RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
PSPC1-206ENST00000619300 BLMP54132 1417 aaPredicted RBP25.47■■□□□ 1.67
PSPC1-206ENST00000619300 ADAMTS8Q9UP79 889 aa25.47■■□□□ 1.67
PSPC1-206ENST00000619300 NINLQ9Y2I6 1382 aa25.47■■□□□ 1.67
PSPC1-206ENST00000619300 DLC1Q96QB1 1528 aa25.46■■□□□ 1.67
PSPC1-206ENST00000619300 BCANQ96GW7 911 aa25.46■■□□□ 1.67
PSPC1-206ENST00000619300 NLRP1Q9C000 1473 aa25.45■■□□□ 1.66
PSPC1-206ENST00000619300 ATAD2Q6PL18 1390 aa25.44■■□□□ 1.66
PSPC1-206ENST00000619300 WDR43Q15061 677 aaKnown RBP eCLIP25.44■■□□□ 1.66
PSPC1-206ENST00000619300 SETD1AO15047 1707 aaKnown RBP25.44■■□□□ 1.66
PSPC1-206ENST00000619300 CGNL1Q0VF96 1302 aa25.44■■□□□ 1.66
PSPC1-206ENST00000619300 NRXN3Q9Y4C0 1643 aa25.43■■□□□ 1.66
PSPC1-206ENST00000619300 MORC1Q86VD1 984 aa25.43■■□□□ 1.66
PSPC1-206ENST00000619300 UBR1Q8IWV7 1749 aa25.43■■□□□ 1.66
PSPC1-206ENST00000619300 METP08581 1390 aa25.43■■□□□ 1.66
PSPC1-206ENST00000619300 WAPLQ7Z5K2 1190 aa25.42■■□□□ 1.66
PSPC1-206ENST00000619300 CDK19Q9BWU1 502 aa25.42■■□□□ 1.66
PSPC1-206ENST00000619300 PDE3BQ13370 1112 aa25.41■■□□□ 1.66
PSPC1-206ENST00000619300 USP32Q8NFA0 1604 aa25.4■■□□□ 1.66
PSPC1-206ENST00000619300 SALL2Q9Y467 1007 aaPredicted RBP25.39■■□□□ 1.66
PSPC1-206ENST00000619300 SIRT1Q96EB6 747 aa25.38■■□□□ 1.65
PSPC1-206ENST00000619300 TERF2IPQ9NYB0 399 aa25.37■■□□□ 1.65
PSPC1-206ENST00000619300 PLEKHH1Q9ULM0 1364 aa25.37■■□□□ 1.65
PSPC1-206ENST00000619300 ERICH6BQ5W0A0 696 aa25.37■■□□□ 1.65
PSPC1-206ENST00000619300 C3P01024 1663 aa25.36■■□□□ 1.65
PSPC1-206ENST00000619300 NSD2O96028 1365 aa25.36■■□□□ 1.65
PSPC1-206ENST00000619300 LTKP29376 864 aa25.36■■□□□ 1.65
PSPC1-206ENST00000619300 IRX6P78412 446 aaPredicted RBP25.36■■□□□ 1.65
PSPC1-206ENST00000619300 A0A1W2PP64 1363 aa25.36■■□□□ 1.65
PSPC1-206ENST00000619300 POLR3AO14802 1390 aaPredicted RBP25.34■■□□□ 1.65
PSPC1-206ENST00000619300 TXNDC2Q86VQ3 553 aa25.34■■□□□ 1.65
PSPC1-206ENST00000619300 FER1L4A9Z1Z3 1794 aa25.34■■□□□ 1.65
PSPC1-206ENST00000619300 PLEKHG1Q9ULL1 1385 aa25.33■■□□□ 1.65
PSPC1-206ENST00000619300 PLPPR3Q6T4P5 718 aa25.33■■□□□ 1.65
PSPC1-206ENST00000619300 EID1Q9Y6B2 187 aa25.32■■□□□ 1.64
PSPC1-206ENST00000619300 TECPR2O15040 1411 aa25.32■■□□□ 1.64
PSPC1-206ENST00000619300 FAM135BQ49AJ0 1406 aa25.32■■□□□ 1.64
PSPC1-206ENST00000619300 TNNT2P45379 298 aaPredicted RBP25.32■■□□□ 1.64
PSPC1-206ENST00000619300 ADAMTS13Q76LX8 1427 aa25.31■■□□□ 1.64
PSPC1-206ENST00000619300 CABP1Q9NZU7 370 aa25.31■■□□□ 1.64
PSPC1-206ENST00000619300 HDGFL2Q7Z4V5 671 aaPredicted RBP25.3■■□□□ 1.64
PSPC1-206ENST00000619300 DNAJC5Q9H3Z4 198 aa25.3■■□□□ 1.64
PSPC1-206ENST00000619300 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
PSPC1-206ENST00000619300 CD163L1Q9NR16 1453 aa25.3■■□□□ 1.64
PSPC1-206ENST00000619300 WASLO00401 505 aaPredicted RBP25.29■■□□□ 1.64
PSPC1-206ENST00000619300 THEMISQ8N1K5 641 aaPredicted RBP25.29■■□□□ 1.64
PSPC1-206ENST00000619300 ARHGAP23Q9P227 1491 aa25.26■■□□□ 1.63
PSPC1-206ENST00000619300 SLIT1O75093 1534 aa25.26■■□□□ 1.63
PSPC1-206ENST00000619300 MTHFSP49914 203 aa25.26■■□□□ 1.63
PSPC1-206ENST00000619300 CDCA7LQ96GN5 454 aa25.26■■□□□ 1.63
PSPC1-206ENST00000619300 KNDC1Q76NI1 1749 aa25.26■■□□□ 1.63
PSPC1-206ENST00000619300 FYB1O15117 783 aa25.24■■□□□ 1.63
PSPC1-206ENST00000619300 CPS1P31327 1500 aa25.24■■□□□ 1.63
PSPC1-206ENST00000619300 MED14O60244 1454 aa25.24■■□□□ 1.63
PSPC1-206ENST00000619300 CCDC146Q8IYE0 955 aa25.22■■□□□ 1.63
PSPC1-206ENST00000619300 CFAP53Q96M91 514 aa25.22■■□□□ 1.63
PSPC1-206ENST00000619300 GGNBP2Q9H3C7 697 aa25.22■■□□□ 1.63
PSPC1-206ENST00000619300 ROBO2Q9HCK4 1378 aa25.22■■□□□ 1.63
PSPC1-206ENST00000619300 SLC26A8Q96RN1 970 aa25.21■■□□□ 1.63
PSPC1-206ENST00000619300 PPP4R2Q9NY27 417 aa25.2■■□□□ 1.63
PSPC1-206ENST00000619300 ATP7BP35670 1465 aa25.2■■□□□ 1.62
PSPC1-206ENST00000619300 ZNF521Q96K83 1311 aa25.2■■□□□ 1.62
PSPC1-206ENST00000619300 TBX22Q9Y458 520 aa25.2■■□□□ 1.62
PSPC1-206ENST00000619300 RCAN3Q9UKA8 241 aa25.19■■□□□ 1.62
PSPC1-206ENST00000619300 APAF1O14727 1248 aa25.19■■□□□ 1.62
PSPC1-206ENST00000619300 NUDT16Q96DE0 195 aaKnown RBP25.19■■□□□ 1.62
PSPC1-206ENST00000619300 NGEFQ8N5V2 710 aa25.17■■□□□ 1.62
PSPC1-206ENST00000619300 CCDC61Q9Y6R9 512 aa25.17■■□□□ 1.62
PSPC1-206ENST00000619300 PPIP5K1Q6PFW1 1433 aa25.15■■□□□ 1.62
PSPC1-206ENST00000619300 PTPRUQ92729 1446 aa25.15■■□□□ 1.62
PSPC1-206ENST00000619300 CPSF1Q10570 1443 aaKnown RBP25.14■■□□□ 1.62
PSPC1-206ENST00000619300 GOLGA2Q08379 1002 aa25.14■■□□□ 1.62
PSPC1-206ENST00000619300 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
PSPC1-206ENST00000619300 SHPRHQ149N8 1683 aa25.13■■□□□ 1.61
PSPC1-206ENST00000619300 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.12■■□□□ 1.61
PSPC1-206ENST00000619300 RUNDC1Q96C34 613 aa25.11■■□□□ 1.61
PSPC1-206ENST00000619300 RRP1P56182 461 aaKnown RBP25.1■■□□□ 1.61
PSPC1-206ENST00000619300 RIMS1Q86UR5 1692 aaKnown RBP25.1■■□□□ 1.61
PSPC1-206ENST00000619300 DUSP27Q5VZP5 1158 aa25.1■■□□□ 1.61
PSPC1-206ENST00000619300 ANKRD26Q9UPS8 1709 aa25.09■■□□□ 1.61
PSPC1-206ENST00000619300 EDC4Q6P2E9 1401 aaKnown RBP25.09■■□□□ 1.61
PSPC1-206ENST00000619300 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
PSPC1-206ENST00000619300 CEP170BQ9Y4F5 1589 aaPredicted RBP25.09■■□□□ 1.61
PSPC1-206ENST00000619300 SLFN5Q08AF3 891 aa25.08■■□□□ 1.61
PSPC1-206ENST00000619300 PRR36Q9H6K5 1346 aa25.08■■□□□ 1.61
PSPC1-206ENST00000619300 DIP2AQ14689 1571 aa25.07■■□□□ 1.6
PSPC1-206ENST00000619300 ZNF692Q9BU19 519 aaPredicted RBP25.07■■□□□ 1.6
PSPC1-206ENST00000619300 ADGRB2O60241 1585 aa25.07■■□□□ 1.6
PSPC1-206ENST00000619300 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.07■■□□□ 1.6
PSPC1-206ENST00000619300 TRMT2AQ8IZ69 625 aaKnown RBP25.06■■□□□ 1.6
PSPC1-206ENST00000619300 CDC42BPGQ6DT37 1551 aa25.05■■□□□ 1.6
PSPC1-206ENST00000619300 ADAMTSL3P82987 1691 aa25.05■■□□□ 1.6
PSPC1-206ENST00000619300 U2AF1L5P0DN76 240 aaPredicted RBP25.05■■□□□ 1.6
PSPC1-206ENST00000619300 U2AF1Q01081 240 aaKnown RBP eCLIP25.05■■□□□ 1.63e-8■□□□□ 10.5
PSPC1-206ENST00000619300 KIF20BQ96Q89 1820 aa25.04■■□□□ 1.6
PSPC1-206ENST00000619300 PTCH1Q13635 1447 aa25.04■■□□□ 1.6
PSPC1-206ENST00000619300 TCP11L2Q8N4U5 519 aa25.03■■□□□ 1.6
PSPC1-206ENST00000619300 PNPLA6Q8IY17 1366 aa25.02■■□□□ 1.6
PSPC1-206ENST00000619300 B4GALNT3Q6L9W6 998 aa25.02■■□□□ 1.6
PSPC1-206ENST00000619300 E9PSI1 815 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms