RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 ERLIN2O94905 339 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 RPGRIP1LQ68CZ1 1315 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 ATAD2BQ9ULI0 1458 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 ARGLU1Q9NWB6 273 aaPredicted RBP8.69□□□□□ -1.02
CSMD2-210ENST00000619121 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
CSMD2-210ENST00000619121 SMC2O95347 1197 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 THEMISQ8N1K5 641 aaPredicted RBP8.68□□□□□ -1.02
CSMD2-210ENST00000619121 KIF4AO95239 1232 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 KIF6Q6ZMV9 814 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 RAPGEF4Q8WZA2 1011 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 MYBBP1AQ9BQG0 1328 aaKnown RBP8.68□□□□□ -1.02
CSMD2-210ENST00000619121 EPRSP07814 1512 aaKnown RBP8.68□□□□□ -1.02
CSMD2-210ENST00000619121 IQCEQ6IPM2 695 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 TNNT3P45378 269 aaPredicted RBP8.68□□□□□ -1.02
CSMD2-210ENST00000619121 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 SRCIN1Q9C0H9 1055 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 JMYQ8N9B5 988 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 SMARCE1Q969G3 411 aa8.68□□□□□ -1.02
CSMD2-210ENST00000619121 VPS53Q5VIR6 699 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 GNAI1P63096 354 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 CPLX1O14810 134 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 ITPRIPQ8IWB1 547 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 DIAPH3Q9NSV4 1193 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 RUFY1Q96T51 708 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 INTS3Q68E01 1043 aaKnown RBP8.67□□□□□ -1.02
CSMD2-210ENST00000619121 PKD2Q13563 968 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 HOOK3Q86VS8 718 aa8.67□□□□□ -1.02
CSMD2-210ENST00000619121 RALYLQ86SE5 291 aaKnown RBP8.66□□□□□ -1.02
CSMD2-210ENST00000619121 DDX12PQ92771 950 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 MRC2Q9UBG0 1479 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 DNMBPQ6XZF7 1577 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 CT47A1Q5JQC4 288 aaPredicted RBP8.66□□□□□ -1.02
CSMD2-210ENST00000619121 SYCP1Q15431 976 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 ZNF652Q9Y2D9 606 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 NF2P35240 595 aa8.66□□□□□ -1.02
CSMD2-210ENST00000619121 CC2D1BQ5T0F9 858 aaKnown RBP8.65□□□□□ -1.02
CSMD2-210ENST00000619121 STIM1Q13586 685 aa8.65□□□□□ -1.02
CSMD2-210ENST00000619121 PYM1Q9BRP8 204 aaKnown RBP8.65□□□□□ -1.02
CSMD2-210ENST00000619121 LRRC45Q96CN5 670 aa8.65□□□□□ -1.02
CSMD2-210ENST00000619121 NCAPD3P42695 1498 aa8.65□□□□□ -1.02
CSMD2-210ENST00000619121 G3BP1Q13283 466 aaKnown RBP eCLIP8.65□□□□□ -1.03
CSMD2-210ENST00000619121 SETD1BQ9UPS6 1966 aaKnown RBP8.65□□□□□ -1.03
CSMD2-210ENST00000619121 FERMT1Q9BQL6 677 aa8.65□□□□□ -1.03
CSMD2-210ENST00000619121 AKNAQ7Z591 1439 aa8.65□□□□□ -1.03
CSMD2-210ENST00000619121 NBR1Q14596 966 aa8.65□□□□□ -1.03
CSMD2-210ENST00000619121 ZKSCAN2Q63HK3 967 aa8.65□□□□□ -1.03
CSMD2-210ENST00000619121 AK9Q5TCS8 1911 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 NAP1L5Q96NT1 182 aaPredicted RBP8.64□□□□□ -1.03
CSMD2-210ENST00000619121 CDKL5O76039 1030 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 TNIP1Q15025 636 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 FMNL3Q8IVF7 1028 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 GOLGA6L7A0A1B0GV03 622 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 POTEJP0CG39 1038 aa8.64□□□□□ -1.03
CSMD2-210ENST00000619121 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
CSMD2-210ENST00000619121 DNAJC2Q99543 621 aaKnown RBP8.63□□□□□ -1.03
CSMD2-210ENST00000619121 CNTROBQ8N137 903 aa8.63□□□□□ -1.03
CSMD2-210ENST00000619121 TOP2BQ02880 1626 aa8.63□□□□□ -1.03
CSMD2-210ENST00000619121 PLEKHO1Q53GL0 409 aaPredicted RBP8.63□□□□□ -1.03
CSMD2-210ENST00000619121 OLFM4Q6UX06 510 aa8.63□□□□□ -1.03
CSMD2-210ENST00000619121 MAP7D2Q96T17 732 aa8.63□□□□□ -1.03
CSMD2-210ENST00000619121 ZNHIT6Q9NWK9 470 aaKnown RBP8.63□□□□□ -1.03
CSMD2-210ENST00000619121 CWC15Q9P013 229 aaKnown RBP8.63□□□□□ -1.03
CSMD2-210ENST00000619121 IFIT2P09913 472 aaKnown RBP8.63□□□□□ -1.03
CSMD2-210ENST00000619121 NEUROD2Q15784 382 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 CCDC30Q5VVM6 783 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 PPP1R12BO60237 982 aaPredicted RBP8.62□□□□□ -1.03
CSMD2-210ENST00000619121 KCNH5Q8NCM2 988 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 POLA1P09884 1462 aaPredicted RBP8.62□□□□□ -1.03
CSMD2-210ENST00000619121 ATF7IPQ6VMQ6 1270 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 NACAP1Q9BZK3 213 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 THOC2Q8NI27 1593 aaKnown RBP8.62□□□□□ -1.03
CSMD2-210ENST00000619121 MCM3P25205 808 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 FILIP1LQ4L180 1135 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 WASF1Q92558 559 aa8.62□□□□□ -1.03
CSMD2-210ENST00000619121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.62□□□□□ -1.03
CSMD2-210ENST00000619121 CETN2P41208 172 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 FGFR1OPO95684 399 aaKnown RBP8.61□□□□□ -1.03
CSMD2-210ENST00000619121 EHMT1Q9H9B1 1298 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 RAB3GAP2Q9H2M9 1393 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 CCDC146Q8IYE0 955 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 BMP2KQ9NSY1 1161 aaPredicted RBP8.61□□□□□ -1.03
CSMD2-210ENST00000619121 TEX14Q8IWB6 1497 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 GIGYF2Q6Y7W6 1299 aaKnown RBP8.61□□□□□ -1.03
CSMD2-210ENST00000619121 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 CEP131Q9UPN4 1083 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 MLECQ14165 292 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 EIF2AK4Q9P2K8 1649 aaKnown RBP8.61□□□□□ -1.03
CSMD2-210ENST00000619121 HSP90B2PQ58FF3 399 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 KIF1BO60333 1816 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 HSP90AB3PQ58FF7 597 aa8.61□□□□□ -1.03
CSMD2-210ENST00000619121 KIF20AO95235 890 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 RAB34Q9BZG1 259 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 NESP48681 1621 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 EZRP15311 586 aaKnown RBP8.6□□□□□ -1.03
CSMD2-210ENST00000619121 CASTP20810 708 aaKnown RBP8.6□□□□□ -1.03
CSMD2-210ENST00000619121 B4DLN1 442 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 MRPL12P52815 198 aaKnown RBP8.6□□□□□ -1.03
CSMD2-210ENST00000619121 GNAI3P08754 354 aa8.6□□□□□ -1.03
CSMD2-210ENST00000619121 CCDC158Q5M9N0 1113 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms