RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 WAPLQ7Z5K2 1190 aa26.98■■□□□ 1.91
MMP28-207ENST00000619655 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
MMP28-207ENST00000619655 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
MMP28-207ENST00000619655 HDGFP51858 240 aaKnown RBP26.97■■□□□ 1.91
MMP28-207ENST00000619655 WDR43Q15061 677 aaKnown RBP eCLIP26.97■■□□□ 1.91
MMP28-207ENST00000619655 TNNT2P45379 298 aaPredicted RBP26.96■■□□□ 1.91
MMP28-207ENST00000619655 ADAMTS8Q9UP79 889 aa26.96■■□□□ 1.91
MMP28-207ENST00000619655 PUS7Q96PZ0 661 aaKnown RBP26.96■■□□□ 1.91
MMP28-207ENST00000619655 C3P01024 1663 aa26.95■■□□□ 1.91
MMP28-207ENST00000619655 SMG6Q86US8 1419 aaKnown RBP26.95■■□□□ 1.91
MMP28-207ENST00000619655 TMEM2Q9UHN6 1383 aa26.95■■□□□ 1.9
MMP28-207ENST00000619655 NUDCQ9Y266 331 aa26.95■■□□□ 1.9
MMP28-207ENST00000619655 METP08581 1390 aa26.95■■□□□ 1.9
MMP28-207ENST00000619655 MORC1Q86VD1 984 aa26.94■■□□□ 1.9
MMP28-207ENST00000619655 ANKRD36BQ8N2N9 1353 aa26.94■■□□□ 1.9
MMP28-207ENST00000619655 PLEKHH1Q9ULM0 1364 aa26.93■■□□□ 1.9
MMP28-207ENST00000619655 BLMP54132 1417 aaPredicted RBP26.92■■□□□ 1.9
MMP28-207ENST00000619655 CDK19Q9BWU1 502 aa26.91■■□□□ 1.9
MMP28-207ENST00000619655 CGNL1Q0VF96 1302 aa26.91■■□□□ 1.9
MMP28-207ENST00000619655 TXNDC2Q86VQ3 553 aa26.89■■□□□ 1.9
MMP28-207ENST00000619655 NLRP1Q9C000 1473 aa26.89■■□□□ 1.9
MMP28-207ENST00000619655 ATAD2Q6PL18 1390 aa26.89■■□□□ 1.9
MMP28-207ENST00000619655 A0A1W2PP64 1363 aa26.88■■□□□ 1.89
MMP28-207ENST00000619655 DLC1Q96QB1 1528 aa26.88■■□□□ 1.89
MMP28-207ENST00000619655 ABCC11Q96J66 1382 aa26.88■■□□□ 1.89
MMP28-207ENST00000619655 LTKP29376 864 aa26.87■■□□□ 1.89
MMP28-207ENST00000619655 USP32Q8NFA0 1604 aa26.85■■□□□ 1.89
MMP28-207ENST00000619655 NINLQ9Y2I6 1382 aa26.85■■□□□ 1.89
MMP28-207ENST00000619655 INSRP06213 1382 aa26.84■■□□□ 1.89
MMP28-207ENST00000619655 TERF2IPQ9NYB0 399 aa26.82■■□□□ 1.88
MMP28-207ENST00000619655 CABP1Q9NZU7 370 aa26.82■■□□□ 1.88
MMP28-207ENST00000619655 CCDC146Q8IYE0 955 aa26.82■■□□□ 1.88
MMP28-207ENST00000619655 EID1Q9Y6B2 187 aa26.81■■□□□ 1.88
MMP28-207ENST00000619655 CDCA7LQ96GN5 454 aa26.8■■□□□ 1.88
MMP28-207ENST00000619655 SLC26A8Q96RN1 970 aa26.79■■□□□ 1.88
MMP28-207ENST00000619655 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
MMP28-207ENST00000619655 CD163L1Q9NR16 1453 aa26.78■■□□□ 1.88
MMP28-207ENST00000619655 HDGFL2Q7Z4V5 671 aaPredicted RBP26.78■■□□□ 1.88
MMP28-207ENST00000619655 GGNBP2Q9H3C7 697 aa26.78■■□□□ 1.88
MMP28-207ENST00000619655 PLEKHG1Q9ULL1 1385 aa26.77■■□□□ 1.88
MMP28-207ENST00000619655 PDE3BQ13370 1112 aa26.76■■□□□ 1.87
MMP28-207ENST00000619655 DNAJC5Q9H3Z4 198 aa26.76■■□□□ 1.87
MMP28-207ENST00000619655 NSD2O96028 1365 aa26.76■■□□□ 1.87
MMP28-207ENST00000619655 KNDC1Q76NI1 1749 aa26.76■■□□□ 1.87
MMP28-207ENST00000619655 POLR3AO14802 1390 aaPredicted RBP26.75■■□□□ 1.87
MMP28-207ENST00000619655 MTHFSP49914 203 aa26.75■■□□□ 1.87
MMP28-207ENST00000619655 WASLO00401 505 aaPredicted RBP26.74■■□□□ 1.87
MMP28-207ENST00000619655 RIMS1Q86UR5 1692 aaKnown RBP26.73■■□□□ 1.87
MMP28-207ENST00000619655 TECPR2O15040 1411 aa26.73■■□□□ 1.87
MMP28-207ENST00000619655 CPS1P31327 1500 aa26.73■■□□□ 1.87
MMP28-207ENST00000619655 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
MMP28-207ENST00000619655 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
MMP28-207ENST00000619655 FAM135BQ49AJ0 1406 aa26.72■■□□□ 1.87
MMP28-207ENST00000619655 SLIT1O75093 1534 aa26.7■■□□□ 1.87
MMP28-207ENST00000619655 FYB1O15117 783 aa26.7■■□□□ 1.86
MMP28-207ENST00000619655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.86
MMP28-207ENST00000619655 APAF1O14727 1248 aa26.69■■□□□ 1.86
MMP28-207ENST00000619655 NCKAP5LQ9HCH0 1330 aa26.69■■□□□ 1.86
MMP28-207ENST00000619655 CFAP53Q96M91 514 aa26.68■■□□□ 1.86
MMP28-207ENST00000619655 ARHGAP23Q9P227 1491 aa26.68■■□□□ 1.86
MMP28-207ENST00000619655 PPIP5K1Q6PFW1 1433 aa26.68■■□□□ 1.86
MMP28-207ENST00000619655 SHPRHQ149N8 1683 aa26.67■■□□□ 1.86
MMP28-207ENST00000619655 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
MMP28-207ENST00000619655 NUDT16Q96DE0 195 aaKnown RBP26.66■■□□□ 1.86
MMP28-207ENST00000619655 RCAN3Q9UKA8 241 aa26.66■■□□□ 1.86
MMP28-207ENST00000619655 ERICH6BQ5W0A0 696 aa26.65■■□□□ 1.86
MMP28-207ENST00000619655 ATP7BP35670 1465 aa26.65■■□□□ 1.86
MMP28-207ENST00000619655 PTPRUQ92729 1446 aa26.64■■□□□ 1.86
MMP28-207ENST00000619655 RNF123Q5XPI4 1314 aa26.63■■□□□ 1.85
MMP28-207ENST00000619655 MED14O60244 1454 aa26.63■■□□□ 1.85
MMP28-207ENST00000619655 NUTM2FA1L443 756 aa26.63■■□□□ 1.85
MMP28-207ENST00000619655 KIF20BQ96Q89 1820 aa26.63■■□□□ 1.85
MMP28-207ENST00000619655 ANKRD26Q9UPS8 1709 aa26.63■■□□□ 1.85
MMP28-207ENST00000619655 PPP4R2Q9NY27 417 aa26.62■■□□□ 1.85
MMP28-207ENST00000619655 AMOTL2Q9Y2J4 779 aa26.62■■□□□ 1.85
MMP28-207ENST00000619655 CEP170BQ9Y4F5 1589 aaPredicted RBP26.62■■□□□ 1.85
MMP28-207ENST00000619655 CCDC61Q9Y6R9 512 aa26.61■■□□□ 1.85
MMP28-207ENST00000619655 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.6■■□□□ 1.85
MMP28-207ENST00000619655 GOLGA2Q08379 1002 aa26.59■■□□□ 1.85
MMP28-207ENST00000619655 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
MMP28-207ENST00000619655 ZNF521Q96K83 1311 aa26.59■■□□□ 1.85
MMP28-207ENST00000619655 PRR36Q9H6K5 1346 aa26.58■■□□□ 1.85
MMP28-207ENST00000619655 RRP1P56182 461 aaKnown RBP26.57■■□□□ 1.84
MMP28-207ENST00000619655 NEUROD2Q15784 382 aa26.57■■□□□ 1.84
MMP28-207ENST00000619655 B4GALNT3Q6L9W6 998 aa26.57■■□□□ 1.84
MMP28-207ENST00000619655 U2AF1L5P0DN76 240 aaPredicted RBP26.56■■□□□ 1.84
MMP28-207ENST00000619655 U2AF1Q01081 240 aaKnown RBP eCLIP26.56■■□□□ 1.84
MMP28-207ENST00000619655 CPSF1Q10570 1443 aaKnown RBP26.56■■□□□ 1.84
MMP28-207ENST00000619655 FBLN1P23142 703 aa26.55■■□□□ 1.84
MMP28-207ENST00000619655 RRP7AQ9Y3A4 280 aaKnown RBP26.55■■□□□ 1.84
MMP28-207ENST00000619655 CDC42BPGQ6DT37 1551 aa26.54■■□□□ 1.84
MMP28-207ENST00000619655 U2SURPO15042 1029 aaKnown RBP26.54■■□□□ 1.84
MMP28-207ENST00000619655 NME9Q86XW9 330 aa26.54■■□□□ 1.84
MMP28-207ENST00000619655 RUNDC1Q96C34 613 aa26.54■■□□□ 1.84
MMP28-207ENST00000619655 ADAMTSL3P82987 1691 aa26.54■■□□□ 1.84
MMP28-207ENST00000619655 PPM1GO15355 546 aaPredicted RBP26.53■■□□□ 1.84
MMP28-207ENST00000619655 DUSP27Q5VZP5 1158 aa26.53■■□□□ 1.84
MMP28-207ENST00000619655 EDC4Q6P2E9 1401 aaKnown RBP26.53■■□□□ 1.84
MMP28-207ENST00000619655 ADGRB2O60241 1585 aa26.52■■□□□ 1.84
MMP28-207ENST00000619655 SPINK5Q9NQ38 1064 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms