RNA–Protein interactions for RNA: ENST00000620660.4

RYK-208, Transcript of receptor-like tyrosine kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RYK, Length 2,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RYK-208ENST00000620660 U2AF1L5P0DN76 240 aaPredicted RBP27.74■■■□□ 2.03
RYK-208ENST00000620660 U2AF1Q01081 240 aaKnown RBP eCLIP27.74■■■□□ 2.03
RYK-208ENST00000620660 ERVK-7P63135 1459 aa27.74■■■□□ 2.03
RYK-208ENST00000620660 KDM5AP29375 1690 aaKnown RBP27.74■■■□□ 2.03
RYK-208ENST00000620660 KIF3BO15066 747 aa27.74■■■□□ 2.03
RYK-208ENST00000620660 ITPRIPQ8IWB1 547 aa27.74■■■□□ 2.03
RYK-208ENST00000620660 MVPQ14764 893 aaKnown RBP27.72■■■□□ 2.03
RYK-208ENST00000620660 SMC4Q9NTJ3 1288 aa27.72■■■□□ 2.03
RYK-208ENST00000620660 FOXD4L1Q9NU39 408 aa27.72■■■□□ 2.03
RYK-208ENST00000620660 PLXNC1O60486 1568 aa27.72■■■□□ 2.03
RYK-208ENST00000620660 CHMP5Q9NZZ3 219 aa27.71■■■□□ 2.03
RYK-208ENST00000620660 NGEFQ8N5V2 710 aa27.71■■■□□ 2.03
RYK-208ENST00000620660 HSCBQ8IWL3 235 aa27.7■■■□□ 2.02
RYK-208ENST00000620660 DZIP1LQ8IYY4 767 aaKnown RBP27.7■■■□□ 2.02
RYK-208ENST00000620660 POLR3AO14802 1390 aaPredicted RBP27.7■■■□□ 2.02
RYK-208ENST00000620660 ZKSCAN2Q63HK3 967 aa27.69■■■□□ 2.02
RYK-208ENST00000620660 SCAPERQ9BY12 1400 aa27.69■■■□□ 2.02
RYK-208ENST00000620660 UGGT1Q9NYU2 1555 aa27.68■■■□□ 2.02
RYK-208ENST00000620660 CLTCL1P53675 1640 aa27.68■■■□□ 2.02
RYK-208ENST00000620660 TMEM132EQ6IEE7 984 aa27.68■■■□□ 2.02
RYK-208ENST00000620660 U2SURPO15042 1029 aaKnown RBP27.66■■■□□ 2.02
RYK-208ENST00000620660 FSD2A1L4K1 749 aa27.66■■■□□ 2.02
RYK-208ENST00000620660 MYH16Q9H6N6 1097 aa27.66■■■□□ 2.02
RYK-208ENST00000620660 CEP152O94986 1710 aa27.65■■■□□ 2.02
RYK-208ENST00000620660 SPHKAPQ2M3C7 1700 aa27.65■■■□□ 2.02
RYK-208ENST00000620660 CFAP53Q96M91 514 aa27.64■■■□□ 2.02
RYK-208ENST00000620660 EXOSC9Q06265 439 aaKnown RBP27.64■■■□□ 2.02
RYK-208ENST00000620660 WDR63Q8IWG1 891 aa27.64■■■□□ 2.01
RYK-208ENST00000620660 SAFB2Q14151 953 aaKnown RBP eCLIP27.63■■■□□ 2.01
RYK-208ENST00000620660 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
RYK-208ENST00000620660 TRPM2O94759 1503 aa27.62■■■□□ 2.01
RYK-208ENST00000620660 TRIM27P14373 513 aa27.62■■■□□ 2.01
RYK-208ENST00000620660 LNPKQ9C0E8 428 aa27.61■■■□□ 2.01
RYK-208ENST00000620660 GRPEL1Q9HAV7 217 aa27.61■■■□□ 2.01
RYK-208ENST00000620660 HSP90AA1P07900 732 aaKnown RBP27.6■■■□□ 2.01
RYK-208ENST00000620660 MRE11P49959 708 aa27.58■■■□□ 2.01
RYK-208ENST00000620660 HSP90AB1P08238 724 aaKnown RBP27.58■■■□□ 2.01
RYK-208ENST00000620660 SSH1Q8WYL5 1049 aa27.58■■■□□ 2.01
RYK-208ENST00000620660 KANK1Q14678 1352 aa27.58■■■□□ 2.01
RYK-208ENST00000620660 CLCN1P35523 988 aa27.57■■■□□ 2
RYK-208ENST00000620660 AAMPQ13685 434 aa27.56■■■□□ 2
RYK-208ENST00000620660 STAC3Q96MF2 364 aa27.56■■■□□ 2
RYK-208ENST00000620660 NOB1Q9ULX3 412 aaKnown RBP27.56■■■□□ 2
RYK-208ENST00000620660 PLCH2O75038 1416 aa27.56■■■□□ 2
RYK-208ENST00000620660 RTEL1-TNFRSF6BF6WH68 1400 aa27.55■■■□□ 2
RYK-208ENST00000620660 TMEM57Q8N5G2 664 aa27.54■■■□□ 2
RYK-208ENST00000620660 TRIM44Q96DX7 344 aaPredicted RBP27.54■■■□□ 2
RYK-208ENST00000620660 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
RYK-208ENST00000620660 ERBB4Q15303 1308 aa27.54■■■□□ 2
RYK-208ENST00000620660 PTPRTO14522 1441 aa27.54■■■□□ 2
RYK-208ENST00000620660 DDX11L8A8MPP1 907 aa27.54■■■□□ 2
RYK-208ENST00000620660 TNPO1Q92973 898 aaKnown RBP27.53■■■□□ 2
RYK-208ENST00000620660 SLC24A1O60721 1099 aa27.52■■■□□ 2
RYK-208ENST00000620660 VSIG10Q8N0Z9 540 aa27.51■■■□□ 2
RYK-208ENST00000620660 IQSEC2Q5JU85 1478 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 ABCA6Q8N139 1617 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 ERCC6L2Q5T890 1561 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 HSP90AA2PQ14568 343 aaPredicted RBP27.51■■□□□ 1.99
RYK-208ENST00000620660 GAS2L3Q86XJ1 694 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 DDX19BQ9UMR2 479 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 SHPRHQ149N8 1683 aa27.51■■□□□ 1.99
RYK-208ENST00000620660 ESPNB1AK53 854 aa27.5■■□□□ 1.99
RYK-208ENST00000620660 ATF7IPQ6VMQ6 1270 aa27.5■■□□□ 1.99
RYK-208ENST00000620660 NOS1P29475 1434 aa27.49■■□□□ 1.99
RYK-208ENST00000620660 ZNF692Q9BU19 519 aaPredicted RBP27.49■■□□□ 1.99
RYK-208ENST00000620660 C1orf115Q9H7X2 142 aa27.48■■□□□ 1.99
RYK-208ENST00000620660 CABP2Q9NPB3 220 aa27.48■■□□□ 1.99
RYK-208ENST00000620660 GGNBP2Q9H3C7 697 aa27.47■■□□□ 1.99
RYK-208ENST00000620660 ABCC1P33527 1531 aa27.47■■□□□ 1.99
RYK-208ENST00000620660 RBM42Q9BTD8 480 aaKnown RBP27.47■■□□□ 1.99
RYK-208ENST00000620660 CCDC27Q2M243 656 aa27.46■■□□□ 1.99
RYK-208ENST00000620660 CD2BP2O95400 341 aaKnown RBP27.45■■□□□ 1.99
RYK-208ENST00000620660 HDAC1Q13547 482 aaPredicted RBP27.45■■□□□ 1.98
RYK-208ENST00000620660 ZNF518AQ6AHZ1 1483 aa27.44■■□□□ 1.98
RYK-208ENST00000620660 GLIPR1L2Q4G1C9 344 aa27.44■■□□□ 1.98
RYK-208ENST00000620660 ZMYM3Q14202 1370 aa27.44■■□□□ 1.98
RYK-208ENST00000620660 MAP3K4Q9Y6R4 1608 aa27.44■■□□□ 1.98
RYK-208ENST00000620660 TMPOP42166 694 aaKnown RBP27.43■■□□□ 1.98
RYK-208ENST00000620660 ANKRD45Q5TZF3 282 aa27.43■■□□□ 1.98
RYK-208ENST00000620660 SMC5Q8IY18 1101 aa27.42■■□□□ 1.98
RYK-208ENST00000620660 GBP4Q96PP9 640 aa27.42■■□□□ 1.98
RYK-208ENST00000620660 RIPK4P57078 832 aa27.41■■□□□ 1.98
RYK-208ENST00000620660 TRIM35Q9UPQ4 493 aa27.4■■□□□ 1.98
RYK-208ENST00000620660 CHD1LQ86WJ1 897 aa27.39■■□□□ 1.97
RYK-208ENST00000620660 ZBTB40Q9NUA8 1239 aa27.39■■□□□ 1.97
RYK-208ENST00000620660 STK26Q9P289 416 aa27.39■■□□□ 1.97
RYK-208ENST00000620660 ZFYVE16Q7Z3T8 1539 aa27.38■■□□□ 1.97
RYK-208ENST00000620660 ELL2O00472 640 aaPredicted RBP27.38■■□□□ 1.97
RYK-208ENST00000620660 CFAP65Q6ZU64 1925 aaKnown RBP27.38■■□□□ 1.97
RYK-208ENST00000620660 SSFA2P28290 1259 aa27.37■■□□□ 1.97
RYK-208ENST00000620660 GGT6Q6P531 493 aa27.37■■□□□ 1.97
RYK-208ENST00000620660 NUCB1Q02818 461 aa27.36■■□□□ 1.97
RYK-208ENST00000620660 TET3O43151 1660 aa27.35■■□□□ 1.97
RYK-208ENST00000620660 NCLP19338 710 aaKnown RBP27.35■■□□□ 1.97
RYK-208ENST00000620660 RBM25P49756 843 aaKnown RBP27.35■■□□□ 1.97
RYK-208ENST00000620660 SRPK2P78362 688 aaKnown RBP27.35■■□□□ 1.97
RYK-208ENST00000620660 CD109Q6YHK3 1445 aa27.34■■□□□ 1.97
RYK-208ENST00000620660 PKNOX2Q96KN3 472 aa27.34■■□□□ 1.97
RYK-208ENST00000620660 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
RYK-208ENST00000620660 MYOM2P54296 1465 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms