947 FBLN1P23142 703 aa24.46■■□□□ 1.51
PCDHB2-202ENST00000622947 CHD2O14647 1828 aaKnown RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms