RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 ABCC11Q96J66 1382 aa20.83■□□□□ 0.92
COPS7B-224ENST00000620578 CDK19Q9BWU1 502 aa20.82■□□□□ 0.92
COPS7B-224ENST00000620578 SBNO2Q9Y2G9 1366 aa20.82■□□□□ 0.92
COPS7B-224ENST00000620578 EVC2Q86UK5 1308 aa20.82■□□□□ 0.92
COPS7B-224ENST00000620578 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
COPS7B-224ENST00000620578 MED14O60244 1454 aa20.79■□□□□ 0.92
COPS7B-224ENST00000620578 TBX22Q9Y458 520 aa20.79■□□□□ 0.92
COPS7B-224ENST00000620578 KCNA6P17658 529 aa20.78■□□□□ 0.92
COPS7B-224ENST00000620578 MYOM1P52179 1685 aa20.78■□□□□ 0.92
COPS7B-224ENST00000620578 CCER2I3L3R5 266 aa20.78■□□□□ 0.92
COPS7B-224ENST00000620578 KNSTRNQ9Y448 316 aa20.77■□□□□ 0.92
COPS7B-224ENST00000620578 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
COPS7B-224ENST00000620578 FAM9BQ8IZU0 186 aa20.75■□□□□ 0.91
COPS7B-224ENST00000620578 CABP1Q9NZU7 370 aa20.75■□□□□ 0.91
COPS7B-224ENST00000620578 AMER1Q5JTC6 1135 aaPredicted RBP20.74■□□□□ 0.91
COPS7B-224ENST00000620578 SLC24A1O60721 1099 aa20.72■□□□□ 0.91
COPS7B-224ENST00000620578 ZNF142P52746 1687 aaPredicted RBP20.72■□□□□ 0.91
COPS7B-224ENST00000620578 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
COPS7B-224ENST00000620578 TNNT2P45379 298 aaPredicted RBP20.7■□□□□ 0.9
COPS7B-224ENST00000620578 KTN1Q86UP2 1357 aaKnown RBP20.7■□□□□ 0.9
COPS7B-224ENST00000620578 DLC1Q96QB1 1528 aa20.69■□□□□ 0.9
COPS7B-224ENST00000620578 TECPR2O15040 1411 aa20.69■□□□□ 0.9
COPS7B-224ENST00000620578 PRR36Q9H6K5 1346 aa20.67■□□□□ 0.9
COPS7B-224ENST00000620578 NSD3Q9BZ95 1437 aa20.67■□□□□ 0.9
COPS7B-224ENST00000620578 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
COPS7B-224ENST00000620578 NPHP4O75161 1426 aaPredicted RBP20.67■□□□□ 0.9
COPS7B-224ENST00000620578 NUDT16Q96DE0 195 aaKnown RBP20.67■□□□□ 0.9
COPS7B-224ENST00000620578 PARD3Q8TEW0 1356 aa20.66■□□□□ 0.9
COPS7B-224ENST00000620578 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
COPS7B-224ENST00000620578 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
COPS7B-224ENST00000620578 RALBP1Q15311 655 aa20.65■□□□□ 0.9
COPS7B-224ENST00000620578 CPS1P31327 1500 aa20.64■□□□□ 0.9
COPS7B-224ENST00000620578 SIRT1Q96EB6 747 aa20.64■□□□□ 0.9
COPS7B-224ENST00000620578 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.89
COPS7B-224ENST00000620578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
COPS7B-224ENST00000620578 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
COPS7B-224ENST00000620578 GGNBP2Q9H3C7 697 aa20.62■□□□□ 0.89
COPS7B-224ENST00000620578 CD163L1Q9NR16 1453 aa20.62■□□□□ 0.89
COPS7B-224ENST00000620578 FBLN1P23142 703 aa20.61■□□□□ 0.89
COPS7B-224ENST00000620578 KNDC1Q76NI1 1749 aa20.61■□□□□ 0.89
COPS7B-224ENST00000620578 PMFBP1Q8TBY8 1022 aa20.61■□□□□ 0.89
COPS7B-224ENST00000620578 ATAD2Q6PL18 1390 aa20.61■□□□□ 0.89
COPS7B-224ENST00000620578 PUS7Q96PZ0 661 aaKnown RBP20.6■□□□□ 0.89
COPS7B-224ENST00000620578 ANKRD36BQ8N2N9 1353 aa20.6■□□□□ 0.89
COPS7B-224ENST00000620578 PPP2R1AP30153 589 aa20.6■□□□□ 0.89
COPS7B-224ENST00000620578 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.89
COPS7B-224ENST00000620578 HNRNPUQ00839 825 aaKnown RBP eCLIP20.58■□□□□ 0.89
COPS7B-224ENST00000620578 ZRANB1Q9UGI0 708 aa20.58■□□□□ 0.89
COPS7B-224ENST00000620578 CCDC61Q9Y6R9 512 aa20.58■□□□□ 0.89
COPS7B-224ENST00000620578 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.88
COPS7B-224ENST00000620578 LMTK3Q96Q04 1460 aa20.58■□□□□ 0.88
COPS7B-224ENST00000620578 NLRP13Q86W25 1043 aa20.57■□□□□ 0.88
COPS7B-224ENST00000620578 TERF2IPQ9NYB0 399 aa20.57■□□□□ 0.88
COPS7B-224ENST00000620578 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
COPS7B-224ENST00000620578 C14orf37Q86TY3 774 aa20.56■□□□□ 0.88
COPS7B-224ENST00000620578 MORC1Q86VD1 984 aa20.56■□□□□ 0.88
COPS7B-224ENST00000620578 XRN1Q8IZH2 1706 aaKnown RBP20.55■□□□□ 0.88
COPS7B-224ENST00000620578 PTCH1Q13635 1447 aa20.55■□□□□ 0.88
COPS7B-224ENST00000620578 FYB1O15117 783 aa20.55■□□□□ 0.88
COPS7B-224ENST00000620578 CHD2O14647 1828 aaKnown RBP20.55■□□□□ 0.88
COPS7B-224ENST00000620578 CENPBP07199 599 aaPredicted RBP20.54■□□□□ 0.88
COPS7B-224ENST00000620578 HDGFL2Q7Z4V5 671 aaPredicted RBP20.54■□□□□ 0.88
COPS7B-224ENST00000620578 ATP7BP35670 1465 aa20.54■□□□□ 0.88
COPS7B-224ENST00000620578 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
COPS7B-224ENST00000620578 PIK3R4Q99570 1358 aa20.53■□□□□ 0.88
COPS7B-224ENST00000620578 PROSER2Q86WR7 435 aaPredicted RBP20.53■□□□□ 0.88
COPS7B-224ENST00000620578 ACEP12821 1306 aa20.52■□□□□ 0.88
COPS7B-224ENST00000620578 NME9Q86XW9 330 aa20.52■□□□□ 0.87
COPS7B-224ENST00000620578 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
COPS7B-224ENST00000620578 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
COPS7B-224ENST00000620578 BRD4O60885 1362 aaPredicted RBP20.5■□□□□ 0.87
COPS7B-224ENST00000620578 NPC1L1Q9UHC9 1359 aa20.48■□□□□ 0.87
COPS7B-224ENST00000620578 NKTRP30414 1462 aaKnown RBP20.48■□□□□ 0.87
COPS7B-224ENST00000620578 NINLQ9Y2I6 1382 aa20.47■□□□□ 0.87
COPS7B-224ENST00000620578 CPSF1Q10570 1443 aaKnown RBP20.47■□□□□ 0.87
COPS7B-224ENST00000620578 MTHFSP49914 203 aa20.46■□□□□ 0.87
COPS7B-224ENST00000620578 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
COPS7B-224ENST00000620578 ZNF335Q9H4Z2 1342 aaPredicted RBP20.46■□□□□ 0.87
COPS7B-224ENST00000620578 NGDNQ8NEJ9 315 aaKnown RBP20.46■□□□□ 0.87
COPS7B-224ENST00000620578 STRCQ7RTU9 1775 aa20.45■□□□□ 0.86
COPS7B-224ENST00000620578 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
COPS7B-224ENST00000620578 ADAMTS8Q9UP79 889 aa20.45■□□□□ 0.86
COPS7B-224ENST00000620578 SOX12O15370 315 aa20.45■□□□□ 0.86
COPS7B-224ENST00000620578 NALCNQ8IZF0 1738 aa20.44■□□□□ 0.86
COPS7B-224ENST00000620578 STRCP1A6NGW2 1772 aa20.44■□□□□ 0.86
COPS7B-224ENST00000620578 ADGRB2O60241 1585 aa20.44■□□□□ 0.86
COPS7B-224ENST00000620578 PLEKHG5O94827 1062 aa20.44■□□□□ 0.86
COPS7B-224ENST00000620578 NUTM2GQ5VZR2 741 aa20.44■□□□□ 0.86
COPS7B-224ENST00000620578 PLEKHG3A1L390 1219 aa20.43■□□□□ 0.86
COPS7B-224ENST00000620578 XPCQ01831 940 aaPredicted RBP20.43■□□□□ 0.86
COPS7B-224ENST00000620578 ESCO1Q5FWF5 840 aa20.43■□□□□ 0.86
COPS7B-224ENST00000620578 PPM1GO15355 546 aaPredicted RBP20.42■□□□□ 0.86
COPS7B-224ENST00000620578 TMEM94Q12767 1356 aa20.42■□□□□ 0.86
COPS7B-224ENST00000620578 CDC42BPGQ6DT37 1551 aa20.39■□□□□ 0.86
COPS7B-224ENST00000620578 TTC21BQ7Z4L5 1316 aa20.39■□□□□ 0.86
COPS7B-224ENST00000620578 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
COPS7B-224ENST00000620578 DDX17Q92841 729 aaKnown RBP20.39■□□□□ 0.85
COPS7B-224ENST00000620578 ADGRL3Q9HAR2 1447 aa20.39■□□□□ 0.85
COPS7B-224ENST00000620578 RRS1Q15050 365 aaKnown RBP20.38■□□□□ 0.85
COPS7B-224ENST00000620578 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms