RNA–Protein interactions for RNA: ENST00000622371.1

TMCO3-211, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-211ENST00000622371 TATDN2Q93075 761 aa10.98□□□□□ -0.65
TMCO3-211ENST00000622371 USP35Q9P2H5 1018 aa10.98□□□□□ -0.65
TMCO3-211ENST00000622371 HELBQ8NG08 1087 aaPredicted RBP10.98□□□□□ -0.65
TMCO3-211ENST00000622371 ARSIQ5FYB1 569 aa10.97□□□□□ -0.65
TMCO3-211ENST00000622371 CLCN6P51797 869 aa10.97□□□□□ -0.65
TMCO3-211ENST00000622371 MTMR2Q13614 643 aa10.96□□□□□ -0.66
TMCO3-211ENST00000622371 STK32AQ8WU08 396 aa10.96□□□□□ -0.66
TMCO3-211ENST00000622371 NR6A1Q15406 480 aa10.95□□□□□ -0.66
TMCO3-211ENST00000622371 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
TMCO3-211ENST00000622371 GCGRP47871 477 aa10.95□□□□□ -0.66
TMCO3-211ENST00000622371 SEMA3FQ13275 785 aa10.95□□□□□ -0.66
TMCO3-211ENST00000622371 ZMIZ1Q9ULJ6 1067 aa10.94□□□□□ -0.66
TMCO3-211ENST00000622371 TMEM164Q5U3C3 297 aa10.94□□□□□ -0.66
TMCO3-211ENST00000622371 SYMPKQ92797 1274 aaKnown RBP10.94□□□□□ -0.66
TMCO3-211ENST00000622371 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
TMCO3-211ENST00000622371 GNEQ9Y223 722 aaKnown RBP10.93□□□□□ -0.66
TMCO3-211ENST00000622371 PIK3CDO00329 1044 aa10.92□□□□□ -0.66
TMCO3-211ENST00000622371 SLC10A3P09131 477 aa10.92□□□□□ -0.66
TMCO3-211ENST00000622371 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
TMCO3-211ENST00000622371 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
TMCO3-211ENST00000622371 SLC39A7Q92504 469 aa10.92□□□□□ -0.66
TMCO3-211ENST00000622371 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
TMCO3-211ENST00000622371 USP46P62068 366 aa10.91□□□□□ -0.66
TMCO3-211ENST00000622371 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.91□□□□□ -0.66
TMCO3-211ENST00000622371 DCBLD2Q96PD2 775 aa10.91□□□□□ -0.66
TMCO3-211ENST00000622371 ATP9BO43861 1147 aa10.9□□□□□ -0.66
TMCO3-211ENST00000622371 PHLDB3Q6NSJ2 640 aa10.9□□□□□ -0.66
TMCO3-211ENST00000622371 TRIM6-TRIM34B2RNG4 842 aa10.9□□□□□ -0.66
TMCO3-211ENST00000622371 KANK4Q5T7N3 995 aaPredicted RBP10.9□□□□□ -0.66
TMCO3-211ENST00000622371 LHX6Q9UPM6 363 aa10.9□□□□□ -0.67
TMCO3-211ENST00000622371 PPP1R3GB7ZBB8 358 aa10.89□□□□□ -0.67
TMCO3-211ENST00000622371 SOX11P35716 441 aa10.88□□□□□ -0.67
TMCO3-211ENST00000622371 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
TMCO3-211ENST00000622371 C7P10643 843 aa10.87□□□□□ -0.67
TMCO3-211ENST00000622371 PACS2Q86VP3 889 aa10.87□□□□□ -0.67
TMCO3-211ENST00000622371 KIAA1522Q9P206 1035 aaPredicted RBP10.87□□□□□ -0.67
TMCO3-211ENST00000622371 GABBR2O75899 941 aa10.86□□□□□ -0.67
TMCO3-211ENST00000622371 FUT2Q10981 343 aa10.86□□□□□ -0.67
TMCO3-211ENST00000622371 DEPDC4Q8N2C3 294 aa10.86□□□□□ -0.67
TMCO3-211ENST00000622371 TXNDC2Q86VQ3 553 aa10.85□□□□□ -0.67
TMCO3-211ENST00000622371 SLF2Q8IX21 1173 aa10.85□□□□□ -0.67
TMCO3-211ENST00000622371 RBM47A0AV96 593 aaKnown RBP10.85□□□□□ -0.67
TMCO3-211ENST00000622371 PTPREP23469 700 aa10.85□□□□□ -0.67
TMCO3-211ENST00000622371 SLAIN2Q9P270 581 aa10.85□□□□□ -0.67
TMCO3-211ENST00000622371 NOVA2Q9UNW9 492 aaKnown RBP10.85□□□□□ -0.67
TMCO3-211ENST00000622371 SCNN1AP37088 669 aa10.84□□□□□ -0.67
TMCO3-211ENST00000622371 NOM1Q5C9Z4 860 aaKnown RBP10.84□□□□□ -0.67
TMCO3-211ENST00000622371 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
TMCO3-211ENST00000622371 CCER1Q8TC90 406 aaPredicted RBP10.84□□□□□ -0.67
TMCO3-211ENST00000622371 SWT1Q5T5J6 900 aaKnown RBP10.84□□□□□ -0.67
TMCO3-211ENST00000622371 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
TMCO3-211ENST00000622371 DNAJC14Q6Y2X3 702 aaPredicted RBP10.83□□□□□ -0.68
TMCO3-211ENST00000622371 MRRFQ96E11 262 aaKnown RBP10.83□□□□□ -0.68
TMCO3-211ENST00000622371 IGSF5Q9NSI5 407 aa10.83□□□□□ -0.68
TMCO3-211ENST00000622371 B4GALNT3Q6L9W6 998 aa10.83□□□□□ -0.68
TMCO3-211ENST00000622371 HOXB3P14651 431 aaPredicted RBP10.82□□□□□ -0.68
TMCO3-211ENST00000622371 EIF4G2P78344 907 aaKnown RBP eCLIP10.82□□□□□ -0.68
TMCO3-211ENST00000622371 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 SERPINB4P48594 390 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
TMCO3-211ENST00000622371 CRTC2Q53ET0 693 aaPredicted RBP10.81□□□□□ -0.68
TMCO3-211ENST00000622371 ELOAQ14241 798 aaKnown RBP10.8□□□□□ -0.68
TMCO3-211ENST00000622371 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
TMCO3-211ENST00000622371 SKIP12755 728 aa10.79□□□□□ -0.68
TMCO3-211ENST00000622371 SSFA2P28290 1259 aa10.78□□□□□ -0.68
TMCO3-211ENST00000622371 FAM174AQ8TBP5 190 aa10.78□□□□□ -0.68
TMCO3-211ENST00000622371 KIAA1468Q9P260 1216 aa10.78□□□□□ -0.68
TMCO3-211ENST00000622371 USP17L5A8MUK1 530 aa10.78□□□□□ -0.68
TMCO3-211ENST00000622371 SEPT9Q9UHD8 586 aaPredicted RBP10.78□□□□□ -0.68
TMCO3-211ENST00000622371 PNMA1Q8ND90 353 aa10.77□□□□□ -0.68
TMCO3-211ENST00000622371 ZNF16P17020 682 aaPredicted RBP10.77□□□□□ -0.69
TMCO3-211ENST00000622371 NR1H3Q13133 447 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 DOK7Q18PE1 504 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L15C9J2P7 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L13C9JLJ4 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L12C9JPN9 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L11C9JVI0 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L21D6R901 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L18D6R9N7 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L22D6RA61 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L17D6RBQ6 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L19D6RCP7 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L20D6RJB6 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 USP17L24Q0WX57 530 aa10.76□□□□□ -0.69
TMCO3-211ENST00000622371 BCL2L13Q9BXK5 485 aa10.75□□□□□ -0.69
TMCO3-211ENST00000622371 CFHP08603 1231 aa10.74□□□□□ -0.69
TMCO3-211ENST00000622371 ARID4AP29374 1257 aaPredicted RBP10.74□□□□□ -0.69
TMCO3-211ENST00000622371 FAM69CQ0P6D2 419 aa10.74□□□□□ -0.69
TMCO3-211ENST00000622371 GIPC2Q8TF65 315 aa10.74□□□□□ -0.69
TMCO3-211ENST00000622371 MKRN1Q9UHC7 482 aaKnown RBP10.74□□□□□ -0.69
TMCO3-211ENST00000622371 SOWAHDA6NJG2 315 aa10.74□□□□□ -0.69
TMCO3-211ENST00000622371 NCOA4Q13772 614 aa10.73□□□□□ -0.69
TMCO3-211ENST00000622371 POTEIP0CG38 1075 aa10.72□□□□□ -0.69
TMCO3-211ENST00000622371 FAM196BA6NMK8 535 aa10.72□□□□□ -0.69
TMCO3-211ENST00000622371 RIMBP2O15034 1052 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms