RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
DDX1-208ENST00000621973 L3MBTL3Q96JM7 780 aaPredicted RBP8.95□□□□□ -0.98
DDX1-208ENST00000621973 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
DDX1-208ENST00000621973 UBXN4Q92575 508 aa8.95□□□□□ -0.98
DDX1-208ENST00000621973 MARCH6O60337 910 aa8.94□□□□□ -0.98
DDX1-208ENST00000621973 HDGFL1Q5TGJ6 251 aa8.94□□□□□ -0.98
DDX1-208ENST00000621973 OATP04181 439 aa8.93□□□□□ -0.98
DDX1-208ENST00000621973 RBM33Q96EV2 1170 aaKnown RBP8.93□□□□□ -0.98
DDX1-208ENST00000621973 BCL2L13Q9BXK5 485 aa8.93□□□□□ -0.98
DDX1-208ENST00000621973 CC2D2AQ9P2K1 1620 aa8.93□□□□□ -0.98
DDX1-208ENST00000621973 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
DDX1-208ENST00000621973 PCDHGA10Q9Y5H3 936 aa8.93□□□□□ -0.98
DDX1-208ENST00000621973 PLCG2P16885 1265 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 TBC1D2Q9BYX2 928 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 IGF1RP08069 1367 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
DDX1-208ENST00000621973 ZC3H6P61129 1189 aaKnown RBP8.92□□□□□ -0.98
DDX1-208ENST00000621973 SLAIN1Q8ND83 568 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 PXYLP1Q8TE99 480 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 PPP1R12CQ9BZL4 782 aa8.92□□□□□ -0.98
DDX1-208ENST00000621973 TMEM259Q4ZIN3 620 aa8.91□□□□□ -0.98
DDX1-208ENST00000621973 PPP2R2DQ66LE6 453 aa8.91□□□□□ -0.98
DDX1-208ENST00000621973 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
DDX1-208ENST00000621973 CUX2O14529 1486 aa8.91□□□□□ -0.98
DDX1-208ENST00000621973 CLSTN1O94985 981 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 SLC34A2O95436 690 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 DIXDC1Q155Q3 683 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 CDCA8Q53HL2 280 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 NAALADL2Q58DX5 795 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 ADGRG1Q9Y653 693 aa8.9□□□□□ -0.98
DDX1-208ENST00000621973 FGD5Q6ZNL6 1462 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 LOC102724159A0A0B4J2E5 919 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 PWP2Q15269 919 aaKnown RBP8.89□□□□□ -0.99
DDX1-208ENST00000621973 WWC1Q8IX03 1113 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 LIMD1Q9UGP4 676 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 ARHGAP35Q9NRY4 1499 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 TYW1BQ6NUM6 668 aa8.89□□□□□ -0.99
DDX1-208ENST00000621973 PADI6Q6TGC4 694 aa8.88□□□□□ -0.99
DDX1-208ENST00000621973 CARMIL1Q5VZK9 1371 aa8.88□□□□□ -0.99
DDX1-208ENST00000621973 PALM3A6NDB9 673 aaPredicted RBP8.88□□□□□ -0.99
DDX1-208ENST00000621973 RIPOR2Q9Y4F9 1068 aa8.88□□□□□ -0.99
DDX1-208ENST00000621973 FANCD2Q9BXW9 1451 aa8.87□□□□□ -0.99
DDX1-208ENST00000621973 KANK4Q5T7N3 995 aaPredicted RBP8.87□□□□□ -0.99
DDX1-208ENST00000621973 MICAL1Q8TDZ2 1067 aa8.87□□□□□ -0.99
DDX1-208ENST00000621973 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
DDX1-208ENST00000621973 CLCN6P51797 869 aa8.86□□□□□ -0.99
DDX1-208ENST00000621973 DIEXFQ68CQ4 756 aaKnown RBP8.86□□□□□ -0.99
DDX1-208ENST00000621973 CERKQ8TCT0 537 aa8.86□□□□□ -0.99
DDX1-208ENST00000621973 SOCS7O14512 581 aa8.86□□□□□ -0.99
DDX1-208ENST00000621973 RECKO95980 971 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 ERCC3P19447 782 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 PHLDB3Q6NSJ2 640 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 PPME1Q9Y570 386 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
DDX1-208ENST00000621973 RAB11FIP3O75154 756 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 ATG7O95352 703 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 DPH6Q7L8W6 267 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 RIC3Q7Z5B4 369 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 TTC13Q8NBP0 860 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 DNMBPQ6XZF7 1577 aa8.85□□□□□ -0.99
DDX1-208ENST00000621973 UCN2Q96RP3 112 aa8.84□□□□□ -0.99
DDX1-208ENST00000621973 RBM27Q9P2N5 1060 aaKnown RBP8.84□□□□□ -0.99
DDX1-208ENST00000621973 TAGLNQ01995 201 aaKnown RBP8.83□□□□□ -1
DDX1-208ENST00000621973 TUSC1Q2TAM9 212 aa8.83□□□□□ -1
DDX1-208ENST00000621973 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
DDX1-208ENST00000621973 JPH4Q96JJ6 628 aa8.83□□□□□ -1
DDX1-208ENST00000621973 MAP3K1Q13233 1512 aa8.83□□□□□ -1
DDX1-208ENST00000621973 FOSBP53539 338 aa8.83□□□□□ -1
DDX1-208ENST00000621973 SLC52A1Q9NWF4 448 aa8.83□□□□□ -1
DDX1-208ENST00000621973 SUGT1Q9Y2Z0 365 aa8.83□□□□□ -1
DDX1-208ENST00000621973 CLSPNQ9HAW4 1339 aa8.82□□□□□ -1
DDX1-208ENST00000621973 ABCA10Q8WWZ4 1543 aa8.82□□□□□ -1
DDX1-208ENST00000621973 TOPBP1Q92547 1522 aa8.82□□□□□ -1
DDX1-208ENST00000621973 PLEKHD1A6NEE1 506 aa8.82□□□□□ -1
DDX1-208ENST00000621973 SF3A1Q15459 793 aaKnown RBP8.82□□□□□ -1
DDX1-208ENST00000621973 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
DDX1-208ENST00000621973 C6orf132Q5T0Z8 1188 aa8.81□□□□□ -1
DDX1-208ENST00000621973 SPTLC1O15269 473 aa8.8□□□□□ -1
DDX1-208ENST00000621973 GPATCH3Q96I76 525 aa8.8□□□□□ -1
DDX1-208ENST00000621973 PRM3Q9NNZ6 103 aa8.8□□□□□ -1
DDX1-208ENST00000621973 TFIP11Q9UBB9 837 aaKnown RBP8.8□□□□□ -1
DDX1-208ENST00000621973 COLQQ9Y215 455 aaPredicted RBP8.8□□□□□ -1
DDX1-208ENST00000621973 C7P10643 843 aa8.8□□□□□ -1
DDX1-208ENST00000621973 POLA1P09884 1462 aaPredicted RBP8.8□□□□□ -1
DDX1-208ENST00000621973 RAD54L2Q9Y4B4 1467 aa8.8□□□□□ -1
DDX1-208ENST00000621973 NESP48681 1621 aa8.79□□□□□ -1
DDX1-208ENST00000621973 GPR37L1O60883 481 aa8.79□□□□□ -1
DDX1-208ENST00000621973 RSBN1LQ6PCB5 846 aaPredicted RBP8.79□□□□□ -1
DDX1-208ENST00000621973 RBM46Q8TBY0 533 aaKnown RBP8.79□□□□□ -1
DDX1-208ENST00000621973 CDCA7Q9BWT1 371 aaPredicted RBP8.79□□□□□ -1
DDX1-208ENST00000621973 DHX57Q6P158 1386 aaKnown RBP8.79□□□□□ -1
DDX1-208ENST00000621973 CCNB3Q8WWL7 1395 aa8.79□□□□□ -1
DDX1-208ENST00000621973 LAMC3Q9Y6N6 1575 aa8.79□□□□□ -1
DDX1-208ENST00000621973 KDM4FA0A1W2PPD8 638 aa8.79□□□□□ -1
DDX1-208ENST00000621973 SEC24BO95487 1268 aa8.79□□□□□ -1
DDX1-208ENST00000621973 VAMP1P23763 118 aa8.79□□□□□ -1
DDX1-208ENST00000621973 PCDHGA4Q9Y5G9 962 aa8.79□□□□□ -1
DDX1-208ENST00000621973 TIAM1Q13009 1591 aa8.78□□□□□ -1
DDX1-208ENST00000621973 CD46P15529 392 aa8.78□□□□□ -1
DDX1-208ENST00000621973 QPCTQ16769 361 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms