RNA–Protein interactions for RNA: ENST00000619640.3

C2orf48-202, Transcript of chromosome 2 open reading frame 48, humanhuman

TSL 1 (best)

Gene C2orf48, Length 480 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf48-202ENST00000619640 CADPS2Q86UW7 1296 aa21.91■■□□□ 1.1
C2orf48-202ENST00000619640 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
C2orf48-202ENST00000619640 ILDR1Q86SU0 546 aaPredicted RBP21.9■■□□□ 1.1
C2orf48-202ENST00000619640 PRAM1Q96QH2 718 aa21.89■■□□□ 1.09
C2orf48-202ENST00000619640 ROCK2O75116 1388 aaKnown RBP21.88■■□□□ 1.09
C2orf48-202ENST00000619640 ADGRB2O60241 1585 aa21.88■■□□□ 1.09
C2orf48-202ENST00000619640 MST1RQ04912 1400 aa21.88■■□□□ 1.09
C2orf48-202ENST00000619640 ATF3P18847 181 aa21.87■■□□□ 1.09
C2orf48-202ENST00000619640 SLAIN2Q9P270 581 aa21.86■■□□□ 1.09
C2orf48-202ENST00000619640 POGKQ9P215 609 aa21.84■■□□□ 1.09
C2orf48-202ENST00000619640 ROBO1Q9Y6N7 1651 aa21.83■■□□□ 1.09
C2orf48-202ENST00000619640 FMN2Q9NZ56 1722 aa21.83■■□□□ 1.08
C2orf48-202ENST00000619640 PIP4K2BP78356 416 aa21.82■■□□□ 1.08
C2orf48-202ENST00000619640 C1orf167Q5SNV9 1468 aa21.81■■□□□ 1.08
C2orf48-202ENST00000619640 SAFB2Q14151 953 aaKnown RBP eCLIP21.79■■□□□ 1.086e-6■■■□□ 16.1
C2orf48-202ENST00000619640 CENPJQ9HC77 1338 aaPredicted RBP21.79■■□□□ 1.08
C2orf48-202ENST00000619640 CARD11Q9BXL7 1154 aa21.78■■□□□ 1.08
C2orf48-202ENST00000619640 QRICH2Q9H0J4 1663 aa21.77■■□□□ 1.08
C2orf48-202ENST00000619640 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.07
C2orf48-202ENST00000619640 EIF3AQ14152 1382 aaKnown RBP21.76■■□□□ 1.07
C2orf48-202ENST00000619640 BRINP3Q76B58 766 aa21.76■■□□□ 1.07
C2orf48-202ENST00000619640 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
C2orf48-202ENST00000619640 MINK1Q8N4C8 1332 aaPredicted RBP21.75■■□□□ 1.07
C2orf48-202ENST00000619640 SBNO2Q9Y2G9 1366 aa21.74■■□□□ 1.07
C2orf48-202ENST00000619640 ANKARQ7Z5J8 1434 aa21.74■■□□□ 1.07
C2orf48-202ENST00000619640 AHDC1Q5TGY3 1603 aaPredicted RBP21.74■■□□□ 1.07
C2orf48-202ENST00000619640 WASLO00401 505 aaPredicted RBP21.74■■□□□ 1.07
C2orf48-202ENST00000619640 NHSL1Q5SYE7 1610 aa21.73■■□□□ 1.07
C2orf48-202ENST00000619640 HIRIP3Q9BW71 556 aaPredicted RBP21.73■■□□□ 1.07
C2orf48-202ENST00000619640 TULP4Q9NRJ4 1543 aa21.73■■□□□ 1.07
C2orf48-202ENST00000619640 HSPA1LP34931 641 aa21.72■■□□□ 1.07
C2orf48-202ENST00000619640 ORAI2Q96SN7 254 aa21.7■■□□□ 1.06
C2orf48-202ENST00000619640 RGPD8O14715 1765 aaPredicted RBP21.69■■□□□ 1.06
C2orf48-202ENST00000619640 PRR36Q9H6K5 1346 aa21.69■■□□□ 1.06
C2orf48-202ENST00000619640 ATP7BP35670 1465 aa21.69■■□□□ 1.06
C2orf48-202ENST00000619640 COL16A1Q07092 1604 aaPredicted RBP21.69■■□□□ 1.06
C2orf48-202ENST00000619640 KIF1AQ12756 1690 aa21.68■■□□□ 1.06
C2orf48-202ENST00000619640 PHLPP1O60346 1717 aa21.66■■□□□ 1.06
C2orf48-202ENST00000619640 USP47Q96K76 1375 aa21.66■■□□□ 1.06
C2orf48-202ENST00000619640 NUTM2FA1L443 756 aa21.66■■□□□ 1.06
C2orf48-202ENST00000619640 CDK19Q9BWU1 502 aa21.66■■□□□ 1.06
C2orf48-202ENST00000619640 ESCO1Q5FWF5 840 aa21.65■■□□□ 1.06
C2orf48-202ENST00000619640 TOPAZ1Q8N9V7 1692 aa21.65■■□□□ 1.06
C2orf48-202ENST00000619640 ITSN1Q15811 1721 aa21.64■■□□□ 1.06
C2orf48-202ENST00000619640 TESK2Q96S53 571 aa21.63■■□□□ 1.05
C2orf48-202ENST00000619640 SOS2Q07890 1332 aaPredicted RBP21.62■■□□□ 1.05
C2orf48-202ENST00000619640 ST20-MTHFSA0A0A6YYL1 179 aa21.62■■□□□ 1.05
C2orf48-202ENST00000619640 NUDT16Q96DE0 195 aaKnown RBP21.62■■□□□ 1.05
C2orf48-202ENST00000619640 EVC2Q86UK5 1308 aa21.61■■□□□ 1.05
C2orf48-202ENST00000619640 PXDNQ92626 1479 aa21.61■■□□□ 1.05
C2orf48-202ENST00000619640 PHF8Q9UPP1 1060 aa21.61■■□□□ 1.05
C2orf48-202ENST00000619640 SLC24A1O60721 1099 aa21.6■■□□□ 1.05
C2orf48-202ENST00000619640 NPHP3Q7Z494 1330 aa21.59■■□□□ 1.05
C2orf48-202ENST00000619640 DDX17Q92841 729 aaKnown RBP21.59■■□□□ 1.05
C2orf48-202ENST00000619640 CCDC61Q9Y6R9 512 aa21.59■■□□□ 1.05
C2orf48-202ENST00000619640 ZEB1P37275 1124 aaPredicted RBP21.57■■□□□ 1.04
C2orf48-202ENST00000619640 CABP2Q9NPB3 220 aa21.57■■□□□ 1.04
C2orf48-202ENST00000619640 FOXO3O43524 673 aa21.56■■□□□ 1.04
C2orf48-202ENST00000619640 SRPK2P78362 688 aaKnown RBP21.56■■□□□ 1.04
C2orf48-202ENST00000619640 SHPRHQ149N8 1683 aa21.56■■□□□ 1.04
C2orf48-202ENST00000619640 PLEKHG3A1L390 1219 aa21.55■■□□□ 1.04
C2orf48-202ENST00000619640 PUS7Q96PZ0 661 aaKnown RBP21.55■■□□□ 1.04
C2orf48-202ENST00000619640 POLR3AO14802 1390 aaPredicted RBP21.55■■□□□ 1.04
C2orf48-202ENST00000619640 JCADQ9P266 1359 aa21.55■■□□□ 1.04
C2orf48-202ENST00000619640 ATAD2Q6PL18 1390 aa21.53■■□□□ 1.04
C2orf48-202ENST00000619640 EIF4G2P78344 907 aaKnown RBP eCLIP21.53■■□□□ 1.046e-7■■■□□ 19.1
C2orf48-202ENST00000619640 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
C2orf48-202ENST00000619640 LRRC59Q96AG4 307 aaKnown RBP21.53■■□□□ 1.04
C2orf48-202ENST00000619640 PPIP5K1Q6PFW1 1433 aa21.53■■□□□ 1.04
C2orf48-202ENST00000619640 TRPM3Q9HCF6 1732 aaPredicted RBP21.52■■□□□ 1.03
C2orf48-202ENST00000619640 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
C2orf48-202ENST00000619640 KRT28Q7Z3Y7 464 aa21.5■■□□□ 1.03
C2orf48-202ENST00000619640 PNPLA6Q8IY17 1366 aa21.49■■□□□ 1.03
C2orf48-202ENST00000619640 DISP3Q9P2K9 1392 aa21.49■■□□□ 1.03
C2orf48-202ENST00000619640 COL22A1Q8NFW1 1626 aaPredicted RBP21.49■■□□□ 1.03
C2orf48-202ENST00000619640 XPCQ01831 940 aaPredicted RBP21.48■■□□□ 1.03
C2orf48-202ENST00000619640 ACEP12821 1306 aa21.48■■□□□ 1.03
C2orf48-202ENST00000619640 SPATA31A3Q5VYP0 1347 aa21.48■■□□□ 1.03
C2orf48-202ENST00000619640 HSPA5P11021 654 aaKnown RBP21.47■■□□□ 1.03
C2orf48-202ENST00000619640 TMF1P82094 1093 aa21.47■■□□□ 1.03
C2orf48-202ENST00000619640 NGDNQ8NEJ9 315 aaKnown RBP21.47■■□□□ 1.03
C2orf48-202ENST00000619640 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
C2orf48-202ENST00000619640 TNS3Q68CZ2 1445 aa21.46■■□□□ 1.03
C2orf48-202ENST00000619640 PSME1Q06323 249 aa21.46■■□□□ 1.03
C2orf48-202ENST00000619640 ALS2Q96Q42 1657 aa21.46■■□□□ 1.03
C2orf48-202ENST00000619640 CPSF1Q10570 1443 aaKnown RBP21.46■■□□□ 1.03
C2orf48-202ENST00000619640 SPATA31A6Q5VVP1 1343 aa21.45■■□□□ 1.02
C2orf48-202ENST00000619640 AKAP12Q02952 1782 aa21.45■■□□□ 1.02
C2orf48-202ENST00000619640 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
C2orf48-202ENST00000619640 CD163L1Q9NR16 1453 aa21.44■■□□□ 1.02
C2orf48-202ENST00000619640 CDCA8Q53HL2 280 aa21.43■■□□□ 1.02
C2orf48-202ENST00000619640 NINLQ9Y2I6 1382 aa21.43■■□□□ 1.02
C2orf48-202ENST00000619640 SSH2Q76I76 1423 aa21.43■■□□□ 1.02
C2orf48-202ENST00000619640 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
C2orf48-202ENST00000619640 LRP6O75581 1613 aa21.42■■□□□ 1.02
C2orf48-202ENST00000619640 USP6P35125 1406 aa21.42■■□□□ 1.02
C2orf48-202ENST00000619640 MON2Q7Z3U7 1717 aa21.41■■□□□ 1.02
C2orf48-202ENST00000619640 ARHGEF10O15013 1369 aa21.4■■□□□ 1.02
C2orf48-202ENST00000619640 NRKQ7Z2Y5 1582 aa21.4■■□□□ 1.02
C2orf48-202ENST00000619640 ZNF692Q9BU19 519 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms