RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 RGPD1P0DJD0 1748 aa8.82□□□□□ -1
CBWD3-215ENST00000619322 CD44P16070 742 aaKnown RBP8.82□□□□□ -1
CBWD3-215ENST00000619322 HFM1A2PYH4 1435 aa8.81□□□□□ -1
CBWD3-215ENST00000619322 CCDC61Q9Y6R9 512 aa8.81□□□□□ -1
CBWD3-215ENST00000619322 THSD7AQ9UPZ6 1657 aa8.81□□□□□ -1
CBWD3-215ENST00000619322 FAM208AQ9UK61 1670 aaKnown RBP8.8□□□□□ -1
CBWD3-215ENST00000619322 ASXL1Q8IXJ9 1541 aa8.79□□□□□ -1
CBWD3-215ENST00000619322 DCAF8Q5TAQ9 597 aa8.79□□□□□ -1
CBWD3-215ENST00000619322 KANK1Q14678 1352 aa8.79□□□□□ -1
CBWD3-215ENST00000619322 CICQ96RK0 1608 aaPredicted RBP8.79□□□□□ -1
CBWD3-215ENST00000619322 KIF15Q9NS87 1388 aa8.79□□□□□ -1
CBWD3-215ENST00000619322 SIRT1Q96EB6 747 aa8.79□□□□□ -1
CBWD3-215ENST00000619322 ARHGEF28Q8N1W1 1705 aaKnown RBP8.78□□□□□ -1
CBWD3-215ENST00000619322 SLC52A1Q9NWF4 448 aa8.78□□□□□ -1
CBWD3-215ENST00000619322 AKAP12Q02952 1782 aa8.77□□□□□ -1.01
CBWD3-215ENST00000619322 NRKQ7Z2Y5 1582 aa8.77□□□□□ -1.01
CBWD3-215ENST00000619322 LRP6O75581 1613 aa8.77□□□□□ -1.01
CBWD3-215ENST00000619322 C19orf67A6NJJ6 358 aa8.77□□□□□ -1.01
CBWD3-215ENST00000619322 ZRANB1Q9UGI0 708 aa8.77□□□□□ -1.01
CBWD3-215ENST00000619322 BRD4O60885 1362 aaPredicted RBP8.76□□□□□ -1.01
CBWD3-215ENST00000619322 GLI3P10071 1580 aa8.76□□□□□ -1.01
CBWD3-215ENST00000619322 COL14A1Q05707 1796 aaKnown RBP8.76□□□□□ -1.01
CBWD3-215ENST00000619322 USP32Q8NFA0 1604 aa8.76□□□□□ -1.01
CBWD3-215ENST00000619322 PLEKHG5O94827 1062 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 ZNF831Q5JPB2 1677 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 TNS1Q9HBL0 1735 aaKnown RBP8.75□□□□□ -1.01
CBWD3-215ENST00000619322 PARP4Q9UKK3 1724 aaKnown RBP8.75□□□□□ -1.01
CBWD3-215ENST00000619322 PCDHB8Q9UN66 801 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 PCDHB13Q9Y5F0 798 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 MAP3K13O43283 966 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 THEMISQ8N1K5 641 aaPredicted RBP8.75□□□□□ -1.01
CBWD3-215ENST00000619322 CFDP1Q9UEE9 299 aaPredicted RBP8.75□□□□□ -1.01
CBWD3-215ENST00000619322 RPGRIP1LQ68CZ1 1315 aa8.75□□□□□ -1.01
CBWD3-215ENST00000619322 CAMTA1Q9Y6Y1 1673 aa8.74□□□□□ -1.01
CBWD3-215ENST00000619322 HRCP23327 699 aa8.74□□□□□ -1.01
CBWD3-215ENST00000619322 ADGRL3Q9HAR2 1447 aa8.74□□□□□ -1.01
CBWD3-215ENST00000619322 ANKRD50Q9ULJ7 1429 aa8.74□□□□□ -1.01
CBWD3-215ENST00000619322 ANKARQ7Z5J8 1434 aa8.74□□□□□ -1.01
CBWD3-215ENST00000619322 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
CBWD3-215ENST00000619322 STAC3Q96MF2 364 aa8.73□□□□□ -1.01
CBWD3-215ENST00000619322 ADGRB1O14514 1584 aa8.73□□□□□ -1.01
CBWD3-215ENST00000619322 KCNH8Q96L42 1107 aa8.73□□□□□ -1.01
CBWD3-215ENST00000619322 PLEKHG2Q9H7P9 1386 aa8.73□□□□□ -1.01
CBWD3-215ENST00000619322 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
CBWD3-215ENST00000619322 SPATA31E1Q6ZUB1 1445 aa8.72□□□□□ -1.01
CBWD3-215ENST00000619322 ECM2O94769 699 aaPredicted RBP8.72□□□□□ -1.01
CBWD3-215ENST00000619322 AFAP1Q8N556 730 aa8.72□□□□□ -1.01
CBWD3-215ENST00000619322 PEAK1Q9H792 1746 aa8.71□□□□□ -1.01
CBWD3-215ENST00000619322 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.01
CBWD3-215ENST00000619322 FAM212AQ96EL1 285 aa8.71□□□□□ -1.01
CBWD3-215ENST00000619322 PXDNQ92626 1479 aa8.71□□□□□ -1.02
CBWD3-215ENST00000619322 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
CBWD3-215ENST00000619322 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
CBWD3-215ENST00000619322 DISP2A7MBM2 1401 aa8.7□□□□□ -1.02
CBWD3-215ENST00000619322 SOCS7O14512 581 aa8.7□□□□□ -1.02
CBWD3-215ENST00000619322 RIMS2Q9UQ26 1411 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 SPATA31A6Q5VVP1 1343 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.69□□□□□ -1.02
CBWD3-215ENST00000619322 TBX22Q9Y458 520 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 MON2Q7Z3U7 1717 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 AMER1Q5JTC6 1135 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-215ENST00000619322 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 ZBTB47Q9UFB7 747 aaPredicted RBP8.69□□□□□ -1.02
CBWD3-215ENST00000619322 PIK3C2GO75747 1445 aa8.69□□□□□ -1.02
CBWD3-215ENST00000619322 ATP7BP35670 1465 aa8.68□□□□□ -1.02
CBWD3-215ENST00000619322 KCNA6P17658 529 aa8.68□□□□□ -1.02
CBWD3-215ENST00000619322 KIF12Q96FN5 646 aa8.68□□□□□ -1.02
CBWD3-215ENST00000619322 NAIPQ13075 1403 aa8.67□□□□□ -1.02
CBWD3-215ENST00000619322 BCL9O00512 1426 aa8.67□□□□□ -1.02
CBWD3-215ENST00000619322 ANKLE2Q86XL3 938 aa8.66□□□□□ -1.02
CBWD3-215ENST00000619322 PTPRUQ92729 1446 aa8.66□□□□□ -1.02
CBWD3-215ENST00000619322 COL18A1P39060 1754 aa8.64□□□□□ -1.03
CBWD3-215ENST00000619322 SLIT3O75094 1523 aa8.63□□□□□ -1.03
CBWD3-215ENST00000619322 ATRNO75882 1429 aa8.63□□□□□ -1.03
CBWD3-215ENST00000619322 JCADQ9P266 1359 aa8.63□□□□□ -1.03
CBWD3-215ENST00000619322 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
CBWD3-215ENST00000619322 TULP4Q9NRJ4 1543 aa8.62□□□□□ -1.03
CBWD3-215ENST00000619322 EIF3AQ14152 1382 aaKnown RBP8.62□□□□□ -1.03
CBWD3-215ENST00000619322 HDGFP51858 240 aaKnown RBP8.62□□□□□ -1.03
CBWD3-215ENST00000619322 NUP188Q5SRE5 1749 aa8.61□□□□□ -1.03
CBWD3-215ENST00000619322 ANKRD30BQ9BXX2 1392 aa8.61□□□□□ -1.03
CBWD3-215ENST00000619322 GABBR2O75899 941 aa8.6□□□□□ -1.03
CBWD3-215ENST00000619322 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
CBWD3-215ENST00000619322 BRWD3Q6RI45 1802 aa8.6□□□□□ -1.03
CBWD3-215ENST00000619322 SBF2Q86WG5 1849 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 POTEIP0CG38 1075 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 SBNO1A3KN83 1393 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 PAPPAQ13219 1627 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 TOM1O60784 492 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 TSPY4P0CV99 314 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 TSPY10P0CW01 314 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 SLIT2O94813 1529 aa8.59□□□□□ -1.03
CBWD3-215ENST00000619322 HNRNPMP52272 730 aaKnown RBP eCLIP8.59□□□□□ -1.04
CBWD3-215ENST00000619322 ABCC11Q96J66 1382 aa8.58□□□□□ -1.04
CBWD3-215ENST00000619322 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-215ENST00000619322 GSE1Q14687 1217 aa8.58□□□□□ -1.04
CBWD3-215ENST00000619322 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
CBWD3-215ENST00000619322 ZFP91Q96JP5 570 aaPredicted RBP8.58□□□□□ -1.04
CBWD3-215ENST00000619322 LRPPRCP42704 1394 aaKnown RBP8.57□□□□□ -1.04
CBWD3-215ENST00000619322 ARID4BQ4LE39 1312 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms