RNA–Protein interactions for RNA: ENST00000621961.1

PCDH7-208, Transcript of protocadherin 7, human

TSL 5

Gene PCDH7, Length 2,029 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH7-208	ENST00000621961	CLEC17A	Q6ZS10	378 aa		11.31	□□□□□ -0.6
PCDH7-208	ENST00000621961	CROCC2	H7BZ55	1655 aa		11.31	□□□□□ -0.6
PCDH7-208	ENST00000621961	CANX	P27824	592 aa	Known RBP	11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	CCDC94	Q9BW85	323 aa	Predicted RBP	11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	PCDHB15	Q9Y5E8	787 aa		11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	ARHGAP31	Q2M1Z3	1444 aa		11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	GRIN2A	Q12879	1464 aa		11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	PTPRG	P23470	1445 aa		11.3	□□□□□ -0.6
PCDH7-208	ENST00000621961	RBM25	P49756	843 aa	Known RBP	11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	PDLIM2	Q96JY6	352 aa		11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	KNSTRN	Q9Y448	316 aa		11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	NUP153	P49790	1475 aa	Known RBP	11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	NPC1L1	Q9UHC9	1359 aa		11.29	□□□□□ -0.6
PCDH7-208	ENST00000621961	APAF1	O14727	1248 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	MFAP1	P55081	439 aa	Known RBP	11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	PDE4C	Q08493	712 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	KLHL40	Q2TBA0	621 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	NBPF1	Q3BBV0	1214 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	SASS6	Q6UVJ0	657 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	ABCC10	Q5T3U5	1492 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	ADCY10	Q96PN6	1610 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	ZNF445	P59923	1031 aa		11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	GTPBP4	Q9BZE4	634 aa	Known RBP	11.28	□□□□□ -0.6
PCDH7-208	ENST00000621961	GOLGA6L22	H0YM25	854 aa		11.27	□□□□□ -0.61
PCDH7-208	ENST00000621961	ZSCAN20	P17040	1043 aa	Predicted RBP	11.27	□□□□□ -0.61
PCDH7-208	ENST00000621961	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.27	□□□□□ -0.61
PCDH7-208	ENST00000621961	MAGI2	Q86UL8	1455 aa		11.27	□□□□□ -0.61
PCDH7-208	ENST00000621961	WDR7	Q9Y4E6	1490 aa		11.27	□□□□□ -0.61
PCDH7-208	ENST00000621961	TNNT2	P45379	298 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	KIF20A	O95235	890 aa		11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	ZKSCAN5	Q9Y2L8	839 aa		11.26	□□□□□ -0.61
PCDH7-208	ENST00000621961	HSP90AB1	P08238	724 aa	Known RBP	11.25	□□□□□ -0.61
PCDH7-208	ENST00000621961	RARS	P54136	660 aa	Known RBP	11.25	□□□□□ -0.61
PCDH7-208	ENST00000621961	CCDC146	Q8IYE0	955 aa		11.25	□□□□□ -0.61
PCDH7-208	ENST00000621961	NUP160	Q12769	1436 aa		11.25	□□□□□ -0.61
PCDH7-208	ENST00000621961	SHANK2	Q9UPX8	1470 aa		11.25	□□□□□ -0.61
PCDH7-208	ENST00000621961	ASXL1	Q8IXJ9	1541 aa		11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	EIF2AK4	Q9P2K8	1649 aa	Known RBP	11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	XPC	Q01831	940 aa	Predicted RBP	11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	FAM135A	Q9P2D6	1515 aa		11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	DMRT2	Q9Y5R5	561 aa		11.24	□□□□□ -0.61
PCDH7-208	ENST00000621961	ARID3C	A6NKF2	412 aa		11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	TRO	Q12816	1431 aa	Predicted RBP	11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	RLBP1	P12271	317 aa		11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	PRDM10	Q9NQV6	1147 aa		11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	CCDC39	Q9UFE4	941 aa		11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	DDX49	Q9Y6V7	483 aa	Known RBP	11.23	□□□□□ -0.61
PCDH7-208	ENST00000621961	LETM1	O95202	739 aa	Predicted RBP	11.22	□□□□□ -0.61
PCDH7-208	ENST00000621961	WWC1	Q8IX03	1113 aa		11.22	□□□□□ -0.61
PCDH7-208	ENST00000621961	CCDC141	Q6ZP82	1450 aa		11.22	□□□□□ -0.61
PCDH7-208	ENST00000621961	SHROOM2	Q13796	1616 aa		11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	HDAC1	Q13547	482 aa	Predicted RBP	11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	CDCA8	Q53HL2	280 aa		11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	SYNM	O15061	1565 aa		11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	SYNJ2	O15056	1496 aa		11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	A2M	P01023	1474 aa		11.21	□□□□□ -0.61
PCDH7-208	ENST00000621961	BAG4	O95429	457 aa	Known RBP	11.21	□□□□□ -0.62
PCDH7-208	ENST00000621961	PPP4R3B	Q5MIZ7	849 aa		11.21	□□□□□ -0.62
PCDH7-208	ENST00000621961	MYRIP	Q8NFW9	859 aa		11.21	□□□□□ -0.62
PCDH7-208	ENST00000621961	MVP	Q14764	893 aa	Known RBP	11.2	□□□□□ -0.62
PCDH7-208	ENST00000621961	BBX	Q8WY36	941 aa	Predicted RBP	11.2	□□□□□ -0.62
PCDH7-208	ENST00000621961	RBSN	Q9H1K0	784 aa		11.2	□□□□□ -0.62
PCDH7-208	ENST00000621961		K7ELQ4	463 aa	Predicted RBP	11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	SSFA2	P28290	1259 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	GTF2E1	P29083	439 aa	Predicted RBP	11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	ZSCAN23	Q3MJ62	389 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	TAF3	Q5VWG9	929 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	STAC3	Q96MF2	364 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	C9orf84	Q5VXU9	1444 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	KANK1	Q14678	1352 aa		11.19	□□□□□ -0.62
PCDH7-208	ENST00000621961	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	WDR63	Q8IWG1	891 aa		11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	PRIMPOL	Q96LW4	560 aa		11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	KIF2C	Q99661	725 aa		11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	CDC42BPA	Q5VT25	1732 aa		11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	CARMIL2	Q6F5E8	1435 aa		11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	PRG4	Q92954	1404 aa	Predicted RBP	11.18	□□□□□ -0.62
PCDH7-208	ENST00000621961	RNF17	Q9BXT8	1623 aa	Known RBP	11.17	□□□□□ -0.62
PCDH7-208	ENST00000621961	TNN	Q9UQP3	1299 aa		11.17	□□□□□ -0.62
PCDH7-208	ENST00000621961	PLB1	Q6P1J6	1458 aa		11.17	□□□□□ -0.62
PCDH7-208	ENST00000621961	HMGN5	P82970	282 aa	Known RBP	11.16	□□□□□ -0.62
PCDH7-208	ENST00000621961	LMBRD1	Q9NUN5	540 aa		11.16	□□□□□ -0.62
PCDH7-208	ENST00000621961	NUCB2	P80303	420 aa		11.16	□□□□□ -0.62
PCDH7-208	ENST00000621961	ZNF777	Q9ULD5	760 aa	Predicted RBP	11.16	□□□□□ -0.62
PCDH7-208	ENST00000621961	PLA2R1	Q13018	1463 aa		11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	POLR3A	O14802	1390 aa	Predicted RBP	11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	PRIM1	P49642	420 aa	Known RBP	11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	KIAA2012	Q0VF49	1180 aa		11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	RGL3	Q3MIN7	710 aa		11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	ZKSCAN2	Q63HK3	967 aa		11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	CAVIN1	Q6NZI2	390 aa	Known RBP	11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	DZIP1L	Q8IYY4	767 aa	Known RBP	11.15	□□□□□ -0.62
PCDH7-208	ENST00000621961	ARID3A	Q99856	593 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms